; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G08280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G08280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGibberellin-regulated protein 2
Genome locationChr1:5224741..5226455
RNA-Seq ExpressionCSPI01G08280
SyntenyCSPI01G08280
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055209.1 snakin-2-like isoform X1 [Cucumis melo var. makuwa]9.2e-4092.86Show/hide
Query:  MKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP
        MKEMEYDE ++MRGANRRLMQYIDCGG+C+RRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGN+TKCP
Subjt:  MKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP

KGN64291.1 hypothetical protein Csa_013222 [Cucumis sativus]2.1e-60100Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
        MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT

Query:  CYTSMTTHGNRTKCP
        CYTSMTTHGNRTKCP
Subjt:  CYTSMTTHGNRTKCP

XP_008438094.1 PREDICTED: snakin-2-like isoform X1 [Cucumis melo]1.4e-5184.13Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLS--------QVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPP
        MAVRKFLLLLLLGVFVFLCLS        Q+SS+GY  +E GMKEMEYDE ++MRGANRRLMQYIDCGG+C+RRCGAHSRPNRCIRACGTCCRRCRCVPP
Subjt:  MAVRKFLLLLLLGVFVFLCLS--------QVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPP

Query:  GTSGNREMCGTCYTSMTTHGNRTKCP
        GTSGNREMCGTCYTSMTTHGN+TKCP
Subjt:  GTSGNREMCGTCYTSMTTHGNRTKCP

XP_008438104.1 PREDICTED: snakin-2-like isoform X2 [Cucumis melo]8.6e-5489.83Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
        MAVRKFLLLLLLGVFVFLCLSQ+SS+GY  +E GMKEMEYDE ++MRGANRRLMQYIDCGG+C+RRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM

Query:  CGTCYTSMTTHGNRTKCP
        CGTCYTSMTTHGN+TKCP
Subjt:  CGTCYTSMTTHGNRTKCP

XP_038895055.1 snakin-2-like [Benincasa hispida]8.3e-4983.48Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
        MAVR FLLLLLLG+FV L LSQVSS+GY EEGM EMEYDEK+MRG NRRLMQ I+CG +C+RRCGAHSRPNRCIRACGTCC RC+CVP GTSGNREMCGT
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT

Query:  CYTSMTTHGNRTKCP
        CYT+MTTHGN+TKCP
Subjt:  CYTSMTTHGNRTKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LW79 Uncharacterized protein1.0e-60100Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
        MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT

Query:  CYTSMTTHGNRTKCP
        CYTSMTTHGNRTKCP
Subjt:  CYTSMTTHGNRTKCP

A0A1S3AVJ9 snakin-2-like isoform X24.2e-5489.83Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
        MAVRKFLLLLLLGVFVFLCLSQ+SS+GY  +E GMKEMEYDE ++MRGANRRLMQYIDCGG+C+RRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM

Query:  CGTCYTSMTTHGNRTKCP
        CGTCYTSMTTHGN+TKCP
Subjt:  CGTCYTSMTTHGNRTKCP

A0A1S3AW57 snakin-2-like isoform X16.6e-5284.13Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLS--------QVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPP
        MAVRKFLLLLLLGVFVFLCLS        Q+SS+GY  +E GMKEMEYDE ++MRGANRRLMQYIDCGG+C+RRCGAHSRPNRCIRACGTCCRRCRCVPP
Subjt:  MAVRKFLLLLLLGVFVFLCLS--------QVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPP

Query:  GTSGNREMCGTCYTSMTTHGNRTKCP
        GTSGNREMCGTCYTSMTTHGN+TKCP
Subjt:  GTSGNREMCGTCYTSMTTHGNRTKCP

A0A5A7UP17 Snakin-2-like isoform X14.5e-4092.86Show/hide
Query:  MKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP
        MKEMEYDE ++MRGANRRLMQYIDCGG+C+RRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGN+TKCP
Subjt:  MKEMEYDE-KMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP

A0A6J1CAF9 snakin-2-like1.8e-3669.57Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
        MAV +F  LLLLGV VFLCLS+V   G  EEG +        +RG NRRLM++IDCGG C+RRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG 
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT

Query:  CYTSMTTHGNRTKCP
        CYT MTTH N+TKCP
Subjt:  CYTSMTTHGNRTKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 111.8e-1764.52Show/hide
Query:  IDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP
        IDC  +C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY S+TTHG R KCP
Subjt:  IDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP

P46687 Gibberellin-regulated protein 33.0e-1743.48Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
        MA+ +  L+LLL   +  CL+    + +  E       D ++  G  +     IDCGG+C+ RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT

Query:  CYTSMTTHGNRTKCP
        CY S+TT G R KCP
Subjt:  CYTSMTTHGNRTKCP

P46688 Gibberellin-regulated protein 21.0e-1745.22Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
        MAV +  L+LLL   + +CL+    + +  +G K  E   K            IDCGG+C+ RC   SR   C+RAC +CC RC CVPPGTSGN  +C  
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT

Query:  CYTSMTTHGNRTKCP
        CY S+TTHG R KCP
Subjt:  CYTSMTTHGNRTKCP

Q93X17 Snakin-29.3e-1945.69Show/hide
Query:  MAVRKFLLL-LLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCG
        MA+ K L   LLL + +   +  + ++      + E  Y  K            IDCGG C  RC   SRP  C RACGTCC RC CVPPGTSGN E C 
Subjt:  MAVRKFLLL-LLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCG

Query:  TCYTSMTTHGNRTKCP
         CY S+TTHGN+ KCP
Subjt:  TCYTSMTTHGNRTKCP

Q9LFR3 Gibberellin-regulated protein 143.5e-1862.9Show/hide
Query:  IDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP
        IDC   C  RCG HSR N C+RAC TCC RC+CVPPGT GN+E CG+CY +M T G ++KCP
Subjt:  IDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.2 GAST1 protein homolog 11.4e-1745.22Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
        MA+ K L+  LL   + L L Q   N  ++ G     Y +K            IDCG  C  RC    RP  C RACGTCC RC CVPPGT GN + C  
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT

Query:  CYTSMTTHGNRTKCP
        CY S+TTHG R KCP
Subjt:  CYTSMTTHGNRTKCP

AT2G18420.1 Gibberellin-regulated family protein1.2e-1864.52Show/hide
Query:  IDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP
        IDC  +C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY S+TTHG R KCP
Subjt:  IDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP

AT4G09600.1 GAST1 protein homolog 32.1e-1843.48Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
        MA+ +  L+LLL   +  CL+    + +  E       D ++  G  +     IDCGG+C+ RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT

Query:  CYTSMTTHGNRTKCP
        CY S+TT G R KCP
Subjt:  CYTSMTTHGNRTKCP

AT4G09610.1 GAST1 protein homolog 27.3e-1945.22Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT
        MAV +  L+LLL   + +CL+    + +  +G K  E   K            IDCGG+C+ RC   SR   C+RAC +CC RC CVPPGTSGN  +C  
Subjt:  MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGT

Query:  CYTSMTTHGNRTKCP
        CY S+TTHG R KCP
Subjt:  CYTSMTTHGNRTKCP

AT5G14920.1 Gibberellin-regulated family protein2.5e-1962.9Show/hide
Query:  IDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP
        IDC   C  RCG HSR N C+RAC TCC RC+CVPPGT GN+E CG+CY +M T G ++KCP
Subjt:  IDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCCGTAAGTTCCTCCTCCTTCTCCTTCTTGGGGTCTTCGTTTTCCTCTGCCTTTCACAGGTATCTTCCAATGGCTACGAAGAAGAAGGGATGAAGGAGATGGA
ATATGATGAAAAAATGATGAGAGGGGCAAACAGAAGGCTAATGCAATACATAGATTGTGGAGGGCAATGCAGGCGTCGTTGCGGGGCGCACTCGAGGCCAAACCGATGCA
TAAGAGCGTGCGGGACATGCTGCCGGCGCTGCAGATGTGTGCCGCCGGGTACGTCAGGTAATCGCGAGATGTGTGGCACTTGCTACACGAGCATGACCACTCATGGGAAC
AGAACCAAGTGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
GGAATTTCACGCTTAGTCGTCTCTTTTCTCTTTATATGAATGATATTAGAGTATTAGTTGCAGAATTTATGAAAGGAAGCCATGGCAGTCCGTAAGTTCCTCCTCCTTCT
CCTTCTTGGGGTCTTCGTTTTCCTCTGCCTTTCACAGGTATCTTCCAATGGCTACGAAGAAGAAGGGATGAAGGAGATGGAATATGATGAAAAAATGATGAGAGGGGCAA
ACAGAAGGCTAATGCAATACATAGATTGTGGAGGGCAATGCAGGCGTCGTTGCGGGGCGCACTCGAGGCCAAACCGATGCATAAGAGCGTGCGGGACATGCTGCCGGCGC
TGCAGATGTGTGCCGCCGGGTACGTCAGGTAATCGCGAGATGTGTGGCACTTGCTACACGAGCATGACCACTCATGGGAACAGAACCAAGTGCCCTTAATTAGCTATACC
CAAATGCATCATCAACTAAACTACTACGTTTTTCGATCTTTTGAGTTAATTTTTCGTTTCCTTCTTCTTTGATGTATGTTTCGAATTGGTTGCAAAAATTTTCTTTATTG
TTTTGTATTTCCATGTTTATGCTTCCATTTACGTGCTTAGTTTTTTAAATTACATCTTGATCAGTACATCATATATTTCTGATTAATTAGGTGAAATTACTAATTGGGTC
TTTAGTTTGAGAATTTTCTATGAAGGTGGAGGGATTTAGA
Protein sequenceShow/hide protein sequence
MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGN
RTKCP