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CSPI01G08780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G08780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription termination factor 4
Genome locationChr1:5511097..5513183
RNA-Seq ExpressionCSPI01G08780
SyntenyCSPI01G08780
Gene Ontology termsGO:0090266 - regulation of mitotic cell cycle spindle assembly checkpoint (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
InterPro domainsIPR026182 - Anaphase-promoting complex subunit 15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152491.1 uncharacterized protein LOC101206898 [Cucumis sativus]3.1e-44100Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
XP_008438807.1 PREDICTED: uncharacterized protein LOC103483797 [Cucumis melo]9.8e-4396.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
XP_018813880.1 uncharacterized protein LOC108985877 [Juglans regia]1.8e-3686.73Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDI--EAEDDDADNADESEAEEFEQET
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQP +EELLLAMEE+DFEEKCNEIRKTNSNLVVIGK T DNDKED   +A+DDDADNA+ESE EEFEQET
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDI--EAEDDDADNADESEAEEFEQET
XP_022137094.1 uncharacterized protein LOC111008654 [Momordica charantia]4.1e-4194.79Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQET
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKM+ADNDKEDIEAEDDDADN +ESEAEEFEQET
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQET
XP_038894516.1 uncharacterized protein LOC120083062 [Benincasa hispida]2.4e-4194.85Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSN VVIGKM ADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
TrEMBL top hitse value%identityAlignment
A0A0A0LWF0 Uncharacterized protein1.5e-44100Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
A0A1S3AXA5 uncharacterized protein LOC1034837974.8e-4396.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
A0A5A7UJS1 Transcription termination factor 44.8e-4396.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
A0A6J1GSM6 uncharacterized protein LOC1114567624.8e-4396.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
A0A6J1JWJ6 uncharacterized protein LOC1114903244.8e-4396.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63135.1 unknown protein3.2e-3171.72Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKE--DIEAEDDDADNADESEAEEFEQETG
        MLQFP  MTQ+P ST+ IP S+LLP QWPQPQNEE+LLAMEEA+FEEKCNEIRK +  L VIGK   +N++E  D EAEDDDADNA+ES+ EEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKE--DIEAEDDDADNADESEAEEFEQETG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCAGTTCCCGGCTTTCATGACACAGTATCCTTGGTCTACCAGGAAAATTCCGACGTCGTTTTTACTGCCGTCTCAGTGGCCTCAACCCCAGAACGAAGAGCTACT
GCTCGCCATGGAAGAAGCTGATTTTGAAGAAAAGTGCAATGAAATTAGGAAAACAAACAGCAACCTTGTGGTCATCGGAAAAATGACTGCTGACAATGATAAGGAAGACA
TAGAGGCAGAAGATGATGATGCTGACAATGCTGATGAATCTGAGGCTGAAGAATTTGAGCAGGAAACTGGCTAA
mRNA sequenceShow/hide mRNA sequence
GAGAAATAGAGAGCACAGTCAACAGTGGTGGGAAGATTGACGGTGGCCGGAATGGAACGAAATCTTATATATATAACAAAATTTCATATTCTATCGATTCTTAGTATACG
CGATGATAAGCTGAAACCAGAATAGGGACAGAAATAAACCAGTTGCCAAACACTAGAGATTTTCGAGTTTACAACAGAGCGAGCCCATTCGGAGTGTCTCCAGTTTCCAG
CTCCGGCGAGAAAAATGCTGCAGTTCCCGGCTTTCATGACACAGTATCCTTGGTCTACCAGGAAAATTCCGACGTCGTTTTTACTGCCGTCTCAGTGGCCTCAACCCCAG
AACGAAGAGCTACTGCTCGCCATGGAAGAAGCTGATTTTGAAGAAAAGTGCAATGAAATTAGGAAAACAAACAGCAACCTTGTGGTCATCGGAAAAATGACTGCTGACAA
TGATAAGGAAGACATAGAGGCAGAAGATGATGATGCTGACAATGCTGATGAATCTGAGGCTGAAGAATTTGAGCAGGAAACTGGCTAAAACTACTTGCATCTTTGTGCCC
TTTCTTGCCTTTACTCTTTAAAATCCTCAAATTGCTAGTTTTTTTTTAACGATTGTTCTTTGTAAATCTGTCACTTTGAAAAGCCAGAGTTTTTGTAATCGTTCAATTTG
CTACTGTTATACTGTTTCCAATTTTACTTTCAATATGATGTTACAATTATGACATTGAAAGTTGAATGGTGTTACTAATGCTTGATCAGAAGAATTGTACTCCGTAACTT
GTGTGGACTACTTATGCTTCATTCAACGGCCACATCTTCATGG
Protein sequenceShow/hide protein sequence
MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG