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CSPI01G12520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G12520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:7968076..7968919
RNA-Seq ExpressionCSPI01G12520
SyntenyCSPI01G12520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652730.1 hypothetical protein Csa_013247 [Cucumis sativus]5.5e-3197.56Show/hide
Query:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETP--TSTSTSTSTSTSTTPAPGTSGYNSEAQPES
        MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETP  TSTSTSTSTSTSTTPAPGTSGYNSEAQPES
Subjt:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETP--TSTSTSTSTSTSTTPAPGTSGYNSEAQPES
KAG6583473.1 hypothetical protein SDJN03_19405, partial [Cucurbita argyrosperma subsp. sororia]3.9e-0548.68Show/hide
Query:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEA
        MNS+ D +KR  E PPRRG + I IFRSIF+TVK       RSRR                   PAPG+SGYNSEA
Subjt:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEA
KAG6607199.1 hypothetical protein SDJN03_00541, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0651.32Show/hide
Query:  KDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEAQPES
        K P++R +E PPRRG I I IF+SIFRT K +PEGF   RR++E        + T +  TPA  +SGYNSE Q ES
Subjt:  KDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEAQPES
TYK08469.1 hypothetical protein E5676_scaffold74032G00010 [Cucumis melo var. makuwa]7.1e-2382.5Show/hide
Query:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEAQPES
        MNS K+PRKR  EFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDE        T TSTSTTPAPGTSGYNSEAQ ES
Subjt:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEAQPES
TrEMBL top hitse value%identityAlignment
A0A0A0LV79 Uncharacterized protein1.4e-2995Show/hide
Query:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEAQPES
        MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETP    TSTSTSTSTTPAPGTSGYNSEAQPES
Subjt:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEAQPES
A0A5D3CDP6 Uncharacterized protein3.5e-2382.5Show/hide
Query:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEAQPES
        MNS K+PRKR  EFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDE        T TSTSTTPAPGTSGYNSEAQ ES
Subjt:  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEAQPES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCATCAAGGACCCGAGGAAGCGGCAGGCGGAATTCCCGCCTCGACGGGGTTTGATCAAGATCAAGATCTTCCGGAGCATTTTCAGGACGGTCAAATCCATACC
GGAAGGATTCGCAAGAAGCCGGCGGGAAGACGAAACTCCAACTTCCACTTCCACTTCCACTTCCACTTCAACTTCGACAACGCCGGCTCCAGGTACTAGCGGGTATAACT
CGGAAGCTCAGCCCGAGTCATGA
mRNA sequenceShow/hide mRNA sequence
CTCTTCTTTCTCTTTAAAAGCCCATTTCATTTTCTTTAATTTCCCCATTTCCTAAGGTTCAAACAAGCTCAACCGCTGCCGTCAAATCCCCACATTCTCGGCCGCCTTCT
TACTCCTTCACTCAATTTCCATTTCTTCCACCTATTCCCTCCATTTCAATGAATTCCATCAAGGACCCGAGGAAGCGGCAGGCGGAATTCCCGCCTCGACGGGGTTTGAT
CAAGATCAAGATCTTCCGGAGCATTTTCAGGACGGTCAAATCCATACCGGAAGGATTCGCAAGAAGCCGGCGGGAAGACGAAACTCCAACTTCCACTTCCACTTCCACTT
CCACTTCAACTTCGACAACGCCGGCTCCAGGTACTAGCGGGTATAACTCGGAAGCTCAGCCCGAGTCATGAGGAAGAGTTCCTGAGTCGATCGGAATCATGAACTTGCTC
TTTGAATTTGTGGCCAATTTTTTATCGGGGTCTCGCTACCTACCTATGAACTTCACACCATAACCATAAACTTTTCCCTTTCTTCTTCTTCTTTAAAATTCTTTTTGTTT
TTATTTGTTAAATGTATAATTCTTGAGACCCCCGTTTCTGTTGATTTAGGCTTAGATTGTAATTAATTTTAATTACACTATAATTTTTTTACACAACTTGAGTGGATCTT
GTCTCTTGTTATGTGGATATTGTATTTGGAATTTTGGGAAGAATGTTTGAAAATTACCCATTGAATTAGATCGAGCTAAAAACACTCTCTGTTCAGTTCAAAACGAGATC
GCAAGGGTGAAAAACAGTGTATTTTGAATTCAAAACTGTGAAACGGAATGCAATTTGTCATTATAAATTGGGCC
Protein sequenceShow/hide protein sequence
MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTTPAPGTSGYNSEAQPES