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CSPI01G13280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G13280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:8764504..8768193
RNA-Seq ExpressionCSPI01G13280
SyntenyCSPI01G13280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652754.1 hypothetical protein Csa_013315 [Cucumis sativus]1.3e-5197.35Show/hide
Query:  MIKGAGAFAAECHLGKPYNFRALPFLLQLLIKTYKIGSNISPNPLLIILFHFLRFSLNSSFITCSSKIPYLIFLLSRCLSLDFLFRNNNSSLISLCVPLL
        MIKGAGAFAAECHLGKPYNFRALPFLLQLLIKTYKIGSNISPNPLLIILF FLRFSLNSSFIT SSKIPYLIFLLSRCLSLDFLFRNNN+SLISLCVPLL
Subjt:  MIKGAGAFAAECHLGKPYNFRALPFLLQLLIKTYKIGSNISPNPLLIILFHFLRFSLNSSFITCSSKIPYLIFLLSRCLSLDFLFRNNNSSLISLCVPLL

Query:  EMTTTTASRDVLC
        EMTTTTASRDVLC
Subjt:  EMTTTTASRDVLC
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAAGGTGCTGGTGCATTTGCAGCTGAATGCCATCTTGGAAAACCCTATAACTTTAGGGCTTTACCTTTTCTTCTCCAACTTCTTATCAAAACCTACAAAATTGG
ATCCAACATATCACCAAACCCCCTCTTAATTATATTATTTCATTTTCTTCGTTTCTCTCTCAACTCTAGTTTTATTACTTGCTCATCTAAAATTCCCTACCTTATCTTTT
TACTCTCTAGATGTCTTTCCTTGGATTTCCTCTTTCGCAACAACAATAGTTCTCTCATCTCTCTCTGTGTTCCTCTTTTGGAGATGACAACAACGACAGCGAGCAGAGAT
GTGTTGTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAAAGGTGCTGGTGCATTTGCAGCTGAATGCCATCTTGGAAAACCCTATAACTTTAGGGCTTTACCTTTTCTTCTCCAACTTCTTATCAAAACCTACAAAATTGG
ATCCAACATATCACCAAACCCCCTCTTAATTATATTATTTCATTTTCTTCGTTTCTCTCTCAACTCTAGTTTTATTACTTGCTCATCTAAAATTCCCTACCTTATCTTTT
TACTCTCTAGATGTCTTTCCTTGGATTTCCTCTTTCGCAACAACAATAGTTCTCTCATCTCTCTCTGTGTTCCTCTTTTGGAGATGACAACAACGACAGCGAGCAGAGAT
GTGTTGTGTTAGAAACGTATCAAGGTTTCAGATGCGAAAGTGATCAAGATCAACACAAGGCAGACAAATTCCATTCTTGTTTTGATTGTTTAAGTTGTTCCTCATTCTTG
ATACGGGAGCTTCACGGACCGACGCCTCCAAGCATGATGGATCCCATCAACACTCCTTCCTCGACTCAAATTGAAACTGAACCCACTACCAACCAAGAAATTCAACTTGA
CCCGAATAGATATCAAGTTTGGTCTGGTACTATGCCAGTCGGAACTCTAGAATTCACCAATCTTTTAAACCAATTCAAAACCACCAAGCTCGACAAGGGAAACTTCTCTT
TCTGAAAAAGCATTGCATTGTCCATTCTAAGAAGCCACAAGCTTGAGGGCCATCTGATGGGGAAAACAACATCCTTAGAGCAATGAATTATTATACCTCCATGCGAAGAT
GAACCTATGGTACTTCTTCGTAATCCTGAATATGACATCTGGTTGGCTGCTGACTAACTCCTTGTAGGGTGGTTATACAATTCGATGATCCCTGGCACCATTGCTACTCA
GGTCACGGGAAAAGATGAAGTTAAGATTTTGTGGGACTCGATCTAACAATACTTTTGGAATTCACTCAAGATTTCAAGAGAACTTCAACTGTCATGTTGCAGAGAACAAG
GAAAGTCAACTCCAAAATGGAAGACTATGTGTCTACAATGAAAGGTTACTTCGATAGCCTACAAATGGCTGGTTATACCATGGATATGCACATTCACATCATAATTACCC
CATCCATGTTTGTTTGCTCGATAAAAGCATGTATGGCCTTAAACCCAC
Protein sequenceShow/hide protein sequence
MIKGAGAFAAECHLGKPYNFRALPFLLQLLIKTYKIGSNISPNPLLIILFHFLRFSLNSSFITCSSKIPYLIFLLSRCLSLDFLFRNNNSSLISLCVPLLEMTTTTASRD
VLC