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CSPI01G14870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G14870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationChr1:10536656..10537171
RNA-Seq ExpressionCSPI01G14870
SyntenyCSPI01G14870
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009610 - response to symbiotic fungus (biological process)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066044.1 uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa]1.3e-2148.44Show/hide
Query:  ESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEG
        ++ D  E VA GDHN  +   P +   DP+  Q  P    +      K  +    +TTK GR+K+ LNIPSVPI+GISFH E+N +RWK+VVQ+RIA E 
Subjt:  ESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEG

Query:  NVSDKYQSCVSVMDHISQAGLSRTILNV
        N+SDK+ SCVS+M+ I +AGLS+TI +V
Subjt:  NVSDKYQSCVSVMDHISQAGLSRTILNV

KAE8652851.1 hypothetical protein Csa_022694 [Cucumis sativus]9.7e-7094.59Show/hide
Query:  SLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFH
        SL HHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAP SS INDPNLSQPNPEDLVQASKLNVKSSKGL VVTTKTG QKL LNIPSVPIDGISFH
Subjt:  SLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFH

Query:  HEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV
        HEKN QRWKYVVQQRIAYEGNVS+KYQSCVSVMDHISQAGLSRTILNV
Subjt:  HEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV

KGN64982.2 hypothetical protein Csa_022750 [Cucumis sativus]3.7e-7795.06Show/hide
Query:  MSKEKGHAPMNTRSSSFESSSIGSLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVT
        MSKEKGHAPMNTRSSSFESSSIGSL HHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAP SS INDPNLSQPNPEDLVQASKLNVKSSKGL VVT
Subjt:  MSKEKGHAPMNTRSSSFESSSIGSLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVT

Query:  TKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQA
        TKTG QKL LNIPSVPIDGISFHHEKN QRWKYVVQQRIAYEGNVS+KYQSCVSVMDHISQA
Subjt:  TKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQA

TYJ96199.1 uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa]2.2e-2147.66Show/hide
Query:  ESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEG
        ++ D  E V   DHN  +   P +   DP+  Q  P    +      K  +    +TTK GR+K+ LNIPSVPI GISFHHE+N QRWK+VVQ+RIA E 
Subjt:  ESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEG

Query:  NVSDKYQSCVSVMDHISQAGLSRTILNV
        N+S+K+ SCVS+++ I +AGLS+TI NV
Subjt:  NVSDKYQSCVSVMDHISQAGLSRTILNV

XP_008464590.1 PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo]4.9e-2143.62Show/hide
Query:  GSLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISF
        GSL+    +  +   S+    ++ D  E V   DHN  +   P +   DP+  Q  P    +      K  +    +TTK GR+K+ LNIPSVPI GISF
Subjt:  GSLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISF

Query:  HHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV
        HHE+N QRWK+VVQ+RIA E N+S+K+ SCVS+++ I +AGLS+TI NV
Subjt:  HHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV

TrEMBL top hitse value%identityAlignment
A0A1S3CND8 uncharacterized protein LOC1035024362.4e-2143.62Show/hide
Query:  GSLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISF
        GSL+    +  +   S+    ++ D  E V   DHN  +   P +   DP+  Q  P    +      K  +    +TTK GR+K+ LNIPSVPI GISF
Subjt:  GSLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISF

Query:  HHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV
        HHE+N QRWK+VVQ+RIA E N+S+K+ SCVS+++ I +AGLS+TI NV
Subjt:  HHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV

A0A5A7SZY3 Reverse transcriptase Ty1/copia-type domain-containing protein4.0e-2154.29Show/hide
Query:  INDPNL--SQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSR
        I+DP    ++  PE    +     K+ +    +TTKTGR+K+ +NIPSVPIDGISFHHE+N QRWK+VVQ+RIA E N+S K+QSC+S+MD I +AGL +
Subjt:  INDPNL--SQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSR

Query:  TILNV
        TI NV
Subjt:  TILNV

A0A5A7VFF7 Uncharacterized protein6.2e-2248.44Show/hide
Query:  ESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEG
        ++ D  E VA GDHN  +   P +   DP+  Q  P    +      K  +    +TTK GR+K+ LNIPSVPI+GISFH E+N +RWK+VVQ+RIA E 
Subjt:  ESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEG

Query:  NVSDKYQSCVSVMDHISQAGLSRTILNV
        N+SDK+ SCVS+M+ I +AGLS+TI +V
Subjt:  NVSDKYQSCVSVMDHISQAGLSRTILNV

A0A5D3BB19 Uncharacterized protein1.1e-2147.66Show/hide
Query:  ESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEG
        ++ D  E V   DHN  +   P +   DP+  Q  P    +      K  +    +TTK GR+K+ LNIPSVPI GISFHHE+N QRWK+VVQ+RIA E 
Subjt:  ESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEG

Query:  NVSDKYQSCVSVMDHISQAGLSRTILNV
        N+S+K+ SCVS+++ I +AGLS+TI NV
Subjt:  NVSDKYQSCVSVMDHISQAGLSRTILNV

A0A5D3DU39 Cell wall protein RBR3-like1.5e-2046.81Show/hide
Query:  SDHLLPESEDIPETVASGDHNVSIRAP-----PSSSINDP--NLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQR
        S H+ PES    E   S +H++ ++ P      S  I DP  ++ +  P+      K + K+S    V+TTKTG +K+  NIPS+PIDGISFH E++  R
Subjt:  SDHLLPESEDIPETVASGDHNVSIRAP-----PSSSINDP--NLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQR

Query:  WKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV
        WKYVVQ+R A E N+SDK+ SC+SVMD   QAGLS+TI NV
Subjt:  WKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACAACATCACAATTCTGATGACTCTGTATTTAATCC
ATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTTCTATAAATGACCCAAACC
TATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACTTAATGTCAAGTCTTCCAAGGGCCTTCATGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCTCCTC
AACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGA
CAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGGTTTGTCAAGAACTATTCTAAATGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACAACATCACAATTCTGATGACTCTGTATTTAATCC
ATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTTCTATAAATGACCCAAACC
TATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACTTAATGTCAAGTCTTCCAAGGGCCTTCATGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCTCCTC
AACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGA
CAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGGTTTGTCAAGAACTATTCTAAATGTGTGA
Protein sequenceShow/hide protein sequence
MSKEKGHAPMNTRSSSFESSSIGSLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLL
NIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV