CuGenDBv2

Gene ID	CSPI01G14090
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	recQ-mediated genome instability protein 2
Genome location	Chr1:9666775..9669641
RNA-Seq Expression	CSPI01G14090
Synteny	CSPI01G14090
Gene Ontology terms	GO:0006629 - lipid metabolic process (biological process) GO:0009555 - pollen development (biological process) GO:0033045 - regulation of sister chromatid segregation (biological process) GO:0043007 - maintenance of rDNA (biological process) GO:2000042 - negative regulation of double-strand break repair via homologous recombination (biological process) GO:0005829 - cytosol (cellular component) GO:0016607 - nuclear speck (cellular component) GO:0008374 - O-acyltransferase activity (molecular function)
InterPro domains	IPR032245 - RecQ-mediated genome instability protein 2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004139456.1 recQ-mediated genome instability protein 2 isoform X2 [Cucumis sativus]

6.2e-66

82.32

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSL                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
              GMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL

XP_008462275.1 PREDICTED: recQ-mediated genome instability protein 2 [Cucumis melo]

5.7e-59

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDYSL ALKLLCRQLKDARGTPSH TA L GILFQRAWLQGILVSVDKENGKLILDD TGTVELSL R+FLLRPWSL                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
              GMYVMVVGAFLFRTNE PFI VHKI+DLSKSPNREAMWYLEVMEAYK+FYEPLVE+FL
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL

XP_022152884.1 recQ-mediated genome instability protein 2 isoform X1 [Momordica charantia]

1.5e-48

64.02

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDYSL ALK+LC QL  AR TPS   A LGGILFQRAWLQGILVSVDK N +L+LDD TGTVELSLSRDF LRPW+L                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
              GMYVMVVGAF+ R NE P I VHKI+DLS+ P+REAMWYLEVMEAYK+FYEPL+E+FL
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL

XP_031736186.1 recQ-mediated genome instability protein 2 isoform X1 [Cucumis sativus]

2.2e-87

99.39

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
        F CFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL

XP_038894076.1 uncharacterized protein LOC120082820 [Benincasa hispida]

1.9e-51

67.48

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDYSL ALKLLCRQLKDAR +P++  A LGGILFQRAWLQG LVSVDKEN KLILDD TGTVELSLSRDF LRPW L                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDF
              GMYVMVVGAF+FRTNE P I VHKI+DLSK P+REAMWYLEV+EAYK+FYEPL+E+F
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVL5 Uncharacterized protein

3.0e-66

82.32

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSL                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
              GMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL

A0A1S3CGI5 recQ-mediated genome instability protein 2

2.7e-59

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDYSL ALKLLCRQLKDARGTPSH TA L GILFQRAWLQGILVSVDKENGKLILDD TGTVELSL R+FLLRPWSL                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
              GMYVMVVGAFLFRTNE PFI VHKI+DLSKSPNREAMWYLEVMEAYK+FYEPLVE+FL
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL

A0A5A7UD07 RecQ-mediated genome instability protein 2

2.7e-59

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDYSL ALKLLCRQLKDARGTPSH TA L GILFQRAWLQGILVSVDKENGKLILDD TGTVELSL R+FLLRPWSL                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
              GMYVMVVGAFLFRTNE PFI VHKI+DLSKSPNREAMWYLEVMEAYK+FYEPLVE+FL
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL

A0A6J1DF83 recQ-mediated genome instability protein 2 isoform X1

7.5e-49

64.02

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDYSL ALK+LC QL  AR TPS   A LGGILFQRAWLQGILVSVDK N +L+LDD TGTVELSLSRDF LRPW+L                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL
              GMYVMVVGAF+ R NE P I VHKI+DLS+ P+REAMWYLEVMEAYK+FYEPL+E+FL
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL

A0A6J1I0C8 uncharacterized protein LOC111469342

7.5e-49

65.03

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF
        MDY+L ALKLLCRQL DAR  PS+  A LGGILFQRAWLQGILV VD++NGKLILDD TGTVELSLS DF  RPWSL                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAF

Query:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDF
              GMYVMVVGA++ RTNE   I VHKI+DLSK P REAMWYLEVMEAYK+FYEPLVE+F
Subjt:  FVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDF

SwissProt top hits

e value

%identity

Alignment

Q96E14 RecQ-mediated genome instability protein 2

8.3e-05

30.92

Show/hide

Query:  LKLLCRQL-KDARGTP-----SHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAFF
        LK+L  QL +DA G P     S   A  G +     W+QG +V  D+  G+  L D +G        DF +R   L   P   P                
Subjt:  LKLLCRQL-KDARGTP-----SHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAFF

Query:  VCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYK
         C   G YVMV+G     + E P +   K+ DLS +P  E+MW LEV + ++
Subjt:  VCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYK

Arabidopsis top hits

e value

%identity

Alignment

AT1G08390.1 unknown protein

1.3e-42

51.52

Show/hide

Query:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGK--LILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSL
        MDYSL A+K+LC QL+DA+ TPS   A+LGG+LFQRAWLQG+LV      G   L+LDD TG +EL L+ DF LR W                       
Subjt:  MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGK--LILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSL

Query:  AFFVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDF
               SGMYVMVVG +  RT ++P + VHK++DLS SP+REAMWYLEVM+AY+LFYEPL+++F
Subjt:  AFFVCFCSGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACTACAGCTTAGGAGCCTTGAAGCTTCTATGCCGGCAGCTCAAAGACGCCCGCGGAACTCCGTCCCACCCCACCGCCAATCTTGGCGGCATTCTCTTCCAACGCGC
CTGGCTTCAGGGGATTTTGGTCTCCGTCGACAAGGAAAATGGTAAATTGATTCTCGATGACGCCACCGGCACCGTCGAGCTCTCCCTCTCTCGCGACTTCCTTCTCCGCC
CTTGGAGTCTCGGTATTTTCCCTACTACTTCCCCGTTCTCTTTTTTGCTGCTGCATTTTGAGTTGGATTCTCTCGCTTTCTTTGTTTGTTTTTGTTCAGGGATGTATGTG
ATGGTTGTTGGCGCTTTTCTCTTTCGGACGAATGAACTGCCCTTTATTGTGGTCCACAAGATTATTGATCTTTCAAAGTCTCCTAATCGTGAGGCAATGTGGTACCTTGA
AGTCATGGAAGCATACAAATTGTTCTATGAACCTCTTGTCGAAGACTTTTTGTAA

mRNA sequence

Show/hide mRNA sequence

AGAGCAATTTTGGAAGAAGACGGACATGGACTACAGCTTAGGAGCCTTGAAGCTTCTATGCCGGCAGCTCAAAGACGCCCGCGGAACTCCGTCCCACCCCACCGCCAATC
TTGGCGGCATTCTCTTCCAACGCGCCTGGCTTCAGGGGATTTTGGTCTCCGTCGACAAGGAAAATGGTAAATTGATTCTCGATGACGCCACCGGCACCGTCGAGCTCTCC
CTCTCTCGCGACTTCCTTCTCCGCCCTTGGAGTCTCGGTATTTTCCCTACTACTTCCCCGTTCTCTTTTTTGCTGCTGCATTTTGAGTTGGATTCTCTCGCTTTCTTTGT
TTGTTTTTGTTCAGGGATGTATGTGATGGTTGTTGGCGCTTTTCTCTTTCGGACGAATGAACTGCCCTTTATTGTGGTCCACAAGATTATTGATCTTTCAAAGTCTCCTA
ATCGTGAGGCAATGTGGTACCTTGAAGTCATGGAAGCATACAAATTGTTCTATGAACCTCTTGTCGAAGACTTTTTGTAACTTGTTTTGTCGACCTAAAAGGACATATAT
ACCTTCAATGCGGAGATGGATATGGAGAAATCCTTGGATTGGACCAAAAATGTAGAAATTCTTGGTGGGAAAATTTGGTACAAATGCACACATCACAAAACTTGTAAAGA
TTTTCAGATTGTAGATGTTATTTCATTCAAAAGGGGATGTTGTTTGCATGCCAAACACTTCTCTCTTTGGGAGCCTATAATTCATGGTATTCCTGTGGAGGCCTTACCAG
GTATTGTGGTAGGGATAAAACCGTAGATGTCATATGATCGATATCGAACTCTTTGATGTACAAATATATAGACATATTGGTGGATACTTTCATCTTTGCTTTATTCGAAG
ATGTATTTTATTAGCCAAATAACAAAGGGCTCGATTCAAAACATTGAAGTATACCATCCTTTACCTATCCCTTATTAATA

Protein sequence

Show/hide protein sequence

MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATGTVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAFFVCFCSGMYV
MVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL

CSPI01G14090 (gene) of Cucumber (PI 183967) v1 genome