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CSPI01G08190 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G08190
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH-ubiquinone reductase complex 1 MLRQ subunit
Genome locationChr1:5163213..5164936
RNA-Seq ExpressionCSPI01G08190
SyntenyCSPI01G08190
Gene Ontology termsGO:0000380 - alternative mRNA splicing, via spliceosome (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64280.1 hypothetical protein Csa_013651 [Cucumis sativus]4.9e-47100Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
XP_004152455.2 uncharacterized protein LOC101218501 isoform X2 [Cucumis sativus]4.9e-47100Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
XP_008437938.1 PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo]2.7e-4596.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
XP_031736912.1 uncharacterized protein LOC101218501 isoform X1 [Cucumis sativus]1.6e-4597.92Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEV--RVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEV  RVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEV--RVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
XP_038893556.1 uncharacterized protein LOC120082448 [Benincasa hispida]1.6e-4595.74Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
TrEMBL top hitse value%identityAlignment
A0A0A0LQT3 Uncharacterized protein2.4e-47100Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
A0A1S3AVT0 uncharacterized protein LOC1034832121.3e-4596.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
A0A5A7UIX5 Uncharacterized protein1.3e-4596.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
A0A6J1C941 uncharacterized protein LOC1110090921.3e-4291.49Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPS+ +SRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENR+AGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
A0A6J1E888 uncharacterized protein LOC1114317084.6e-4392.55Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPS+ ++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVTKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein3.4e-2249.4Show/hide
Query:  LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFT
        + RW+RPEVYPL  A+G    +  FQL RN  +NP+ R+ KE+R  G+L+N  EGEKY++H  RK++R + P++MPS+N FF+
Subjt:  LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFT
AT3G48140.1 B12D protein1.1e-3683.33Show/hide
Query:  SRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP
        SRWLRPEVYPLFAA GVAVGIC F LIRNI  NPEVR TKENRAAG+LDN AEGEKY E+FLRKFVRNK PEIMP +N FFTDP
Subjt:  SRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCTCTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGTGGATTTCAGTTAATCCGTAACAT
CTGCATCAATCCTGAAGTCAGAGTTACCAAGGAGAATAGGGCTGCTGGAGTGTTGGATAACTTTGCTGAGGGAGAGAAGTATTCTGAACATTTCCTGAGGAAATTCGTAC
GCAACAAGTCCCCAGAAATTATGCCATCAATCAACAACTTTTTCACTGACCCAAATCGAAACTAA
mRNA sequenceShow/hide mRNA sequence
CTTACGATCCCGTGGCCGCAACTCAAACATTTGTCCACTTGTCTGTTAATAATTGGCCGAATGGGCAGTAAAAAGCCGCATGCATTTTTTTATTGGGCAAATAAAAAATA
TATATATATAATCCCGAAATTCTCATCTTCTTCCCCCCACAAACTCTCCGATTCAGCCGCGTCTCAGCCTCTTCGATCCGCTTCCTCCGCCGATATTCATCAATGGCTCC
GTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCTCTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGTGGATTTCAGTTAATCCGTAACATCTGCATCA
ATCCTGAAGTCAGAGTTACCAAGGAGAATAGGGCTGCTGGAGTGTTGGATAACTTTGCTGAGGGAGAGAAGTATTCTGAACATTTCCTGAGGAAATTCGTACGCAACAAG
TCCCCAGAAATTATGCCATCAATCAACAACTTTTTCACTGACCCAAATCGAAACTAAGAAGGCTATGAATGAATTACACATTAGATTGGATGTAGATTTGAATTTGAATT
TGAATTGTTGGTGGGTTGGTGGCTGTAAAAGTTTAAACTATGCTCTGCTTTTACGTTTGCTTTTATTGTTCATTTGAGAAAGTTTGAAAAACAATGGATCGATAAAAAAT
AAACCATTGTGATCCAAAATTTAATTTCAGATATCATGAAACTCTGACTTTCATCTTTGCACATTTTGATGGATATGCGCTTTATGTTATAACTGTGAAATGGAGCTCTA
GAATTTTGGACTTTTTGAGAATATTACTATGATATATTTGTAAAACTAT
Protein sequenceShow/hide protein sequence
MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN