; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G13490 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G13490
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRegulator of rDNA transcription protein 15
Genome locationChr1:8954796..8955494
RNA-Seq ExpressionCSPI01G13490
SyntenyCSPI01G13490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7114875.1 hypothetical protein RHSIM_RhsimUnG0072500 [Rhododendron simsii]2.3e-7496.05Show/hide
Query:  RRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVM
        R  RIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVM
Subjt:  RRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVM

Query:  STTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        STTGR RHS+LRIFKGRRGRTGHHATCGALPA GPYLRLSRFQGGQAVKQKR
Subjt:  STTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

KAG6384448.1 hypothetical protein SASPL_155733 [Salvia splendens]1.5e-7394.16Show/hide
Query:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA
        SR+  RIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHA TRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA
Subjt:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA

Query:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        VMSTTGR RHS+LRIFKGRRGRTGHHATCGALPA GPYLRLSRFQGG+AVKQKR
Subjt:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

KAG6384450.1 hypothetical protein SASPL_155735 [Salvia splendens]6.6e-7494.81Show/hide
Query:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA
        SR+  RIPLVRTSSELTVRRPGKAPEG VPSPSP RHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA
Subjt:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA

Query:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        VMSTTGR RHS+LRIFKGRRGRTGHHATCGALPA GPYLRLSRFQGGQAVKQKR
Subjt:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

TKS01558.1 senescence-associated protein [Populus alba]9.5e-7388.41Show/hide
Query:  VTEVGSTTVVSRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPST
        V + G       R  RIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHA TRSRRGSSSSSPPTADGFGTGTP PSPQSQSFSRGYGSILPTSLAYIVPST
Subjt:  VTEVGSTTVVSRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPST

Query:  RGCSPWRPDAVMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        RGCSPWRPDAVMSTTGR RHS+LRIFKGRRGRTGHHATCGALPA GPYLRLSRFQGG+AVKQKR
Subjt:  RGCSPWRPDAVMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

TXG46534.1 hypothetical protein EZV62_027949 [Acer yangbiense]5.6e-7394.16Show/hide
Query:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA
        SR+  RIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR YGSILPTSLAYIVPSTRGCSPWRPDA
Subjt:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA

Query:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        VMSTTGR  HS+LRIFKGRRGRTGHHATCGALPA GPYLRLSRFQGGQAVKQKR
Subjt:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

TrEMBL top hitse value%identityAlignment
A0A2P5XL80 Uncharacterized protein6.0e-7393.51Show/hide
Query:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA
        SR+  RIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSS P ADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVP TRGCSPWRPDA
Subjt:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA

Query:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        VMSTTGR RHS+LRIFKGRRGRTGHHATCGALPA GPYLRLSRFQGGQAVKQKR
Subjt:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

A0A4U5Q770 Senescence-associated protein4.6e-7388.41Show/hide
Query:  VTEVGSTTVVSRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPST
        V + G       R  RIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHA TRSRRGSSSSSPPTADGFGTGTP PSPQSQSFSRGYGSILPTSLAYIVPST
Subjt:  VTEVGSTTVVSRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPST

Query:  RGCSPWRPDAVMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        RGCSPWRPDAVMSTTGR RHS+LRIFKGRRGRTGHHATCGALPA GPYLRLSRFQGG+AVKQKR
Subjt:  RGCSPWRPDAVMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

A0A4U5R2P0 Putative senescence-associated protein1.0e-7285.38Show/hide
Query:  AKSRSRRVTEVGSTTVVSRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSL
        ++SR+R   + G  + +     RIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHA TRSRRGSSSSSPPTADGFGTGTP PSPQSQSFSRGYGSILPTSL
Subjt:  AKSRSRRVTEVGSTTVVSRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSL

Query:  AYIVPSTRGCSPWRPDAVMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        AYIVPSTRGCSPWRPDAVMSTTGR RHS+LRIFKGRRGRTGHHATCGALPA GPYLRLSRFQGG+AVKQKR
Subjt:  AYIVPSTRGCSPWRPDAVMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

A0A5C7GNY8 Uncharacterized protein2.7e-7394.16Show/hide
Query:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA
        SR+  RIPLVRTSSE TVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR YGSILPTSLAYIVPSTRGCSPWRPDA
Subjt:  SRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDA

Query:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        VMSTTGR  HS+LRIFKGRRGRTGHHATCGALPA GPYLRLSRFQGGQAVKQKR
Subjt:  VMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

M1BN49 Cytochrome P450 like_TBP1.0e-7295.3Show/hide
Query:  RIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTT
        RIPLVRTSSEL VRRPGKAPEG VPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR YGSILPTSLAYIVPSTRGCSPWRPDAVMSTT
Subjt:  RIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTT

Query:  GRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
        GR RHS+LRIFKGRR RTGHHATCGALPA GPYLRLSRFQGGQAVKQKR
Subjt:  GRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGAAGTCGAGGTCGAGACGCGTCACCGAGGTTGGATCTACCACCGTAGTGTCGCGACGACGAGCTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGACTGT
TCGACGCCCGGGGAAGGCTCCCGAGGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTCCACCAACAGCCG
ACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGA
GGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAGAGGCACTCGATCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGAC
GTGCGGTGCTCTTCCAGCCACTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGAAGTCGAGGTCGAGACGCGTCACCGAGGTTGGATCTACCACCGTAGTGTCGCGACGACGAGCTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGACTGT
TCGACGCCCGGGGAAGGCTCCCGAGGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTCCACCAACAGCCG
ACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGA
GGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAGAGGCACTCGATCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGAC
GTGCGGTGCTCTTCCAGCCACTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA
Protein sequenceShow/hide protein sequence
MEAKSRSRRVTEVGSTTVVSRRRARIPLVRTSSELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSRGYGSILPTSLAYIVPSTR
GCSPWRPDAVMSTTGRERHSILRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR