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CSPI01G08400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G08400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationChr1:5274069..5276540
RNA-Seq ExpressionCSPI01G08400
SyntenyCSPI01G08400
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573049.1 Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp. sororia]1.8e-2897.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_004152470.1 protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus]7.2e-30100Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_022923645.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]4.7e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_022954951.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]1.8e-2897.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES TEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_038893721.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida]2.3e-2894.52Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATESKTATEEVK+DLFEDDDEFEEFEINEEWE+KEEGKE+TQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

TrEMBL top hitse value%identityAlignment
A0A0A0LU33 Uncharacterized protein3.5e-30100Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A1S3AW15 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like3.5e-30100Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A5A7UJ57 Putative 26S proteasome complex subunit sem1-13.5e-30100Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A6J1ECF8 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like2.3e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A6J1KGG4 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like2.3e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

SwissProt top hitse value%identityAlignment
P60896 26S proteasome complex subunit SEM12.2e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK

Q3ZBR6 26S proteasome complex subunit SEM12.2e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEK

Q54K21 Probable 26S proteasome complex subunit sem19.8e-0645.71Show/hide
Query:  ESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        +++   +E  +++ E DDEFEEFE N    M E      +QWEDDWD D ++DDFS QLR E+ES++  K
Subjt:  ESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V2.8e-2172.6Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)2.0e-2277.03Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)1.4e-2377.03Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)1.4e-2377.03Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)1.5e-1749.57Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EWEMKEEGKEITQQWEDDWDDDDVNDDF
        MA E K AT E VK+DLFEDDDEFEEFEINE                                         +W  KEE KE++QQWEDDWDDDDVNDDF
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EWEMKEEGKEITQQWEDDWDDDDVNDDF

Query:  SLQLRRELESNTEKK
        S QLR+ELE+ T+KK
Subjt:  SLQLRRELESNTEKK

AT5G45010.1 DSS1 homolog on chromosome V2.0e-2272.6Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGAATCCAAGACTGCGACTGAGGAAGTTAAGATTGACCTCTTTGAAGATGATGATGAGTTTGAAGAGTTTGAAATTAATGAAGAGTGGGAAATGAAAGAAGA
AGGCAAAGAAATTACACAGCAGTGGGAAGACGACTGGGATGATGACGATGTCAACGACGACTTCTCTCTGCAGCTTAGAAGAGAATTGGAGAGCAATACCGAGAAGAAAT
GA
mRNA sequenceShow/hide mRNA sequence
AAAAGAAAAGTAAATGGAAAATATTTTAAGTGAAGATTTCACGATTCGAACTCCCAACCGCAGCCTCGGCGCTTTGATCTCATAATTAGGGCTAAAAATTTCATTTGCAA
AATTCTTCAGCTGGCTCGTCTTCTTACTCATCTCCCCGACTCTTCCCTATTACCTAATTCGACCCAGACTTAAAATTTTTCATGGCGACTGAATCCAAGACTGCGACTGA
GGAAGTTAAGATTGACCTCTTTGAAGATGATGATGAGTTTGAAGAGTTTGAAATTAATGAAGAGTGGGAAATGAAAGAAGAAGGCAAAGAAATTACACAGCAGTGGGAAG
ACGACTGGGATGATGACGATGTCAACGACGACTTCTCTCTGCAGCTTAGAAGAGAATTGGAGAGCAATACCGAGAAGAAATGAGAAGACTTTTTTTTAGTGTCTTGAATG
TTTTTATCTTCTAAGATGTATGTTTAAGTTATGTCTTTTGACCCCATTGTGATTTTACGCCGTCTTATATCCTTGTAAATGGTGGTATTATGAACATACTTAGTAGCCTC
AAACATGTTTTACCTTTTCAGATCAGATGATTGGAAATTTGTGAAACGTTTTGCTCTGAAGAAAACACTGATTATTGTTGTAGCATCTTCT
Protein sequenceShow/hide protein sequence
MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK