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CSPI01G14440 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G14440
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRAB6-interacting golgin
Genome locationChr1:10095764..10098040
RNA-Seq ExpressionCSPI01G14440
SyntenyCSPI01G14440
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]3.0e-8299.43Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]4.0e-7997.71Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNG IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]5.8e-7088.83Show/hide
Query:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDP
        MTTQKQSWEAQ    QMQRV+NSGMI S+VN   IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVE RLGRAEEATKRLAEIREELE M DP
Subjt:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDP

Query:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

XP_022970344.1 uncharacterized protein LOC111469338 [Cucurbita maxima]1.5e-6584.83Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEAQQ    QRVK +           IGSP +EDQEEE+SRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPM
Subjt:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        RKEVS IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKNKEKSQLV+KLMELVNESEKLRMKKLEELS NIDIL
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]1.5e-7393.3Show/hide
Query:  MTTQKQSWEA---QQMQRVKNSG-MISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDP
        MTT KQSWEA   QQMQRVKNSG MISSNVN   IGSP+KEDQEEEISRSALA+FRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDP
Subjt:  MTTQKQSWEA---QQMQRVKNSG-MISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDP

Query:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin1.4e-8299.43Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR

A0A1S3CFV6 RAB6-interacting golgin2.0e-7997.71Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNG IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

A0A5D3CH78 RAB6-interacting golgin2.0e-7997.71Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNG IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

A0A6J1CNF1 RAB6-interacting golgin2.8e-7088.83Show/hide
Query:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDP
        MTTQKQSWEAQ    QMQRV+NSGMI S+VN   IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVE RLGRAEEATKRLAEIREELE M DP
Subjt:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDP

Query:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

A0A6J1I589 RAB6-interacting golgin7.2e-6684.83Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEAQQ    QRVK +           IGSP +EDQEEE+SRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPM
Subjt:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        RKEVS IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKNKEKSQLV+KLMELVNESEKLRMKKLEELS NIDIL
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)1.9e-5062.71Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPM
        M T +Q  E  Q   +QR+K+SG IS N      GSP+ +++EEE+S+SA ALF+AKE+EIER+KME++++V+ +LG AEEAT+RLAEIREELE +TDPM
Subjt:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDI
        RKE+S IRK++D +N+ELKPLG +CQ+KERE+KE L+ +NEKNKEK+  VSKL+ELV ESEKLRM KLEELSK+I+I
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDI

AT2G36410.2 Family of unknown function (DUF662)9.1e-4561.18Show/hide
Query:  QKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKEVSF
        Q QS    Q Q+  N  ++ +     +  S     ++EE++RSAL+ FRAKE+EIE+++ME+RE+++ +LGR E+ TKRL+ IREELE M DPMRKEVS 
Subjt:  QKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKEVSF

Query:  IRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID
        +RKKID VNKELKPLG T QKKEREYKE LD FNEKN+EK QL++KLMELV ESEKLRM KLEELSK+I+
Subjt:  IRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID

AT3G09980.1 Family of unknown function (DUF662)5.1e-4866.67Show/hide
Query:  NSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP
        +S  + + ++  +  S     ++EE+SR+AL+ FRAKEEEIE+KKME+RE+V+ +LGR EE TKRLA IREELEG+ DPMRKEV+ +RKKID VNKELKP
Subjt:  NSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP

Query:  LGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID
        LG T QKKEREYKE L+ FNEKN+EK QL+++LMELV ESEK+RMKKLEELSKNID
Subjt:  LGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID

AT3G52920.1 Family of unknown function (DUF662)1.2e-4471.01Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE++RSAL+ FRAKE+EIE++KME+RE+V+ +LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPLG T QKKEREYKE LD FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNKEKSQLVSKLME---LVNESEKLRMKKLEELSKNID
        KN+EK QL++KLME   LV ESEKLR+KKL+ELS++ID
Subjt:  KNKEKSQLVSKLME---LVNESEKLRMKKLEELSKNID

AT3G52920.2 Family of unknown function (DUF662)2.8e-4672.59Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE++RSAL+ FRAKE+EIE++KME+RE+V+ +LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPLG T QKKEREYKE LD FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID
        KN+EK QL++KLMELV ESEKLR+KKL+ELS++ID
Subjt:  KNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATAATTGGGAGTCCGTTGAAGGA
GGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTGGAAACTCGCCTTG
GACGAGCTGAAGAAGCAACGAAGCGATTGGCGGAGATTCGGGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTG
GTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTGGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATTGGT
ATCCAAACTCATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTTCGTTAA
mRNA sequenceShow/hide mRNA sequence
GGGTTAAGGTTTGGCCACCTAACAGAGAAAGAAAATCATCATCATCATTTGCGAGAGAGAGATTGAGGATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAG
AGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATAATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTT
TAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTGGAAACTCGCCTTGGACGAGCTGAAGAAGCAACGAAGCGATTGGCGGAGATTCGGG
AAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAG
AAGGAGAGAGAATACAAAGAAGTGTTGGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATTGGTATCCAAACTCATGGAGTTGGTGAATGAGAGCGAAAAATTGAG
GATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTTCGTTAAGAAAAAGTGTTCTTCTAAGTTCTAACCCAAATTAATCACCAACAACCACTTTGTTTGTATT
TCCACATTTTGTTTCTCCTTAACTCTCATTACATATCTTTTTTTCTTGAAGTTTCCCATCAGAAAAAAAAAAAGAGAGGAGGGAGAAAAAAAAAAGGAAATTTAACTTTG
CCAACAAATGGGAATGACATTAATTTGCTTGTATTAATAAGTTTCACAACCACGAGTGCTGTGTTGATAGTGTGATGCATGTTTGACAATAATATTTTTCCATTTCTTTA
CT
Protein sequenceShow/hide protein sequence
MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVETRLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDL
VNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR