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CSPI01G11960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G11960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:7534440..7534772
RNA-Seq ExpressionCSPI01G11960
SyntenyCSPI01G11960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13990.1 uncharacterized protein E5676_scaffold1119G00150 [Cucumis melo var. makuwa]8.7e-0945.98Show/hide
Query:  ELLDCRSDTSYTSKANIEFLKERAPHSLHKLLLPKKFIKIFLRFPTQRATKRLDKRSSSPNKPINCIIRPRKTCQIKNLAFLGTLVL
        ELL+  ++TS  SK NIE  +ERAPH L  L L K+ IK+FL   T+  TKR  K    P+K IN I   ++    K+LAF  TL+L
Subjt:  ELLDCRSDTSYTSKANIEFLKERAPHSLHKLLLPKKFIKIFLRFPTQRATKRLDKRSSSPNKPINCIIRPRKTCQIKNLAFLGTLVL
TrEMBL top hitse value%identityAlignment
A0A5D3CRG7 Uncharacterized protein4.2e-0945.98Show/hide
Query:  ELLDCRSDTSYTSKANIEFLKERAPHSLHKLLLPKKFIKIFLRFPTQRATKRLDKRSSSPNKPINCIIRPRKTCQIKNLAFLGTLVL
        ELL+  ++TS  SK NIE  +ERAPH L  L L K+ IK+FL   T+  TKR  K    P+K IN I   ++    K+LAF  TL+L
Subjt:  ELLDCRSDTSYTSKANIEFLKERAPHSLHKLLLPKKFIKIFLRFPTQRATKRLDKRSSSPNKPINCIIRPRKTCQIKNLAFLGTLVL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGGAGAACTCCTCGATTGTCGCTCTGACACTTCGTATACCAGCAAAGCTAACATCGAATTCTTGAAGGAAAGAGCTCCACACAGCCTTCACAAACTGTTACT
CCCAAAAAAGTTTATCAAGATTTTCCTCCGCTTTCCAACCCAACGTGCAACAAAAAGGCTCGACAAGCGAAGTTCCTCTCCTAACAAGCCTATCAATTGCATAATCAGAC
CAAGAAAGACTTGCCAGATAAAGAATCTAGCTTTCTTAGGAACTTTAGTCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAGGAGAACTCCTCGATTGTCGCTCTGACACTTCGTATACCAGCAAAGCTAACATCGAATTCTTGAAGGAAAGAGCTCCACACAGCCTTCACAAACTGTTACT
CCCAAAAAAGTTTATCAAGATTTTCCTCCGCTTTCCAACCCAACGTGCAACAAAAAGGCTCGACAAGCGAAGTTCCTCTCCTAACAAGCCTATCAATTGCATAATCAGAC
CAAGAAAGACTTGCCAGATAAAGAATCTAGCTTTCTTAGGAACTTTAGTCCTCTAAACCACACCAAAAACCGACTTCTTAGGGGGAGTGGGATCTAACAACAACCTTCTT
TGT
Protein sequenceShow/hide protein sequence
MDGGELLDCRSDTSYTSKANIEFLKERAPHSLHKLLLPKKFIKIFLRFPTQRATKRLDKRSSSPNKPINCIIRPRKTCQIKNLAFLGTLVL