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CSPI01G08350 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G08350
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNHL domain protein
Genome locationChr1:5260295..5261280
RNA-Seq ExpressionCSPI01G08350
SyntenyCSPI01G08350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055216.1 uncharacterized protein E6C27_scaffold80G00570 [Cucumis melo var. makuwa]6.7e-8491.67Show/hide
Query:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        MGDRDGAFKELESIDGADALL SKRYSCFCFPCFGP+RSGSDELSWWERVKTKAKSTKFD ED HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
Subjt:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
        PATVKLGKFQYDPISYALNFDEGH NGDVDF+G+ EY  GGGFQNFSDRFAA+PPAP+KSSSS A+NG
Subjt:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG

XP_008438207.1 PREDICTED: uncharacterized protein LOC103483378 [Cucumis melo]5.7e-8391.07Show/hide
Query:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        MGDRDGAFKELESIDGADALL SKRYSCFCFPCFGP+RSGSDELSWWERVKTKAKSTKFD ED HWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNR
Subjt:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
        PATVKLGKFQYDPISYALNFDEGH NGDVDF+G+ EY  GGGFQNFSDRFAA+PPAP+KSSSS A+NG
Subjt:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG

XP_011660353.1 uncharacterized protein LOC105436380 [Cucumis sativus]3.2e-94100Show/hide
Query:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
Subjt:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  PATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
        PATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
Subjt:  PATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG

XP_023519821.1 uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo]3.1e-7382.74Show/hide
Query:  MGDRDGAFKELES---IDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFN
        MGDRDG FKE+ES   IDGADALL S+RYSCFCFPCFG SRS SDELSWWER K KAKSTKFD ED HWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFN
Subjt:  MGDRDGAFKELES---IDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFN

Query:  RNRPATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVN
        RNRPA VKLGKFQYDPISYALNFDEGHNGDVDF+GDEY+  GGFQNFSDRF+A+ PA  KSS +A  +
Subjt:  RNRPATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVN

XP_038894780.1 uncharacterized protein LOC120083201 [Benincasa hispida]1.5e-8089.35Show/hide
Query:  MGDRDGAFKELES---IDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFN
        MGDRDGAFKELES   IDGADALL SKRYSCFCFPCFGP RS SDE+SWWERVKTKAKSTKFD ED HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFN
Subjt:  MGDRDGAFKELES---IDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFN

Query:  RNRPATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
        RNRPATVKLGKFQYDPISYALNFD+GHNGDVDFDGDEY +GGGFQNFSDRFAA+ P PVKSS + AVNG
Subjt:  RNRPATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG

TrEMBL top hitse value%identityAlignment
A0A0A0LU30 Uncharacterized protein1.6e-94100Show/hide
Query:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
Subjt:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  PATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
        PATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
Subjt:  PATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG

A0A1S3AWF8 uncharacterized protein LOC1034833782.8e-8391.07Show/hide
Query:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        MGDRDGAFKELESIDGADALL SKRYSCFCFPCFGP+RSGSDELSWWERVKTKAKSTKFD ED HWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNR
Subjt:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
        PATVKLGKFQYDPISYALNFDEGH NGDVDF+G+ EY  GGGFQNFSDRFAA+PPAP+KSSSS A+NG
Subjt:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG

A0A5A7ULQ3 Uncharacterized protein3.2e-8491.67Show/hide
Query:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        MGDRDGAFKELESIDGADALL SKRYSCFCFPCFGP+RSGSDELSWWERVKTKAKSTKFD ED HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
Subjt:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
        PATVKLGKFQYDPISYALNFDEGH NGDVDF+G+ EY  GGGFQNFSDRFAA+PPAP+KSSSS A+NG
Subjt:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG

A0A5D3BLD0 Uncharacterized protein2.8e-8391.07Show/hide
Query:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        MGDRDGAFKELESIDGADALL SKRYSCFCFPCFGP+RSGSDELSWWERVKTKAKSTKFD ED HWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNR
Subjt:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG
        PATVKLGKFQYDPISYALNFDEGH NGDVDF+G+ EY  GGGFQNFSDRFAA+PPAP+KSSSS A+NG
Subjt:  PATVKLGKFQYDPISYALNFDEGH-NGDVDFDGD-EYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG

A0A6J1KJ01 uncharacterized protein LOC1114950352.6e-7382.14Show/hide
Query:  MGDRDGAFKELES---IDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFN
        MGDRDG FKE+ES   IDGADALL S+RYSCFCFPCFG SRS SDELSWWER K KAKSTKFD ED HWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFN
Subjt:  MGDRDGAFKELES---IDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFN

Query:  RNRPATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVN
        RNRPA VKLGKFQYDPISYALNFDEGHNGDV+F+GDEY+  GGFQNFSDRF+A+ PA  KSS +A  +
Subjt:  RNRPATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)3.9e-2135.87Show/hide
Query:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELS-WWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRN
        M  +     E+++ D     L +KR  CF  PC   S+  +   S WW+R+ T  K       D  WW   IR  +++REWSE+VAGPRWKT+IRRF R+
Subjt:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELS-WWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRN

Query:  R----------------------PATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSS
                                 +   GKF+YD +SY+LNFD+G N    FD DE+     ++++S RFAA P  PV +  S
Subjt:  R----------------------PATVKLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSS

AT3G48020.1 unknown protein3.3e-2042.74Show/hide
Query:  SWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATV---KLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGF
        SWW+R+       + + ++  WW   +R+  K+REWSEIVAGPRWKTFIRRFNR+           KF+YDP+SY L+F+     D D D D+    GG 
Subjt:  SWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATV---KLGKFQYDPISYALNFDEGHNGDVDFDGDEYNTGGGF

Query:  QNFSDRFAAIPPAPVKSSSSAAVN
        ++FS R+A++P A  KS +  +V+
Subjt:  QNFSDRFAAIPPAPVKSSSSAAVN

AT5G14890.1 NHL domain-containing protein1.2e-2239.43Show/hide
Query:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSR-SGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR-
        MG       E+++ D     + +KR  CF  PC G S+ SG +   WW+R++T  K       D  WW  G     K+REWSEIVAGP+WKTFIRRF R 
Subjt:  MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSR-SGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR-

Query:  -----------NRPATVKLGKFQYDPISYALNFDEG-HNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSS
                   NRP  V    F+YD  SY+LNFD+G   G  +   DE+     ++++S RFAA P  PV +  S
Subjt:  -----------NRPATVKLGKFQYDPISYALNFDEG-HNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSS

AT5G25240.1 unknown protein2.2e-0847.37Show/hide
Query:  GIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFDEGHNG
        G   LK L+E SE +AGP+WK FIR F+  R    +   F YD  +Y+LNFD+G +G
Subjt:  GIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFDEGHNG

AT5G62865.1 unknown protein1.1e-2350Show/hide
Query:  CFCFPCFGPSRSGSD-ELSWWERVKTKAKSTKFDSEDH----HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVK----LGKFQYDPISYAL
        C CFP F  SRS +    S W R++T   S    S DH     WW   IR+  K+REWSEIVAGPRWKTFIRRFNR+ P   +      KFQYDP+SY+L
Subjt:  CFCFPCFGPSRSGSD-ELSWWERVKTKAKSTKFDSEDH----HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVK----LGKFQYDPISYAL

Query:  NFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIP
        NFD+      D + DEY   GG ++FS RFA++P
Subjt:  NFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACCGTGACGGAGCTTTCAAGGAATTAGAATCAATCGATGGCGCCGATGCTCTTTTAACCTCTAAACGCTACAGTTGTTTTTGTTTCCCTTGCTTTGGACCAAG
TCGGTCGGGTTCCGATGAGCTTTCATGGTGGGAACGGGTGAAGACGAAAGCAAAATCCACCAAGTTTGATAGCGAAGATCATCACTGGTGGACAGGCGGAATCAGATCCC
TCAAGAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAGACGTTTATTCGTCGGTTCAATAGGAACCGTCCGGCTACTGTTAAGCTTGGAAAATTCCAA
TATGACCCTATCAGTTACGCTTTGAATTTCGACGAGGGGCATAATGGGGATGTGGATTTTGATGGGGATGAATACAATACTGGTGGTGGGTTTCAGAACTTCTCAGACCG
GTTTGCTGCCATCCCTCCGGCGCCTGTGAAATCGTCTTCTTCTGCTGCGGTGAATGGTTAG
mRNA sequenceShow/hide mRNA sequence
CCGTTTTCTCCTTTTCTTTTAAAACGTCTCTTTAGCTTTCGGATAATTCAACCACCGGCTACCGGCACTCTCCGGTCACCCACCGTTCGCAATATATACAACACTCTTAT
TCTTTTCTCTAAACCCTAATTCCTCTTTCTCTCTCTTTCTCTTTCTCTTTCTTTGGCCATGGGAGACCGTGACGGAGCTTTCAAGGAATTAGAATCAATCGATGGCGCCG
ATGCTCTTTTAACCTCTAAACGCTACAGTTGTTTTTGTTTCCCTTGCTTTGGACCAAGTCGGTCGGGTTCCGATGAGCTTTCATGGTGGGAACGGGTGAAGACGAAAGCA
AAATCCACCAAGTTTGATAGCGAAGATCATCACTGGTGGACAGGCGGAATCAGATCCCTCAAGAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAGAC
GTTTATTCGTCGGTTCAATAGGAACCGTCCGGCTACTGTTAAGCTTGGAAAATTCCAATATGACCCTATCAGTTACGCTTTGAATTTCGACGAGGGGCATAATGGGGATG
TGGATTTTGATGGGGATGAATACAATACTGGTGGTGGGTTTCAGAACTTCTCAGACCGGTTTGCTGCCATCCCTCCGGCGCCTGTGAAATCGTCTTCTTCTGCTGCGGTG
AATGGTTAGGATACGGCGGCGAAGGCGATGGTGATGGGTCTTGTCTTCTCCGGTGAAGTTGAACGGGCGGTATTTTTCAACTGATGAGCTGGAAATTGACCGTTTTGGAT
GAAGTAGTAGGGAGGCGCCAATGGCGTCGGTACGCGTGTTAAAGAAGATAGTTTACTATTTTTTTAATGGGGTGACGTGTAGCTAAATGATTGGGTGGGTGTTTATATTC
TTATAGTTGATATAATTTTGTTTTATTCTTTTTCCAATTAAAAATTGTATAATTCCAAATTTCACAGAGTTTTATTTATATAAATTCTTATTAATCGATAGAGTGT
Protein sequenceShow/hide protein sequence
MGDRDGAFKELESIDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKSTKFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQ
YDPISYALNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG