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CSPI01G11540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G11540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEF-hand domain-containing protein
Genome locationChr1:7250153..7250605
RNA-Seq ExpressionCSPI01G11540
SyntenyCSPI01G11540
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056934.1 calcium-binding protein PBP1 [Cucumis melo var. makuwa]1.3e-5290.6Show/hide
Query:  GGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMH
        GG+SG  VV+FKDFFP+MLEKLG KGFIKELR GF LLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMV+EGDLDGDGALSEAEFFILMIKLSPGFMH
Subjt:  GGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMH

Query:  LSSSLFHQSHSDRKFTK
        LSSS FHQSH DRKFTK
Subjt:  LSSSLFHQSHSDRKFTK

KAE8652697.1 hypothetical protein Csa_014317 [Cucumis sativus]2.9e-5796.64Show/hide
Query:  MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGF
        MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGF
Subjt:  MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGF

Query:  MHLSSSLFHQSHSDRKFTK
        MHLSSS FHQSHSDR   K
Subjt:  MHLSSSLFHQSHSDRKFTK

KAG6573227.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. sororia]8.6e-3371.43Show/hide
Query:  SGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSS
        S   VVLF+DFFP M+EKLG KGF++ELRYGFRLLMDKEKGVITAESLR  M F G  L++EE M MV+EGDLDGDGALSEAEF +LM KLSPG M LS+
Subjt:  SGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSS

Query:  SLFHQSHSDRKF
         LF Q    RKF
Subjt:  SLFHQSHSDRKF

KAG7012400.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-3371.43Show/hide
Query:  SGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSS
        S   VVLF+DFFP M+EKLG KGF++ELRYGFRLLMDKEKGVITAESLR  M F G  L++EE M MV+EGDLDGDGALSEAEF +LM KLSPG M LS+
Subjt:  SGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSS

Query:  SLFHQSHSDRKF
         LF Q    RKF
Subjt:  SLFHQSHSDRKF

XP_038895967.1 calcium-binding protein PBP1-like [Benincasa hispida]3.7e-3673.21Show/hide
Query:  SGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSS
        SG  VV FKDFFPEM+EKLG KGF+KELR GF L+MDKEKG+IT ESLRKNM F GL+LEDEEVM MV+EGDLDGDGAL+EAEF ILMI+LSP       
Subjt:  SGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSS

Query:  SLFHQSHSDRKF
        +LFHQSH D+ F
Subjt:  SLFHQSHSDRKF

TrEMBL top hitse value%identityAlignment
A0A0A0LV00 EF-hand domain-containing protein8.9e-6099.16Show/hide
Query:  MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGF
        MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGF
Subjt:  MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGF

Query:  MHLSSSLFHQSHSDRKFTK
        MHLSSS FHQSHSDRKFTK
Subjt:  MHLSSSLFHQSHSDRKFTK

A0A5A7UNY8 Calcium-binding protein PBP16.2e-5390.6Show/hide
Query:  GGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMH
        GG+SG  VV+FKDFFP+MLEKLG KGFIKELR GF LLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMV+EGDLDGDGALSEAEFFILMIKLSPGFMH
Subjt:  GGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMH

Query:  LSSSLFHQSHSDRKFTK
        LSSS FHQSH DRKFTK
Subjt:  LSSSLFHQSHSDRKFTK

A0A6J1JUT4 calcium-binding protein KIC-like7.6e-2780.49Show/hide
Query:  VVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFI
        VVLF+DFFP M+EKLG KGF++ELRYGFRLLMDKEKGVITAESLR  M F G  LE+EE M MV EGDLDGDGALSEAEFFI
Subjt:  VVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFI

A0A7N2LV84 EF-hand domain-containing protein4.9e-2658.33Show/hide
Query:  LSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHL
        +  ++ V+F+DFFP M+EKLGA+GF+KEL  GFRLLMD+EKGVIT +SL++N    GL  + DEE+M M++EGDLDGDGAL+E EF  LM +LSPG M  
Subjt:  LSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHL

Query:  SSSLFHQS
        SS L  ++
Subjt:  SSSLFHQS

B9SFE8 Ccd1, putative4.9e-2662.38Show/hide
Query:  LSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHL
        ++ +D V+F+DFFP M+EKLGA GF+KEL  GFRLLMD+EKGVIT ESL++N    GL  + D+EVM M++EGDLDGDGAL+E EF  LM +LSPG M  
Subjt:  LSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHL

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP15.6e-1955.67Show/hide
Query:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSL
        F DF P M   LG +G I EL  GF LLMD+EKGVIT ESLR+N     GL  L DE+V  M+KEGD D DGAL++ EF +LM +LSP  M  S  L
Subjt:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSL

P43645 Caltractin (Fragment)2.8e-1037.36Show/hide
Query:  GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLS
        G   + F++F   M  K+G +   +E+   FRL  D + G IT ++L++  +  G  L DEE+  M+ E D DGDG ++E EFF +M K S
Subjt:  GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLS

Q06827 Caltractin1.4e-0936.26Show/hide
Query:  GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLS
        G   + F++F   M  K+G +   +E+   FRL  D E G I+ ++L++  +  G  + DEE+  M+ E D DGDG ++E EFF +M K S
Subjt:  GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLS

Q9LSQ6 Calcium-binding protein PBP16.7e-2055.32Show/hide
Query:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLS
        F+DFFP M  KLG +G I+E+  GF LLMDK+KGVIT ESLR+N     GL  L D++V +M+ EGD D DGAL++ EF +LM +LSP  M  S
Subjt:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLS

Q9ZPX9 Calcium-binding protein KIC3.1e-1748.89Show/hide
Query:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFM
        ++D  P M EK+  + F+ EL  GF LL D E+ +ITAESLR+N    G+  +  E+   MV+EGDLDGDGAL++ EF +LM++LSP  M
Subjt:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFM

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 43.5e-0835.23Show/hide
Query:  GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMI
        G   + F +F   M +K+      +EL+  FR+    + G I+A  LR  M   G  L DEEV  M++E D+DGDG ++  EF  +M+
Subjt:  GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMI

AT1G66410.2 calmodulin 43.5e-0835.23Show/hide
Query:  GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMI
        G   + F +F   M +K+      +EL+  FR+    + G I+A  LR  M   G  L DEEV  M++E D+DGDG ++  EF  +M+
Subjt:  GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMI

AT2G46600.1 Calcium-binding EF-hand family protein2.2e-1848.89Show/hide
Query:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFM
        ++D  P M EK+  + F+ EL  GF LL D E+ +ITAESLR+N    G+  +  E+   MV+EGDLDGDGAL++ EF +LM++LSP  M
Subjt:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFM

AT4G27280.1 Calcium-binding EF-hand family protein4.0e-2055.67Show/hide
Query:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSL
        F DF P M   LG +G I EL  GF LLMD+EKGVIT ESLR+N     GL  L DE+V  M+KEGD D DGAL++ EF +LM +LSP  M  S  L
Subjt:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSL

AT5G54490.1 pinoid-binding protein 14.7e-2155.32Show/hide
Query:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLS
        F+DFFP M  KLG +G I+E+  GF LLMDK+KGVIT ESLR+N     GL  L D++V +M+ EGD D DGAL++ EF +LM +LSP  M  S
Subjt:  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAGGATTATCAGGAAAAGATGTCGTTTTATTCAAAGATTTCTTCCCTGAAATGTTGGAGAAACTGGGAGCTAAAGGGTTCATTAAGGAATTGAGATAT
GGGTTTCGCTTGCTGATGGATAAAGAAAAAGGTGTCATAACTGCAGAGAGTTTGAGAAAAAACATGAGATTTTTTGGATTAGTATTAGAAGATGAAGAAGTGATG
TGGATGGTTAAAGAAGGAGATTTGGATGGAGATGGAGCTTTGAGTGAAGCTGAATTTTTTATTCTTATGATCAAACTTAGCCCTGGATTCATGCATTTATCTTCA
TCTTTGTTTCATCAATCTCATTCGGATAGAAAGTTTACCAAATAA
mRNA sequenceShow/hide mRNA sequence
TTCTCATCTTCCATTATTCTTCCAATTCTCTAACAATCTCCAAAAACACATTATATATTTTCCCACAATATGGGAGGAGGATTATCAGGAAAAGATGTCGTTTTA
TTCAAAGATTTCTTCCCTGAAATGTTGGAGAAACTGGGAGCTAAAGGGTTCATTAAGGAATTGAGATATGGGTTTCGCTTGCTGATGGATAAAGAAAAAGGTGTC
ATAACTGCAGAGAGTTTGAGAAAAAACATGAGATTTTTTGGATTAGTATTAGAAGATGAAGAAGTGATGTGGATGGTTAAAGAAGGAGATTTGGATGGAGATGGA
GCTTTGAGTGAAGCTGAATTTTTTATTCTTATGATCAAACTTAGCCCTGGATTCATGCATTTATCTTCATCTTTGTTTCATCAATCTCATTCGGATAGAAAGTTT
ACCAAATAATACAACTTTGTATATATTAATGTG
Protein sequenceShow/hide protein sequence
MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSS
SLFHQSHSDRKFTK