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CSPI01G10380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G10380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionp55
Genome locationChr1:6548047..6548680
RNA-Seq ExpressionCSPI01G10380
SyntenyCSPI01G10380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056835.1 p55 [Cucumis melo var. makuwa]2.2e-0736.2Show/hide
Query:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGK-----------------------------------------------------------------TADL
        ME W S++VSV  LIVKLEETVKK+K VSGK                                                                 T D 
Subjt:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGK-----------------------------------------------------------------TADL

Query:  DTEARGKKRSTSLDDTTQEEPKTKRSRTNNSEEGSSSGGFRLVDLIVKVEEVVKKLKGVDRKK
         +  R + RS SLDDT++ E + KR +    +EG SSG  RL DLI +VEE+VKKLKGVD KK
Subjt:  DTEARGKKRSTSLDDTTQEEPKTKRSRTNNSEEGSSSGGFRLVDLIVKVEEVVKKLKGVDRKK
KGN64495.1 hypothetical protein Csa_013245 [Cucumis sativus]2.3e-1249.18Show/hide
Query:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGKTADL-------------------------------------------------------------DTEA
        MEGWGSKSVSVDVLIVKLEETVKKLK VSGKTADL                                                             DTEA
Subjt:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGKTADL-------------------------------------------------------------DTEA

Query:  RGKKRSTSLDDTTQEEPKTKRS
        RGKKRSTSLDDTTQEEPKTKRS
Subjt:  RGKKRSTSLDDTTQEEPKTKRS
XP_008440827.1 PREDICTED: uncharacterized protein LOC103485133 isoform X1 [Cucumis melo]2.2e-0736.2Show/hide
Query:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGK-----------------------------------------------------------------TADL
        ME W S++VSV  LIVKLEETVKK+K VSGK                                                                 T D 
Subjt:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGK-----------------------------------------------------------------TADL

Query:  DTEARGKKRSTSLDDTTQEEPKTKRSRTNNSEEGSSSGGFRLVDLIVKVEEVVKKLKGVDRKK
         +  R + RS SLDDT++ E + KR +    +EG SSG  RL DLI +VEE+VKKLKGVD KK
Subjt:  DTEARGKKRSTSLDDTTQEEPKTKRSRTNNSEEGSSSGGFRLVDLIVKVEEVVKKLKGVDRKK
TrEMBL top hitse value%identityAlignment
A0A0A0LRI0 Uncharacterized protein1.1e-1249.18Show/hide
Query:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGKTADL-------------------------------------------------------------DTEA
        MEGWGSKSVSVDVLIVKLEETVKKLK VSGKTADL                                                             DTEA
Subjt:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGKTADL-------------------------------------------------------------DTEA

Query:  RGKKRSTSLDDTTQEEPKTKRS
        RGKKRSTSLDDTTQEEPKTKRS
Subjt:  RGKKRSTSLDDTTQEEPKTKRS
A0A1S3B2P2 uncharacterized protein LOC103485133 isoform X11.1e-0736.2Show/hide
Query:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGK-----------------------------------------------------------------TADL
        ME W S++VSV  LIVKLEETVKK+K VSGK                                                                 T D 
Subjt:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGK-----------------------------------------------------------------TADL

Query:  DTEARGKKRSTSLDDTTQEEPKTKRSRTNNSEEGSSSGGFRLVDLIVKVEEVVKKLKGVDRKK
         +  R + RS SLDDT++ E + KR +    +EG SSG  RL DLI +VEE+VKKLKGVD KK
Subjt:  DTEARGKKRSTSLDDTTQEEPKTKRSRTNNSEEGSSSGGFRLVDLIVKVEEVVKKLKGVDRKK
A0A5A7UTH3 p551.1e-0736.2Show/hide
Query:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGK-----------------------------------------------------------------TADL
        ME W S++VSV  LIVKLEETVKK+K VSGK                                                                 T D 
Subjt:  MEGWGSKSVSVDVLIVKLEETVKKLKRVSGK-----------------------------------------------------------------TADL

Query:  DTEARGKKRSTSLDDTTQEEPKTKRSRTNNSEEGSSSGGFRLVDLIVKVEEVVKKLKGVDRKK
         +  R + RS SLDDT++ E + KR +    +EG SSG  RL DLI +VEE+VKKLKGVD KK
Subjt:  DTEARGKKRSTSLDDTTQEEPKTKRSRTNNSEEGSSSGGFRLVDLIVKVEEVVKKLKGVDRKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGCTGGGGATCCAAAAGCGTGTCAGTGGATGTTCTGATAGTGAAATTGGAGGAAACGGTTAAGAAGCTGAAAAGAGTTAGCGGAAAAACTGCTGATTTGGATAC
TGAAGCCCGTGGCAAGAAGAGGTCAACTAGCCTCGACGACACCACCCAAGAGGAGCCGAAAACCAAACGGTCACGAACCAACAACTCAGAGGAGGGTTCGAGCTCGGGTG
GCTTTCGATTGGTTGATTTGATAGTGAAAGTGGAGGAAGTGGTTAAGAAGCTGAAAGGCGTGGACAGGAAAAAGGGTTTGGGAAGTGAAGTTTCTATTAACTTCAGTTCT
ACTACTTCTAATGGTACAACTGCTGATGGTAATGAAGAGAAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGCTGGGGATCCAAAAGCGTGTCAGTGGATGTTCTGATAGTGAAATTGGAGGAAACGGTTAAGAAGCTGAAAAGAGTTAGCGGAAAAACTGCTGATTTGGATAC
TGAAGCCCGTGGCAAGAAGAGGTCAACTAGCCTCGACGACACCACCCAAGAGGAGCCGAAAACCAAACGGTCACGAACCAACAACTCAGAGGAGGGTTCGAGCTCGGGTG
GCTTTCGATTGGTTGATTTGATAGTGAAAGTGGAGGAAGTGGTTAAGAAGCTGAAAGGCGTGGACAGGAAAAAGGGTTTGGGAAGTGAAGTTTCTATTAACTTCAGTTCT
ACTACTTCTAATGGTACAACTGCTGATGGTAATGAAGAGAAAAAATAA
Protein sequenceShow/hide protein sequence
MEGWGSKSVSVDVLIVKLEETVKKLKRVSGKTADLDTEARGKKRSTSLDDTTQEEPKTKRSRTNNSEEGSSSGGFRLVDLIVKVEEVVKKLKGVDRKKGLGSEVSINFSS
TTSNGTTADGNEEKK