CuGenDBv2

Gene ID	CSPI01G13920
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pheophorbide a oxygenase family protein with Rieske domain
Genome location	Chr1:9521569..9524095
RNA-Seq Expression	CSPI01G13920
Synteny	CSPI01G13920
Gene Ontology terms	GO:0005737 - cytoplasm (cellular component) GO:0010277 - chlorophyllide a oxygenase [overall] activity (molecular function) GO:0032441 - pheophorbide a oxygenase activity (molecular function)
InterPro domains	IPR013626 - Pheophorbide a oxygenase

Homology

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GenBank top hits

e value

%identity

Alignment

KGN64853.1 hypothetical protein Csa_022799 [Cucumis sativus]

9.6e-67

77.46

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Query:  MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWLLEKLV-----RNFFQFSMPGPAWWQVVPRWHGHWTSNKVY
        MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQW+LEKLV     RNFFQFSMPGPAWWQVVPRWH HWTSNKVY
Subjt:  MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWLLEKLV-----RNFFQFSMPGPAWWQVVPRWHGHWTSNKVY

Query:  DGDMIVLQGSGEDIFID---ERHHGKGQPKWFKA-CSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF
        DGDMIVLQGSGEDIFID   E+ +  G      + C QQ  P            TIVWIV IKLNAKGTNTLF
Subjt:  DGDMIVLQGSGEDIFID---ERHHGKGQPKWFKA-CSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF

XP_015868436.1 pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba]

3.3e-35

42.61

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R++  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQF+MPGPAWWQ+VPRWH HWTSNKVYDGDMIVLQG  E IF+ E                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL
        R HG  QP+WF   SQQPLPSTVLSKRQ+L
Subjt:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL

XP_015873629.1 pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba]

3.3e-35

42.61

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R++  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQF+MPGPAWWQ+VPRWH HWTSNKVYDGDMIVLQG  E IF+ E                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL
        R HG  QP+WF   SQQPLPSTVLSKRQ+L
Subjt:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL

XP_022152935.1 pheophorbide a oxygenase, chloroplastic [Momordica charantia]

1.0e-36

44.35

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R++  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQG  E IF+ +                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL
        R HGKGQP+WF A SQQPLPSTVLSKRQ+L
Subjt:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL

XP_024156933.1 pheophorbide a oxygenase, chloroplastic [Rosa chinensis]

7.4e-35

41.74

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W          R+T  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQFSMPGPAWWQV+PRWH HWTSNKVYDGDMIVLQG  E IF+ +                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL
        R HG  QP+WF    QQPLPST+LSKRQ+L
Subjt:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LST3 PaO domain-containing protein

4.7e-67

77.46

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Query:  MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWLLEKLV-----RNFFQFSMPGPAWWQVVPRWHGHWTSNKVY
        MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQW+LEKLV     RNFFQFSMPGPAWWQVVPRWH HWTSNKVY
Subjt:  MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWLLEKLV-----RNFFQFSMPGPAWWQVVPRWHGHWTSNKVY

Query:  DGDMIVLQGSGEDIFID---ERHHGKGQPKWFKA-CSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF
        DGDMIVLQGSGEDIFID   E+ +  G      + C QQ  P            TIVWIV IKLNAKGTNTLF
Subjt:  DGDMIVLQGSGEDIFID---ERHHGKGQPKWFKA-CSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF

A0A2P6QGN9 Putative pheophorbide a oxygenase

3.6e-35

41.74

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W          R+T  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQFSMPGPAWWQV+PRWH HWTSNKVYDGDMIVLQG  E IF+ +                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL
        R HG  QP+WF    QQPLPST+LSKRQ+L
Subjt:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL

A0A6J1DFC6 pheophorbide a oxygenase, chloroplastic

5.0e-37

44.35

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R++  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQG  E IF+ +                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL
        R HGKGQP+WF A SQQPLPSTVLSKRQ+L
Subjt:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL

A0A6P3Z2T8 pheophorbide a oxygenase, chloroplastic-like

1.6e-35

42.61

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R++  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQF+MPGPAWWQ+VPRWH HWTSNKVYDGDMIVLQG  E IF+ E                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL
        R HG  QP+WF   SQQPLPSTVLSKRQ+L
Subjt:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL

A0A6P3Z915 pheophorbide a oxygenase, chloroplastic-like

1.6e-35

42.61

Show/hide

Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R++  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQF+MPGPAWWQ+VPRWH HWTSNKVYDGDMIVLQG  E IF+ E                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL
        R HG  QP+WF   SQQPLPSTVLSKRQ+L
Subjt:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL

SwissProt top hits

e value

%identity

Alignment

Q0DV66 Pheophorbide a oxygenase, chloroplastic

9.8e-30

37.83

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        P FS+V I+ DL+YG DTLMENVSDPSHI+ AHH+                    W          R++ +F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQFSMPG AWWQ+VPRW+ HWTSN VYDGDMIVLQG  E IF+                                   
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL
        R  G  QP WF   SQ+ LPSTVLSKR++L
Subjt:  RHHGKGQPKWFKACSQQPLPSTVLSKRQIL

Q9FYC2 Pheophorbide a oxygenase, chloroplastic

3.8e-34

40.52

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W          R+T  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQFS+PGPAWWQVVPRW+ HWTSN VYDGDMIVLQG  E +F+ +                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  -RHHGKGQPKWFKAC-SQQPLPSTVLSKRQIL
         R HGK QP+WF +  S QPLPSTVL+KRQ+L
Subjt:  -RHHGKGQPKWFKAC-SQQPLPSTVLSKRQIL

Arabidopsis top hits

e value

%identity

Alignment

AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain

2.7e-35

40.52

Show/hide

Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI
        PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W          R+T  F+                        + I
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-----------------------YLAI

Query:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------
          F   M       +V   RNFFQFS+PGPAWWQVVPRW+ HWTSN VYDGDMIVLQG  E +F+ +                                 
Subjt:  NGFAPSMCQWLLEKLV---RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE---------------------------------

Query:  -RHHGKGQPKWFKAC-SQQPLPSTVLSKRQIL
         R HGK QP+WF +  S QPLPSTVL+KRQ+L
Subjt:  -RHHGKGQPKWFKAC-SQQPLPSTVLSKRQIL

Sequences

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CDS sequence

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ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGA
GTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGCTCCTGGAAAAACTCGTTCGAAACTTCTTCCAGTTTTCAATGC
CCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGGGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTT
ATCGATGAAAGGCATCACGGAAAAGGCCAACCTAAATGGTTTAAGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCTAAACGTCAGATATTGAAAACTACCAT
CGTCTGGATTGTTTTTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

mRNA sequence

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Protein sequence

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MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWLLEKLVRNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIF
IDERHHGKGQPKWFKACSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF

CSPI01G13920 (gene) of Cucumber (PI 183967) v1 genome