; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G09980 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G09980
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat
Genome locationChr1:6231125..6233506
RNA-Seq ExpressionCSPI01G09980
SyntenyCSPI01G09980
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055365.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo var. makuwa]7.4e-12294.69Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
        MKRIRQQLLTLQRLPLSPELLRFQIP ILSPFSSSSSFIS SPSASIAT+PNTTLTHDELTRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SLSLSV
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALK+FHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRV
        VPDCDLRNWVFR LL+EAMIPEAMEFN+  NFVGDQ+TIDHLRRV
Subjt:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRV

KAG6584178.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.0e-9474.42Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
        MK +RQ+LL L RLPL P+L+  QIPAI +PFSSSSS  S S   S A+K NTTLT DELT+I+LLLPRLC +NH STAI+LL   LLTN SL SL LS+
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+TMLI SY ++RK KEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID
        VPD DLR+WVFR LL+EAMI EA E ++ LN +GD+NT DHLRRVSELL+RIITNWI+
Subjt:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID

TYJ99292.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo var. makuwa]7.4e-12294.69Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
        MKRIRQQLLTLQRLPLSPELLRFQIP ILSPFSSSSSFIS SPSASIAT+PNTTLTHDELTRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SLSLSV
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALK+FHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRV
        VPDCDLRNWVFR LL+EAMIPEAMEFN+  NFVGDQ+TIDHLRRV
Subjt:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRV

XP_004154059.1 putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis sativus]6.2e-137100Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
        MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID
        VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID
Subjt:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID

XP_038876976.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida]1.3e-10580.77Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSP-SASIATKPNTTLTHDEL-TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSL
        MKRIRQ+LL L RLPL P+LL +QIPAI S  SSSSS    +P SASIA++PNTTLTHDEL T+INLLLPRLC +NH STAI+LL ATLLTNPSL SL L
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSP-SASIATKPNTTLTHDEL-TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSL

Query:  SVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDS
        S+LSHSLASQSDFALTMSLLTRL HH NALLYSTPI+TMLI SY KRRKSK+ALK+FHWMLRPGSPCKP+ERVY TLIAGL RKGMT DALKVLRNM++S
Subjt:  SVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDS

Query:  NLVPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID
        NLVPDCDLRNWVFR LL+EAMI EAME N+ LNFVGDQNT DHLR+VSELL+RIITNWID
Subjt:  NLVPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID

TrEMBL top hitse value%identityAlignment
A0A0A0LRQ9 Uncharacterized protein3.0e-137100Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
        MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID
        VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID
Subjt:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID

A0A5A7UP05 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X23.6e-12294.69Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
        MKRIRQQLLTLQRLPLSPELLRFQIP ILSPFSSSSSFIS SPSASIAT+PNTTLTHDELTRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SLSLSV
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALK+FHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRV
        VPDCDLRNWVFR LL+EAMIPEAMEFN+  NFVGDQ+TIDHLRRV
Subjt:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRV

A0A5D3BHR6 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X13.6e-12294.69Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
        MKRIRQQLLTLQRLPLSPELLRFQIP ILSPFSSSSSFIS SPSASIAT+PNTTLTHDELTRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SLSLSV
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALK+FHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRV
        VPDCDLRNWVFR LL+EAMIPEAMEFN+  NFVGDQ+TIDHLRRV
Subjt:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRV

A0A6J1E820 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like3.8e-9273.26Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
        MK I Q+LL L RLPL P+L+  QIPAI +PFS  SS  S S   S A+K NTTLT DELT+I+LLLPRLC +NH STAI+LL   LLTN SL SL LS+
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+TMLI SY K+RK KEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID
        VPD DLR+WVFR LL+EAMI EA E ++ LN +GD+NT DHLRRVSELL+ II NWI+
Subjt:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID

A0A6J1KEJ7 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like3.8e-9272.87Show/hide
Query:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV
        MK IRQ+LL L+RLPL P+L+  QIPAI +PFSSSSS  S S   S A+K NTTLT DELT+I+LLLPRLCL+NH STAI+LL   LLTN SL SL LS+
Subjt:  MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSV

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+TMLI SY K+RKSKEALK+FHWMLRPGSPCKP+E VYKTLIAGL RKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID
        VPD DLR+WV   LL+EAMI EA E ++ LN + D+N  DHLR+VSELL+R+I NWI+
Subjt:  VPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID

SwissProt top hitse value%identityAlignment
Q0WKZ3 Pentatricopeptide repeat-containing protein At1g645802.0e-0523.5Show/hide
Query:  NTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHH---PNALLYSTPIVTMLISSYCKRRKS
        N  ++HD L    +L+   C  + LS A++LL   +        ++L  L +     + F   +SL+  +      PN ++Y+T     +I+  CK R  
Subjt:  NTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHH---PNALLYSTPIVTMLISSYCKRRKS

Query:  KEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPD-----------------CDLRNWVFRSLLKEAMIPEAMEFNDALN
          AL++F+ M + G   + +   Y TLI+GL   G   DA ++LR+M+   + P+                  + RN +++ +++ +++P    +N  +N
Subjt:  KEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPD-----------------CDLRNWVFRSLLKEAMIPEAMEFNDALN

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099001.5e-0526.51Show/hide
Query:  NLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLR
        N+L+  LC    L  AI +L          +SLS + L H    +      +  L R+     +P+ + Y+T     ++++ CK  K ++A+++ + +  
Subjt:  NLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLR

Query:  PGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEF
         G  C P    Y T+I GL + G T  A+K+L  M   +L PD    + +   L +E  + EA++F
Subjt:  PGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEF

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial3.4e-0526.35Show/hide
Query:  ELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWM
        +L  ++ L+  LCL   +S A+ L+   +        ++   + + L    + AL + L  +++     +  S    +++I S CK     +AL LF+ M
Subjt:  ELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWM

Query:  LRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAME
           G   K +   Y +LI GL   G   D  K+LR MI  N++PD    + +    +KE  + EA E
Subjt:  LRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAME

Q9FJE6 Putative pentatricopeptide repeat-containing protein At5g599001.8e-0626.51Show/hide
Query:  NLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALT---MSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLR
        ++L+   C    L TA+S L   + T   L     + L +      D +     M+ +   K  P  + Y     T L+  YC + K  +AL+L+H M  
Subjt:  NLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALT---MSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLR

Query:  PGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEF
         G    P    + TL++GL+R G+  DA+K+   M + N+ P+    N +     +E  + +A EF
Subjt:  PGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEF

Q9FND8 Pentatricopeptide repeat-containing protein At5g404002.4e-0627.07Show/hide
Query:  HSLSLSVLSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALK
        ++ + ++L++   + S+F      L +++     P+ + Y+T     L+SSYC+R + KEA  L+  M R      P+   Y +LI GL + G   +A +
Subjt:  HSLSLSVLSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALK

Query:  VLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEA
            M+D  + PDC   N +  +  KE M+ ++
Subjt:  VLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEA

Arabidopsis top hitse value%identityAlignment
AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.1e-0626.51Show/hide
Query:  NLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLR
        N+L+  LC    L  AI +L          +SLS + L H    +      +  L R+     +P+ + Y+T     ++++ CK  K ++A+++ + +  
Subjt:  NLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLR

Query:  PGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEF
         G  C P    Y T+I GL + G T  A+K+L  M   +L PD    + +   L +E  + EA++F
Subjt:  PGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEF

AT1G64580.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-0623.5Show/hide
Query:  NTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHH---PNALLYSTPIVTMLISSYCKRRKS
        N  ++HD L    +L+   C  + LS A++LL   +        ++L  L +     + F   +SL+  +      PN ++Y+T     +I+  CK R  
Subjt:  NTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHH---PNALLYSTPIVTMLISSYCKRRKS

Query:  KEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPD-----------------CDLRNWVFRSLLKEAMIPEAMEFNDALN
          AL++F+ M + G   + +   Y TLI+GL   G   DA ++LR+M+   + P+                  + RN +++ +++ +++P    +N  +N
Subjt:  KEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPD-----------------CDLRNWVFRSLLKEAMIPEAMEFNDALN

AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein2.4e-0626.35Show/hide
Query:  ELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWM
        +L  ++ L+  LCL   +S A+ L+   +        ++   + + L    + AL + L  +++     +  S    +++I S CK     +AL LF+ M
Subjt:  ELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWM

Query:  LRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAME
           G   K +   Y +LI GL   G   D  K+LR MI  N++PD    + +    +KE  + EA E
Subjt:  LRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAME

AT5G40400.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-0727.07Show/hide
Query:  HSLSLSVLSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALK
        ++ + ++L++   + S+F      L +++     P+ + Y+T     L+SSYC+R + KEA  L+  M R      P+   Y +LI GL + G   +A +
Subjt:  HSLSLSVLSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALK

Query:  VLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEA
            M+D  + PDC   N +  +  KE M+ ++
Subjt:  VLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEA

AT5G59900.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-0726.51Show/hide
Query:  NLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALT---MSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLR
        ++L+   C    L TA+S L   + T   L     + L +      D +     M+ +   K  P  + Y     T L+  YC + K  +AL+L+H M  
Subjt:  NLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALT---MSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLR

Query:  PGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEF
         G    P    + TL++GL+R G+  DA+K+   M + N+ P+    N +     +E  + +A EF
Subjt:  PGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAATACGGCAACAGCTTCTTACCCTACAACGTCTTCCACTCTCACCAGAGCTCCTCCGCTTTCAAATTCCCGCCATTCTTTCTCCATTTTCTTCTTCTTCCTC
CTTCATTTCCGATTCTCCATCAGCTTCCATAGCCACCAAACCCAATACCACTCTGACCCACGACGAGCTCACAAGGATCAATCTCCTTCTTCCTCGTCTCTGTCTCCACA
ACCACCTTTCTACTGCTATCTCTCTTCTCCACGCCACTCTCCTCACCAATCCTTCACTTCACTCTCTTTCCCTTTCAGTTCTCTCCCATTCACTTGCTTCCCAGTCCGAT
TTTGCCCTCACAATGTCCCTCCTCACTCGTCTTAAGCACCATCCCAATGCCCTTCTCTATTCAACCCCTATCGTCACTATGCTTATTTCCTCTTATTGCAAACGCCGGAA
ATCCAAGGAGGCGTTGAAGCTTTTCCATTGGATGCTGAGACCGGGGTCGCCATGTAAGCCGGAAGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTATAGGAAGGGTA
TGACATTTGATGCTTTGAAGGTTCTCAGGAATATGATTGATTCGAATTTGGTTCCGGATTGCGATTTGAGAAATTGGGTTTTTAGGTCTTTGCTGAAAGAAGCGATGATC
CCCGAAGCCATGGAGTTTAATGATGCTTTGAATTTCGTTGGCGATCAGAATACAATTGACCATCTTCGAAGGGTGTCGGAATTGTTGAATCGTATCATCACCAATTGGAT
AGACTAG
mRNA sequenceShow/hide mRNA sequence
GGAAAAAATATATAAGAAGCAGAGTCTTTGAATGAGACTTTGCAAGGAGCAGAGTCGAGTTGAGTCTGAGAGGAAATGAAGAGAATACGGCAACAGCTTCTTACCCTACA
ACGTCTTCCACTCTCACCAGAGCTCCTCCGCTTTCAAATTCCCGCCATTCTTTCTCCATTTTCTTCTTCTTCCTCCTTCATTTCCGATTCTCCATCAGCTTCCATAGCCA
CCAAACCCAATACCACTCTGACCCACGACGAGCTCACAAGGATCAATCTCCTTCTTCCTCGTCTCTGTCTCCACAACCACCTTTCTACTGCTATCTCTCTTCTCCACGCC
ACTCTCCTCACCAATCCTTCACTTCACTCTCTTTCCCTTTCAGTTCTCTCCCATTCACTTGCTTCCCAGTCCGATTTTGCCCTCACAATGTCCCTCCTCACTCGTCTTAA
GCACCATCCCAATGCCCTTCTCTATTCAACCCCTATCGTCACTATGCTTATTTCCTCTTATTGCAAACGCCGGAAATCCAAGGAGGCGTTGAAGCTTTTCCATTGGATGC
TGAGACCGGGGTCGCCATGTAAGCCGGAAGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTATAGGAAGGGTATGACATTTGATGCTTTGAAGGTTCTCAGGAATATG
ATTGATTCGAATTTGGTTCCGGATTGCGATTTGAGAAATTGGGTTTTTAGGTCTTTGCTGAAAGAAGCGATGATCCCCGAAGCCATGGAGTTTAATGATGCTTTGAATTT
CGTTGGCGATCAGAATACAATTGACCATCTTCGAAGGGTGTCGGAATTGTTGAATCGTATCATCACCAATTGGATAGACTAGAGAAGATCTTCTGTATCAGGTTCCTTTC
CTGGAGAAGGAAGAGAAACTTGGTCGTTACCGGTGTATTCAATTTCCAGGGAGAGGAAAGGCAGTGATGCAGGACCCCATAGTCTTCACAAATCTTCAAAGTAGAAAGGC
TTGAGCATCAAGTTCACATCAAATGTTACAAACTGGGATAAACAGCTGCAGAAATTGAGGGTATAATGTAACATAATGGTGGTTAAATGTCCCTGCAACCCGAGTGGAGG
TTAACTACATAATTTTTTCTCTGTTTAGTATCATCATTTTGGACATGGGGTTTCAATAGAATCTTCGCAAAGTTCTCTCAGTTGGTGGTGGGTACTAAGCATTACCTAAT
TCAAACTCGTTAAGACACAAGTAGGTGGGCGTTCCAACTTGAAGTCTCACTCGTTCGAGTTTAGGGAAGAAAAACATCAAACTTATAATTAAGTTTTTTAAACCAGTCAA
AAGTTTGAATGTACTCGTCAGCAATTTTGAACTTGATAAAAAACACTGTCTTGTTTTATTTTTAATGTGAATATTGTATCGGTTAACTTCGAGACATTTTTATGTTCCGT
ATGAAATTTAAATTCGAATACATATTTCAATCATATTTCTAATTATTAACTTATTTCAATCTGATAAACTAAACAACTTAACATCCATTATCAAAACCATTTTTTACATT
TGAAGAGAGAAAATTATATATAGAAAGAGATGTTGAATATTACAACAA
Protein sequenceShow/hide protein sequence
MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSD
FALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMI
PEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID