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CSPI01G13640 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G13640
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSister chromatid cohesion protein PDS5-like protein A
Genome locationChr1:9167807..9168437
RNA-Seq ExpressionCSPI01G13640
SyntenyCSPI01G13640
Gene Ontology termsGO:0007064 - mitotic sister chromatid cohesion (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039776 - Sister chromatid cohesion protein Pds5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652769.1 hypothetical protein Csa_022895 [Cucumis sativus]1.3e-4497.87Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKKLMLHLLVAL
        MQSETNSATAYPEYILP+LVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTS+AAEERLKIFSDDKLEEKKLMLHLLVAL
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKKLMLHLLVAL

TYK30945.1 sister chromatid cohesion protein PDS5-like protein A [Cucumis melo var. makuwa]2.6e-1659.49Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRF--YENLRCSKEGLTSKAAEERLKIFS
        MQSETN  TAYPEYILP+LVHALAHHSCPDVDECKDV+AYELVYR+++ +     +++     E  ++K  E    IFS
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRF--YENLRCSKEGLTSKAAEERLKIFS

XP_038893525.1 sister chromatid cohesion protein PDS5 homolog B isoform X1 [Benincasa hispida]1.5e-1685.42Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETNS TAYPEYI+P+LVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY

XP_038893526.1 sister chromatid cohesion protein PDS5 homolog B isoform X2 [Benincasa hispida]1.5e-1685.42Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETNS TAYPEYI+P+LVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY

XP_038893527.1 sister chromatid cohesion protein PDS5 homolog B isoform X3 [Benincasa hispida]1.5e-1685.42Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETNS TAYPEYI+P+LVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ4 Uncharacterized protein6.4e-4597.87Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKKLMLHLLVAL
        MQSETNSATAYPEYILP+LVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTS+AAEERLKIFSDDKLEEKKLMLHLLVAL
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKKLMLHLLVAL

A0A1S4E4A6 LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A1.3e-1659.49Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRF--YENLRCSKEGLTSKAAEERLKIFS
        MQSETN  TAYPEYILP+LVHALAHHSCPDVDECKDV+AYELVYR+++ +     +++     E  ++K  E    IFS
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRF--YENLRCSKEGLTSKAAEERLKIFS

A0A5D3E6K9 Sister chromatid cohesion protein PDS5-like protein A1.3e-1659.49Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRF--YENLRCSKEGLTSKAAEERLKIFS
        MQSETN  TAYPEYILP+LVHALAHHSCPDVDECKDV+AYELVYR+++ +     +++     E  ++K  E    IFS
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRF--YENLRCSKEGLTSKAAEERLKIFS

A0A6J1HQY6 sister chromatid cohesion protein PDS5 homolog A-like isoform X21.1e-1581.25Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSE N  TAYPEYI+P+LVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY

A0A6J1HT95 sister chromatid cohesion protein PDS5 homolog A-like isoform X11.1e-1581.25Show/hide
Query:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSE N  TAYPEYI+P+LVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIY

SwissProt top hitse value%identityAlignment
P22180 Plasma membrane ATPase 11.5e-0650.94Show/hide
Query:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK
        E  D    E V  +  P++  +ENLRC++EGLT+ AA+ERL IF  +KLEEKK
Subjt:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK

Q08435 Plasma membrane ATPase 18.7e-0752.83Show/hide
Query:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK
        E  D    E V  +  P++  +ENLRC+KEGLT+ AA+ERL IF  +KLEEKK
Subjt:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK

Q08436 Plasma membrane ATPase 36.7e-0752.83Show/hide
Query:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK
        E  D    E V  +  P++  +ENLRC+KEGLT+ AA+ERL IF  +KLEEKK
Subjt:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK

Q9LV11 ATPase 11, plasma membrane-type8.7e-0746.43Show/hide
Query:  DVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK
        D +E  +    E V  +  P++  +E+LRCS+EGLT++AA+ERL +F  +KLEEKK
Subjt:  DVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK

Q9SU58 ATPase 4, plasma membrane-type6.7e-0764.86Show/hide
Query:  PLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK
        P++  +ENLRCSKEGLT++AA+ERL +F  +KLEEKK
Subjt:  PLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK

Arabidopsis top hitse value%identityAlignment
AT3G47950.1 H(+)-ATPase 44.8e-0864.86Show/hide
Query:  PLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK
        P++  +ENLRCSKEGLT++AA+ERL +F  +KLEEKK
Subjt:  PLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK

AT5G47690.1 binding6.2e-1650.7Show/hide
Query:  QSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEER
        Q++ NS T YP +ILP+LVHALAHHSCPDV++CKDV+ YE++YR++Y +      L   ++G T    +ER
Subjt:  QSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEER

AT5G47690.2 binding6.2e-1650.7Show/hide
Query:  QSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEER
        Q++ NS T YP +ILP+LVHALAHHSCPDV++CKDV+ YE++YR++Y +      L   ++G T    +ER
Subjt:  QSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEER

AT5G47690.3 binding6.2e-1650.7Show/hide
Query:  QSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEER
        Q++ NS T YP +ILP+LVHALAHHSCPDV++CKDV+ YE++YR++Y +      L   ++G T    +ER
Subjt:  QSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEER

AT5G62670.1 H(+)-ATPase 116.2e-0846.43Show/hide
Query:  DVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK
        D +E  +    E V  +  P++  +E+LRCS+EGLT++AA+ERL +F  +KLEEKK
Subjt:  DVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATTCTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGT
CCAGGCATATGAACTAGTATATAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTAAGGCTGCTGAGGAAAGGCTGA
AGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATTCTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGT
CCAGGCATATGAACTAGTATATAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTAAGGCTGCTGAGGAAAGGCTGA
AGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGTGA
Protein sequenceShow/hide protein sequence
MQSETNSATAYPEYILPFLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSKAAEERLKIFSDDKLEEKKLMLHLLVAL