; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G12530 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G12530
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionYrdC-like domain-containing protein
Genome locationChr1:7978242..7981917
RNA-Seq ExpressionCSPI01G12530
SyntenyCSPI01G12530
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64727.2 hypothetical protein Csa_013125 [Cucumis sativus]4.5e-14999.64Show/hide
Query:  MADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAE
        MADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+CDACSAE
Subjt:  MADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAE

Query:  AVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL
        AVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL
Subjt:  AVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL

Query:  SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
        SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
Subjt:  SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI

XP_004148791.1 yrdC domain-containing protein, mitochondrial isoform X1 [Cucumis sativus]3.9e-15399.64Show/hide
Query:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+
Subjt:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI

XP_008465284.1 PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo]6.5e-14895.73Show/hide
Query:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+
Subjt:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI

XP_031742584.1 yrdC domain-containing protein, mitochondrial isoform X2 [Cucumis sativus]7.0e-14299.61Show/hide
Query:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+
Subjt:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAG
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAG
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAG

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]6.3e-14391.81Show/hide
Query:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        MN LPAKM +SLSLIRTF TFPSS LGS NYG+VSFLQ+NRGSRVSF KT WSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+
Subjt:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACS+EAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTE+GT+KI+RAGSA+EQT+A LERYSLLE AA+I
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein1.9e-15399.64Show/hide
Query:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+
Subjt:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI

A0A1S3CNI2 yrdC domain-containing protein, mitochondrial3.2e-14895.73Show/hide
Query:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+
Subjt:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI

A0A5A7T5W1 YrdC domain-containing protein3.2e-14895.73Show/hide
Query:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        MNTLPAKMADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+
Subjt:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIATL+RYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI

A0A5D3DCB7 YrdC domain-containing protein3.0e-13883.44Show/hide
Query:  MADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDAC---
        MADSLSLIRTF TFPSS LGSSNYGIVSFLQRNRGSRVSFLKT+WSLEKCCM VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGL+CDAC   
Subjt:  MADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDAC---

Query:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSV
                                             SAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSV
Subjt:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSV

Query:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIA
        LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSAE+QTIA
Subjt:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIA

Query:  TLERYSLLEAAATI
        TL+RYSLLEAAATI
Subjt:  TLERYSLLEAAATI

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial2.0e-13488.13Show/hide
Query:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        MNT PAKM + LSLIRTF TFPSSQLG+ NYG VSFL  NRGSR++F KT WSLEKC MRVEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGL+
Subjt:  MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACS+EAV+RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRS TAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAA
        ALTSANLSG+PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLT++G FKIIRAGSA+EQT+ATLERYSLLE A
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAA

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial9.7e-4648.02Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGL+C A  +EA+  +Y +KGR  T PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYS
        +G+R+PD  F++ +++     LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST++DL+  G F IIR G A E T A L+ Y 
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYS

Query:  LL
        LL
Subjt:  LL

Q3U5F4 YrdC domain-containing protein, mitochondrial2.9e-4246.31Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGL+C A S+ A+  +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATL-ERY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G F IIR G A E T + L ++Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATL-ERY

Query:  SLL
         LL
Subjt:  SLL

Q499R4 YrdC domain-containing protein, mitochondrial2.2e-4246.31Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGL+C A  + A+  +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLE-RY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G F IIR+G A E T A L+ +Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLE-RY

Query:  SLL
         LL
Subjt:  SLL

Q60369 Putative threonylcarbamoyl-AMP synthase5.8e-2236.22Show/hide
Query:  GKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRV
        GK++   TDTLYG+S +A + +AV ++Y IK R+   PL+ICV D ++I ++A  + L   ++D  LPGP+T++LK+  G   ++ K      D IG+R+
Subjt:  GKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRV

Query:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIA
        PD   IR +   S   L  TSAN+SG+ S   V++ +  + +   YV D G     +  STII + E      IR G    Q +A
Subjt:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIA

Q86U90 YrdC domain-containing protein, mitochondrial2.0e-4346.63Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGL+C A  + A+  +Y +KGR    PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATL-ERY
        +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST++DL+  G F IIR G A E T A L ++Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATL-ERY

Query:  SLLEAAAT
         LL + A+
Subjt:  SLLEAAAT

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain4.0e-1029.52Show/hide
Query:  QEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSG----------LLDSLLPGPVTVVLKR----
        Q   D LK G V  +PTDT+Y ++CD  +  AV R+  IK  + + PL+I    + DI  F  T   P G           +   LPGP T +L      
Subjt:  QEATDALKAGKVIAVPTDTLYGLSCDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSG----------LLDSLLPGPVTVVLKR----

Query:  -------GESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIIDLTEQ
               G +SV   S      ++GVR+ D    + I ++ +  L  TS  + G   +  + D   +      +   +V DGG+  A    STI+D+T  
Subjt:  -------GESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIIDLTEQ

Query:  GTF-KIIRAG
        G + K+IR G
Subjt:  GTF-KIIRAG

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain4.8e-4056.79Show/hide
Query:  LPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTN-WSLEKC--CMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        L  ++A+ L  I    + P  + G S     S   ++R  R    K   WSLE+   C+  ++CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG +
Subjt:  LPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTN-WSLEKC--CMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR
        CDACS EAV RIYEIKGRKLTSPLAICVGDV DI R A T HLP GLLDSLLPGPVT+VL+R
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain1.0e-9063.04Show/hide
Query:  LPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTN-WSLEKC--CMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS
        L  ++A+ L  I    + P  + G S     S   ++R  R    K   WSLE+   C+  ++CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG +
Subjt:  LPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTN-WSLEKC--CMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLS

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACS EAV RIYEIKGRKLTSPLAICVGDV DI R A T HLP GLLDSLLPGPVT+VL+RGESS+L+KSLNPG+ +IGVRVPD +FIR +SR S + L
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLE
        ALTSANLSG  SSVCV DFENLWQHCAYVYDGG+LP+GRAGSTI+DLT+ G +KIIR GSA++ T+A LE+Y L E
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTACAACTTTTCCCTCTTCTCAACTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTT
GCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGAATTGGAGTTTAGAGAAGTGTTGTATGCGTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAG
CTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTTTATGGACTCTCTTGTGATGCTTGTTCTGCTGAAGCAGTCCAT
AGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGCTTTGCTGTAACAGACCATTTGCCTTCTGGTTT
GCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTGAATCGAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTTCGTGTAC
CTGATGCTGACTTTATTCGGCTGATTTCACGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAA
AATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCAACGATCATCGACCTCACTGAGCAAGGCACATTTAAGATTATAAG
AGCTGGAAGTGCAGAGGAGCAGACTATTGCAACACTTGAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTACAACTTTTCCCTCTTCTCAACTGGGTTCTTCCAATTATGGGATAGTTTCGTTCTT
GCAACGAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGAATTGGAGTTTAGAGAAGTGTTGTATGCGTGTGGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAG
CTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTTTATGGACTCTCTTGTGATGCTTGTTCTGCTGAAGCAGTCCAT
AGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGCTTTGCTGTAACAGACCATTTGCCTTCTGGTTT
GCTTGATTCTCTCCTTCCTGGGCCTGTGACTGTTGTTCTGAAAAGAGGTGAATCGAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTTCGTGTAC
CTGATGCTGACTTTATTCGGCTGATTTCACGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAA
AATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCAACGATCATCGACCTCACTGAGCAAGGCACATTTAAGATTATAAG
AGCTGGAAGTGCAGAGGAGCAGACTATTGCAACACTTGAAAGGTATTCACTATTAGAAGCAGCAGCTACTATTTGA
Protein sequenceShow/hide protein sequence
MNTLPAKMADSLSLIRTFTTFPSSQLGSSNYGIVSFLQRNRGSRVSFLKTNWSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLSCDACSAEAVH
RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE
NLWQHCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAATI