; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G08380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G08380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionspermidine synthase 1-like
Genome locationChr1:5265058..5266795
RNA-Seq ExpressionCSPI01G08380
SyntenyCSPI01G08380
Gene Ontology termsGO:0006596 - polyamine biosynthetic process (biological process)
GO:0004766 - spermidine synthase activity (molecular function)
InterPro domainsIPR001045 - Spermidine/spermine synthases
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR030373 - Polyamine biosynthesis domain, conserved site
IPR030374 - Polyamine biosynthesis domain
IPR035246 - Spermidine synthase, tetramerisation domain
IPR037163 - Spermidine synthase, tetramerisation domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055218.1 spermidine synthase 1-like [Cucumis melo var. makuwa]7.1e-13287.55Show/hide
Query:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKV
        M FQNGVSSSPIKAMLH PTIETN NEPIEIISFSPIQNGTQN    GDSFSP FPGCYVDIAPFYP+ G V+K+EKVIFKGKSQYQDLFVFQ      V
Subjt:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKV

Query:  VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKS
        VILDGSLQLTEKDEFAYQEMLTHLPLCSI NPKKVLLIGGGDGGILRE SRHAC+EQIDICDLDKMV+DVYKKHFP+IAIGYKDPRVNSYIGDGVAFIKS
Subjt:  VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKS

Query:  VPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVN
        VPPATYDAIIIDAFQGMG YA ELSNED+LKSIAKALKPGGV+S PADSIWLNNFAMEDTITLC + FK  VN
Subjt:  VPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVN

TYJ99147.1 spermidine synthase 1-like [Cucumis melo var. makuwa]6.0e-13990.11Show/hide
Query:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKV
        M FQNGVSSSPIKAMLH PTIETN NEPIEIISFSPIQNGTQN    GDSFSP FPGCYVDIAPFYP+ G V+K+EKVIFKGKSQYQDLFVFQTSTHGKV
Subjt:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKV

Query:  VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKS
        VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILRE SRHAC+EQIDICDLDKMV+DVYKKHFP+IAIGYKDPRVNSYIGDGVAFIKS
Subjt:  VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKS

Query:  VPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVN
        VPPATYDAIIIDAFQGMG YA ELSNED+LKSIAKALKPGGV+S PADSIWLNNFAMEDTITLC + FK  VN
Subjt:  VPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVN

XP_008446082.2 PREDICTED: spermidine synthase 1-like [Cucumis melo]6.9e-14392.19Show/hide
Query:  MLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDE
        MLH PTIETN NEPIEIISFSPIQNGTQN    GDSFSP FPGCYVDIAPFYP+ G V+K+EKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDE
Subjt:  MLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDE

Query:  FAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAF
        FAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILRE SRHAC+EQIDICDLDKMV+DVYKKHFP+IAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAF
Subjt:  FAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAF

Query:  QGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYA
        QGMG YA ELSNED+LKSIAKALKPGGV+S PADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYA
Subjt:  QGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYA

XP_022137674.1 spermidine synthase 1-like [Momordica charantia]4.2e-11673.21Show/hide
Query:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGT--QNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVI
        M FQ G+SSS +++ LH          P+ ++S +  QNG   QN  S SP FPG Y D+AP +P+   V+K+EK+IF+ KSQYQDLFVFQT+THGKVVI
Subjt:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGT--QNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVI

Query:  LDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVP
        LDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILRE SRH+ +E IDICDLDKMV+DVYKK FP+IA+GY+DPRVN  IGDG AFIKS+P
Subjt:  LDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVP

Query:  PATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
        P TYDAII+DAFQGMG YA ELS++D L+SIAKALKPGGV+STPADS+WL NFAMEDTI LCR IFKGSVNYAWTSVPSY
Subjt:  PATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

XP_038893662.1 spermidine synthase 2-like [Benincasa hispida]1.1e-13584.62Show/hide
Query:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQNG--------DSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTST
        MTFQNGVSSS  KA LH PTI T+HNE ++IISFSPIQNGT NG         SFSP FPGCYVDIAP YP+   V+KLEKVIFKGKSQYQDLFVFQ+ T
Subjt:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQNG--------DSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTST

Query:  HGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVA
        HGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILRE SRHAC+E IDICDLDKMV+DVYK++FP+IAIGYKDPRVN  IGDGVA
Subjt:  HGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVA

Query:  FIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
        FIKSVPPATYDAIIIDAFQGMG YA ELSNEDLLKS+A ALKPGGV+STPADSIW NNFAMEDTITLCR+IFKGSVNYAWTSVPSY
Subjt:  FIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

TrEMBL top hitse value%identityAlignment
A0A0A0LQV4 PABS domain-containing protein1.5e-12280Show/hide
Query:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILD
        MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILD
Subjt:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILD

Query:  GSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPA
        GS  L E+ E  +++ L  L L                             +   +      ++ VYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPA
Subjt:  GSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPA

Query:  TYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYARQTHSK
        TYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYARQTHSK
Subjt:  TYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYARQTHSK

A0A1S3BF22 spermidine synthase 1-like3.3e-14392.19Show/hide
Query:  MLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDE
        MLH PTIETN NEPIEIISFSPIQNGTQN    GDSFSP FPGCYVDIAPFYP+ G V+K+EKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDE
Subjt:  MLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDE

Query:  FAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAF
        FAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILRE SRHAC+EQIDICDLDKMV+DVYKKHFP+IAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAF
Subjt:  FAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAF

Query:  QGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYA
        QGMG YA ELSNED+LKSIAKALKPGGV+S PADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYA
Subjt:  QGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYA

A0A5A7UJN5 Spermidine synthase 1-like3.5e-13287.55Show/hide
Query:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKV
        M FQNGVSSSPIKAMLH PTIETN NEPIEIISFSPIQNGTQN    GDSFSP FPGCYVDIAPFYP+ G V+K+EKVIFKGKSQYQDLFVFQ      V
Subjt:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKV

Query:  VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKS
        VILDGSLQLTEKDEFAYQEMLTHLPLCSI NPKKVLLIGGGDGGILRE SRHAC+EQIDICDLDKMV+DVYKKHFP+IAIGYKDPRVNSYIGDGVAFIKS
Subjt:  VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKS

Query:  VPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVN
        VPPATYDAIIIDAFQGMG YA ELSNED+LKSIAKALKPGGV+S PADSIWLNNFAMEDTITLC + FK  VN
Subjt:  VPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVN

A0A5D3BJ52 Spermidine synthase 1-like2.9e-13990.11Show/hide
Query:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKV
        M FQNGVSSSPIKAMLH PTIETN NEPIEIISFSPIQNGTQN    GDSFSP FPGCYVDIAPFYP+ G V+K+EKVIFKGKSQYQDLFVFQTSTHGKV
Subjt:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKV

Query:  VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKS
        VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILRE SRHAC+EQIDICDLDKMV+DVYKKHFP+IAIGYKDPRVNSYIGDGVAFIKS
Subjt:  VILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKS

Query:  VPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVN
        VPPATYDAIIIDAFQGMG YA ELSNED+LKSIAKALKPGGV+S PADSIWLNNFAMEDTITLC + FK  VN
Subjt:  VPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVN

A0A6J1C7X6 spermidine synthase 1-like2.0e-11673.21Show/hide
Query:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGT--QNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVI
        M FQ G+SSS +++ LH          P+ ++S +  QNG   QN  S SP FPG Y D+AP +P+   V+K+EK+IF+ KSQYQDLFVFQT+THGKVVI
Subjt:  MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGT--QNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVI

Query:  LDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVP
        LDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILRE SRH+ +E IDICDLDKMV+DVYKK FP+IA+GY+DPRVN  IGDG AFIKS+P
Subjt:  LDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVP

Query:  PATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
        P TYDAII+DAFQGMG YA ELS++D L+SIAKALKPGGV+STPADS+WL NFAMEDTI LCR IFKGSVNYAWTSVPSY
Subjt:  PATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

SwissProt top hitse value%identityAlignment
O48658 Spermidine synthase 11.8e-8559.43Show/hide
Query:  NGTQNGDSFSP----AFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLI
        NG  N +  SP      PG + +I+P +P      K+EK++F+GKS YQ++ VFQ+ST+GKV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+I
Subjt:  NGTQNGDSFSP----AFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLI

Query:  GGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALK
        GGGDGG+LRE SRH+ +EQIDIC++DKMVV+V K+ FP++A+GY+DPRVN +IGDGVAF+K+VP  TYDA+I+D+   +G  A EL  +   +SIA+AL+
Subjt:  GGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALK

Query:  PGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
        PGGV+ST A+SIWL+   +E+ +  CR IFKGSVNYAWT+VP+Y
Subjt:  PGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

O48659 Spermidine synthase 22.6e-8458.51Show/hide
Query:  QNGTQNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGG
        + G       S   PG + +I+P +P      K+EK++F+GKS YQ++ VFQ+ST+GKV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+IGGG
Subjt:  QNGTQNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGG

Query:  DGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGG
        DGG+LRE SRH+ +EQIDIC++DKMV+DV K+ FPN+AIGY+DPRV  ++GDGVAF+K+VP  TYDA+I+D+   +G  A EL  +   +S+A+AL PGG
Subjt:  DGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGG

Query:  VLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
        V+ T A+SIWL+   +ED ++ CR IFKGSVNYAWT+VP+Y
Subjt:  VLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

Q96557 Spermidine synthase 26.8e-8556.92Show/hide
Query:  IEIISFSPIQNGTQN---GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSI
        +E+ + +   NG  N       S   PG + +I+P +P      K+EK++F+GKS YQD+ VFQ++T+GKV++LDG +QLTE+DE AYQEM+THLPLCSI
Subjt:  IEIISFSPIQNGTQN---GDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSI

Query:  PNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDL
        PNPKKVL+IGGGDGG+LRE SRH+ +EQIDIC++DKMVV+V K+ FP++A+GY+DPRVN +IGDGVAF+K+VP  TYDA+I+D+   +G  A EL  +  
Subjt:  PNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDL

Query:  LKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
         ++IA+AL+PGGV+ST A+SIWL+   +E+ +  CR IFKGSVNYAWT+VP+Y
Subjt:  LKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

Q9ZS45 Spermidine synthase4.0e-8559.67Show/hide
Query:  NGTQNGDS---FSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIG
        NG +  +S    S   PG + +I+P +P      K+EK++F+GKS YQ++ VFQ+ST+GKV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+IG
Subjt:  NGTQNGDS---FSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIG

Query:  GGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKP
        GGDGG+LRE SRH+ +EQIDIC++DKMVV+V K+ FP++A+GY+DPRVN +IGDGVAF+K+VP  TYDA+I+D+   +G  A EL  +   +SIAKAL+P
Subjt:  GGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKP

Query:  GGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
        GGV+ST A+SIWL+   +E+ +  CR IFKGSVNYAWT+VP+Y
Subjt:  GGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

Q9ZUB3 Spermidine synthase 14.4e-8458.61Show/hide
Query:  TQNGDS------FSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLI
        T+NGD       FS   PG + +++P +P      K+EKV+F+GKS YQD+ VFQ++T+GKV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+I
Subjt:  TQNGDS------FSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLI

Query:  GGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALK
        GGGDGG+LRE +RHA +EQID+C++DKMVVDV K+ FP++AIGY+DPRVN  IGDGVAF+K+    +YDA+I+D+   +G  A EL  +   +S+A+AL+
Subjt:  GGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALK

Query:  PGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
        PGGV+ T A+S+WL+   +ED ++ CR IFKGSVNYAWTSVP+Y
Subjt:  PGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

Arabidopsis top hitse value%identityAlignment
AT1G23820.1 spermidine synthase 13.1e-8558.61Show/hide
Query:  TQNGDS------FSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLI
        T+NGD       FS   PG + +++P +P      K+EKV+F+GKS YQD+ VFQ++T+GKV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+I
Subjt:  TQNGDS------FSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLI

Query:  GGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALK
        GGGDGG+LRE +RHA +EQID+C++DKMVVDV K+ FP++AIGY+DPRVN  IGDGVAF+K+    +YDA+I+D+   +G  A EL  +   +S+A+AL+
Subjt:  GGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALK

Query:  PGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
        PGGV+ T A+S+WL+   +ED ++ CR IFKGSVNYAWTSVP+Y
Subjt:  PGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

AT1G23820.2 spermidine synthase 11.1e-8558.54Show/hide
Query:  TQNGDS------FSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLI
        T+NGD       FS   PG + +++P +P      K+EKV+F+GKS YQD+ VFQ++T+GKV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+I
Subjt:  TQNGDS------FSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLI

Query:  GGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALK
        GGGDGG+LRE +RHA +EQID+C++DKMVVDV K+ FP++AIGY+DPRVN  IGDGVAF+K+    +YDA+I+D+   +G  A EL  +   +S+A+AL+
Subjt:  GGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALK

Query:  PGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYAR
        PGGV+ T A+S+WL+   +ED ++ CR IFKGSVNYAWTSVP+Y R
Subjt:  PGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYAR

AT1G70310.1 spermidine synthase 22.9e-8359.31Show/hide
Query:  SPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASR
        S   PG + +I+P +P      K+EK++F+GKS YQD+ VFQ++T+GKV++LDG +QLTE+DE AYQEM+THLPLCSI NPKKVL+IGGGDGG+LRE +R
Subjt:  SPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASR

Query:  HACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIW
        H+ +EQIDIC++DKMVVDV K++FPN+A+GY+DPRVN  IGDGVAF+K+    TYDA+I+D+   +G  A EL  +   +S+ +AL+PGGV+ T A+S+W
Subjt:  HACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIW

Query:  LNNFAMEDTITLCRNIFKGSVNYAWTSVPSY
        L+   +ED ++ CR+IFKGSVNYAWTSVP+Y
Subjt:  LNNFAMEDTITLCRNIFKGSVNYAWTSVPSY

AT5G53120.1 spermidine synthase 31.8e-6954.34Show/hide
Query:  PFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDL
        P +P      K+EKV+FK KS +Q++ VF+++T+GKV++LDG +QLTEKDE AYQEM+ HLPLCSI +PK VL++GGGDGG+LRE SRH+ +E IDIC++
Subjt:  PFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDL

Query:  DKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITL
        DKMV+DV KK FP +A+G+ DPRV  +IGD   F++  P   YDAII+D+   +G  A  L  +   +++A+ALKPGGVL   A+S+WL+   +ED I++
Subjt:  DKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITL

Query:  CRNIFKGSVNYAWTSVPSY
        CR  FK SV+YAW+SVP+Y
Subjt:  CRNIFKGSVNYAWTSVPSY

AT5G53120.2 spermidine synthase 31.8e-6954.34Show/hide
Query:  PFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDL
        P +P      K+EKV+FK KS +Q++ VF+++T+GKV++LDG +QLTEKDE AYQEM+ HLPLCSI +PK VL++GGGDGG+LRE SRH+ +E IDIC++
Subjt:  PFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDL

Query:  DKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITL
        DKMV+DV KK FP +A+G+ DPRV  +IGD   F++  P   YDAII+D+   +G  A  L  +   +++A+ALKPGGVL   A+S+WL+   +ED I++
Subjt:  DKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITL

Query:  CRNIFKGSVNYAWTSVPSY
        CR  FK SV+YAW+SVP+Y
Subjt:  CRNIFKGSVNYAWTSVPSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTTCAAAATGGTGTCTCTTCTTCTCCCATTAAAGCCATGCTCCATGCCCCTACCATTGAAACCAACCATAACGAGCCTATTGAAATCATTTCTTTCTCTCCTAT
TCAAAATGGCACTCAAAATGGAGATTCTTTTTCGCCTGCCTTTCCAGGATGCTATGTCGATATTGCCCCATTCTATCCTGATCACGGACAAGTCTTTAAGCTAGAGAAGG
TCATATTCAAAGGAAAATCACAGTATCAAGATCTTTTTGTTTTTCAGACATCAACACATGGAAAGGTTGTTATTTTGGATGGGTCACTTCAACTAACAGAGAAGGATGAA
TTTGCTTATCAAGAAATGCTCACTCATCTCCCACTTTGTTCTATTCCCAATCCCAAAAAGGTCTTGCTCATTGGAGGAGGAGATGGAGGGATTCTTCGAGAAGCATCTCG
ACATGCTTGTCTTGAGCAAATCGACATTTGTGATCTCGACAAGATGGTGGTTGATGTTTACAAGAAGCACTTCCCAAACATTGCTATCGGATACAAGGATCCTCGTGTGA
ATTCATACATAGGCGACGGTGTGGCCTTCATCAAATCTGTTCCTCCAGCAACCTATGATGCTATCATAATTGATGCATTTCAAGGCATGGGGGTTTATGCAAATGAGCTT
TCAAATGAAGACTTACTTAAATCAATAGCAAAGGCGTTGAAGCCCGGTGGAGTATTGTCGACTCCGGCTGACAGCATATGGCTGAACAATTTCGCCATGGAAGACACCAT
AACTCTCTGTCGTAACATCTTCAAAGGCTCTGTAAACTATGCTTGGACCTCTGTCCCTTCATATGCAAGGCAAACCCATTCAAAACGAACCCTTTGTTTCATTTCCAAAC
TTCTTCATGTTTATGTTTCTGCAAAATCTGCACTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATTTCAAAATGGTGTCTCTTCTTCTCCCATTAAAGCCATGCTCCATGCCCCTACCATTGAAACCAACCATAACGAGCCTATTGAAATCATTTCTTTCTCTCCTAT
TCAAAATGGCACTCAAAATGGAGATTCTTTTTCGCCTGCCTTTCCAGGATGCTATGTCGATATTGCCCCATTCTATCCTGATCACGGACAAGTCTTTAAGCTAGAGAAGG
TCATATTCAAAGGAAAATCACAGTATCAAGATCTTTTTGTTTTTCAGACATCAACACATGGAAAGGTTGTTATTTTGGATGGGTCACTTCAACTAACAGAGAAGGATGAA
TTTGCTTATCAAGAAATGCTCACTCATCTCCCACTTTGTTCTATTCCCAATCCCAAAAAGGTCTTGCTCATTGGAGGAGGAGATGGAGGGATTCTTCGAGAAGCATCTCG
ACATGCTTGTCTTGAGCAAATCGACATTTGTGATCTCGACAAGATGGTGGTTGATGTTTACAAGAAGCACTTCCCAAACATTGCTATCGGATACAAGGATCCTCGTGTGA
ATTCATACATAGGCGACGGTGTGGCCTTCATCAAATCTGTTCCTCCAGCAACCTATGATGCTATCATAATTGATGCATTTCAAGGCATGGGGGTTTATGCAAATGAGCTT
TCAAATGAAGACTTACTTAAATCAATAGCAAAGGCGTTGAAGCCCGGTGGAGTATTGTCGACTCCGGCTGACAGCATATGGCTGAACAATTTCGCCATGGAAGACACCAT
AACTCTCTGTCGTAACATCTTCAAAGGCTCTGTAAACTATGCTTGGACCTCTGTCCCTTCATATGCAAGGCAAACCCATTCAAAACGAACCCTTTGTTTCATTTCCAAAC
TTCTTCATGTTTATGTTTCTGCAAAATCTGCACTTTTCTGA
Protein sequenceShow/hide protein sequence
MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQNGDSFSPAFPGCYVDIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDE
FAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREASRHACLEQIDICDLDKMVVDVYKKHFPNIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANEL
SNEDLLKSIAKALKPGGVLSTPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYARQTHSKRTLCFISKLLHVYVSAKSALF