; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G08320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G08320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription factor PAR1-like
Genome locationChr1:5247181..5248467
RNA-Seq ExpressionCSPI01G08320
SyntenyCSPI01G08320
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055213.1 transcription factor PAR1-like [Cucumis melo var. makuwa]4.8e-3087.65Show/hide
Query:  MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQG
        MALADLMANSS  CHH+V  SS KRKRREAREVRRKVQKLRWV+PGGRGL+REHLFA+TAYYILHL+LKVCALESVLKLQG
Subjt:  MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQG

KAE8124179.1 hypothetical protein FH972_019086 [Carpinus fangiana]1.1e-0751.28Show/hide
Query:  ALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL
        A  DL   S      +V      R +R  R V+ KVQKL+ ++PGG GLQ ++LFA+TA YILHLRL+V ALESVL+L
Subjt:  ALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL

KAG6573044.1 Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1463.29Show/hide
Query:  MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL
        MA  DL+ NS+SS + +V  S LKRKRREARE+RRKVQKLRWV+ GGR L+REHLFAKTA YIL+L   +     VL L
Subjt:  MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL

KAG6584233.1 hypothetical protein SDJN03_20165, partial [Cucurbita argyrosperma subsp. sororia]9.7e-2381.94Show/hide
Query:  SSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQGEA
        SSCH +V A  LKRKRREAR+VRRKVQKLRWV+PGGRGLQ+EHLFAKTA+YILHLRLKVCAL+++LKLQ EA
Subjt:  SSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQGEA

KAG7019830.1 hypothetical protein SDJN02_18794, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-2381.94Show/hide
Query:  SSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQGEA
        SSCH +V A  LKRKRREAR+VRRKVQKLRWV+PGGRGLQ+EHLFAKTA+YILHLRLKVCAL+++LKLQ EA
Subjt:  SSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQGEA

TrEMBL top hitse value%identityAlignment
A0A0A0LQU9 UBC core domain-containing protein1.2e-1060Show/hide
Query:  MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQ
        MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLR  +          LF+ + +  L       A+ S+L L+
Subjt:  MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQ

A0A438EHL0 BHLH domain-containing protein3.6e-0757.63Show/hide
Query:  SSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL
        S  K +RR  R VRRKV+KL+ +IPGGRGLQ + LF +TA YILHLRL+V  L+++ K+
Subjt:  SSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL

A0A438JND2 BHLH domain-containing protein3.6e-0757.63Show/hide
Query:  SSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL
        S  K +RR  R VRRKV+KL+ +IPGGRGLQ + LF +TA YILHLRL+V  L+++ K+
Subjt:  SSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL

A0A5A7UGX9 Transcription factor PAR1-like2.3e-3087.65Show/hide
Query:  MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQG
        MALADLMANSS  CHH+V  SS KRKRREAREVRRKVQKLRWV+PGGRGL+REHLFA+TAYYILHL+LKVCALESVLKLQG
Subjt:  MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQG

A0A5N6RR97 Uncharacterized protein5.6e-0851.28Show/hide
Query:  ALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL
        A  DL   S      +V      R +R  R V+ KVQKL+ ++PGG GLQ ++LFA+TA YILHLRL+V ALESVL+L
Subjt:  ALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAGCAGATTTGATGGCTAATTCTAGTTCCTCTTGCCATCACAGTGTGACTGCTTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAAGTTCGCCGTAAAGT
TCAGAAGCTCCGGTGGGTGATCCCTGGTGGTCGAGGGTTGCAGCGGGAACATCTCTTCGCTAAAACGGCTTATTATATATTGCATTTGAGATTGAAAGTTTGTGCTCTTG
AAAGCGTTCTCAAATTGCAGGGAGAGGCCTAA
mRNA sequenceShow/hide mRNA sequence
AGTTATTTGAAGTTCGTTCAACCATTATCGATAAATTCAGAAGCAATCTTCTTGCTGAAGTAATGTAAGTCTCTTCCTGCTTCCTTCATGATGATAACAAGACCAATACA
TATAGAAAGATCCTTAAATTTCTTTATTCTGAAGTTCGTTGTTCTTGTTTGTTTGTCCTTTGTTTTCTTTGTTTTCTTTTACGTTTCTATTGGACGCTTGTATCTTTGAA
CAATTTTCTTTTCATGTGTCAGTTAAAGCTGGATCTTGTTCTTAGAACTCAGGGACATAGTGATATCCAGTTTGTAAAAGTTCTTTTTTGTTATGTTTTTTAATTGATTC
ACTCATTTATTATTTTACATTCTTTCATGTGTTAACCAAATGTTTATACAGAACAGAATTCCACTTCCCTTCTCTTCAAGGAATTGGATAAGCCACAGCATGTGGGTGAC
GTTAGTAGTCATTGGAGAGCAAATAATCAGCACGTGAGCTGAAGGACAGGTGTCGGAATGCTAGGGAATTTAGTGTCAGTTGTCTGTCAATTTCTGGCAAACAAAAACTA
GTGGACATGATTTTCCATCCAAAATCTGCCCGCCACGTGTACAGAACCCTCCTTCCATACCCATACAATGTCTCCAACTGTTTGCCCACATGGAATCACAGTTCCCCACC
TGAAACTCAATCCTTCATTTCTCCATAGAAAAACTCAAAAAACCCCACCACCCAATTGAAGTTTCTCTTCTTATATATATACAAAACTCAAAGCCATTCGCACAAGTCAT
CTCTTTCCTACTCCCTTCATTAATTACCCTTTTTGTATTGGGTTTATACTTTTCTCTCTATGGCTTTAGCAGATTTGATGGCTAATTCTAGTTCCTCTTGCCATCACAGT
GTGACTGCTTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAAGTTCGCCGTAAAGTTCAGAAGCTCCGGTGGGTGATCCCTGGTGGTCGAGGGTTGCAGCGGGAACA
TCTCTTCGCTAAAACGGCTTATTATATATTGCATTTGAGATTGAAAGTTTGTGCTCTTGAAAGCGTTCTCAAATTGCAGGGAGAGGCCTAACTTATAGTCATATGATATT
AAGGCTCTTCTTTGTCATATAAAATTTCTTTGTTATTCTTTAATTTTGTTTCCTGTGTTTCTGTTTGACATTGTGGGGGTGTTTATTGTATATTTGTATTGGTAAATATG
TATACAAGTTGAGCATCTTTAAGCTTATAGTTGGGTTCGATAATCTCCTATATAATTTTCATTTGTTCTTTCGGTTT
Protein sequenceShow/hide protein sequence
MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRWVIPGGRGLQREHLFAKTAYYILHLRLKVCALESVLKLQGEA