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CSPI01G10470 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G10470
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionp55
Genome locationChr1:6586089..6586835
RNA-Seq ExpressionCSPI01G10470
SyntenyCSPI01G10470
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056836.1 p55 [Cucumis melo var. makuwa]1.6e-0643.69Show/hide
Query:  EGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGD------HQRSEVSVKDSSTT----NEAADRSVEENK
        E +SS G    DLI K+E+ ++ +K    + D LVS PLLACFV+AQTLL+ CT +L   STG       HQ S+ S+   STT    + AA     E K
Subjt:  EGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGD------HQRSEVSVKDSSTT----NEAADRSVEENK

Query:  IKK
         KK
Subjt:  IKK

KGN64496.1 hypothetical protein Csa_013860 [Cucumis sativus]5.4e-0746.94Show/hide
Query:  EGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGD-----HQRSEVSVKDSSTTNEAADRSVEENKIKK
        E  SS      DLI K+E+ V+ +K    +KD LVS PLLACFV+AQ LL  CT +L   ST       HQ S++S+   STT  AA  S E  KIKK
Subjt:  EGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGD-----HQRSEVSVKDSSTTNEAADRSVEENKIKK

KGN64499.1 hypothetical protein Csa_013478 [Cucumis sativus]1.8e-0540.87Show/hide
Query:  NIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGDHQRSEVSVKDSS
        N +  N+ LI    KSN  ++ +V+GSSS   AT DLI+K EET++K+KS   +KDNL +  LL CF +AQTLLV CT  L      +++++      SS
Subjt:  NIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGDHQRSEVSVKDSS

Query:  TTNEAADRSVEENKI
         T    D  V+ N++
Subjt:  TTNEAADRSVEENKI

KGN64500.1 hypothetical protein Csa_014086 [Cucumis sativus]9.8e-6599.26Show/hide
Query:  MSRWDKEFDDKAQHNMSNRNIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQL
        MSRWDKEFDDKAQHNMSNRNIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKS WCRKDNLVSSPLLACFVAAQTLLVVCTIQL
Subjt:  MSRWDKEFDDKAQHNMSNRNIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQL

Query:  FYTSTGDHQRSEVSVKDSSTTNEAADRSVEENKIKK
        FYTSTGDHQRSEVSVKDSSTTNEAADRSVEENKIKK
Subjt:  FYTSTGDHQRSEVSVKDSSTTNEAADRSVEENKIKK

TrEMBL top hitse value%identityAlignment
A0A0A0LRJ2 Uncharacterized protein4.7e-6599.26Show/hide
Query:  MSRWDKEFDDKAQHNMSNRNIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQL
        MSRWDKEFDDKAQHNMSNRNIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKS WCRKDNLVSSPLLACFVAAQTLLVVCTIQL
Subjt:  MSRWDKEFDDKAQHNMSNRNIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQL

Query:  FYTSTGDHQRSEVSVKDSSTTNEAADRSVEENKIKK
        FYTSTGDHQRSEVSVKDSSTTNEAADRSVEENKIKK
Subjt:  FYTSTGDHQRSEVSVKDSSTTNEAADRSVEENKIKK

A0A0A0LU71 Uncharacterized protein8.5e-0640.87Show/hide
Query:  NIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGDHQRSEVSVKDSS
        N +  N+ LI    KSN  ++ +V+GSSS   AT DLI+K EET++K+KS   +KDNL +  LL CF +AQTLLV CT  L      +++++      SS
Subjt:  NIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGDHQRSEVSVKDSS

Query:  TTNEAADRSVEENKI
         T    D  V+ N++
Subjt:  TTNEAADRSVEENKI

A0A0A0LX14 p552.6e-0746.94Show/hide
Query:  EGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGD-----HQRSEVSVKDSSTTNEAADRSVEENKIKK
        E  SS      DLI K+E+ V+ +K    +KD LVS PLLACFV+AQ LL  CT +L   ST       HQ S++S+   STT  AA  S E  KIKK
Subjt:  EGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGD-----HQRSEVSVKDSSTTNEAADRSVEENKIKK

A0A5D3BJN2 p557.7e-0743.69Show/hide
Query:  EGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGD------HQRSEVSVKDSSTT----NEAADRSVEENK
        E +SS G    DLI K+E+ ++ +K    + D LVS PLLACFV+AQTLL+ CT +L   STG       HQ S+ S+   STT    + AA     E K
Subjt:  EGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGD------HQRSEVSVKDSSTT----NEAADRSVEENK

Query:  IKK
         KK
Subjt:  IKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGATGGGATAAGGAGTTTGATGATAAGGCACAACACAATATGAGCAATAGGAATATTGATGTGATGAACGAACCACTTATTTCTGTCTCTAAGAAAAGCAACGA
GAATCAAAACTTAAAAGTGGAGGGTTCGAGCTCCAAAGGCAAAGCAACAGATGATCTGATAGTGAAAATGGAGGAAACTGTTGAGAAGATGAAAAGCGCGTGGTGTAGAA
AGGATAATTTGGTGAGTAGTCCTTTGTTGGCTTGCTTTGTGGCTGCACAGACCCTGCTCGTGGTTTGTACTATCCAGCTTTTCTACACATCAACCGGAGATCACCAGCGC
AGTGAAGTTTCTGTTAAAGACAGTTCTACTACTAATGAAGCTGCTGATAGAAGTGTAGAGGAAAATAAGATTAAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
TATAAATATGAGTAGATGGGATAAGGAGTTTGATGATAAGGCACAACACAATATGAGCAATAGGAATATTGATGTGATGAACGAACCACTTATTTCTGTCTCTAAGAAAA
GCAACGAGAATCAAAACTTAAAAGTGGAGGGTTCGAGCTCCAAAGGCAAAGCAACAGATGATCTGATAGTGAAAATGGAGGAAACTGTTGAGAAGATGAAAAGCGCGTGG
TGTAGAAAGGATAATTTGGTGAGTAGTCCTTTGTTGGCTTGCTTTGTGGCTGCACAGACCCTGCTCGTGGTTTGTACTATCCAGCTTTTCTACACATCAACCGGAGATCA
CCAGCGCAGTGAAGTTTCTGTTAAAGACAGTTCTACTACTAATGAAGCTGCTGATAGAAGTGTAGAGGAAAATAAGATTAAAAAGTAGAAATTTCATATTATAATAAATG
CAATCTTTGATTGCATCCACATCTCATGCATCTCTTTAGGGTTTAAGTACTTTTTGTTTTGTTGAAATAGAATTATTGTTATTATTTCATATAATTGAAGTGATTTTGGT
AGTGTCCCTAGCTCTCAAGGGTTAGCTCCGAGTTCGACATTCTCCATCTGAAATTTGAGGGTTCTTGCAGGGGATTTTTCTCAGCAATGAAACTATTTCTCATGAAATAA
GACGAATTAATTTCACTAGTTTGCCAAGAAGAATCACTTGAATCCCCGGCAAAGGTCTCATAACACAGAACCAAAAGAAAATGAAGC
Protein sequenceShow/hide protein sequence
MSRWDKEFDDKAQHNMSNRNIDVMNEPLISVSKKSNENQNLKVEGSSSKGKATDDLIVKMEETVEKMKSAWCRKDNLVSSPLLACFVAAQTLLVVCTIQLFYTSTGDHQR
SEVSVKDSSTTNEAADRSVEENKIKK