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CSPI01G14960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G14960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCASP-like protein
Genome locationChr1:10597353..10597788
RNA-Seq ExpressionCSPI01G14960
SyntenyCSPI01G14960
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652815.1 hypothetical protein Csa_023994, partial [Cucumis sativus]2.3e-23100Show/hide
Query:  LDLWKRFSDHFRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPMPTAFLTL
        LDLWKRFSDHFRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPMPTAFLTL
Subjt:  LDLWKRFSDHFRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPMPTAFLTL

KAF5470938.1 hypothetical protein F2P56_011422, partial [Juglans regia]9.0e-0448.28Show/hide
Query:  FLFVSPRFAFLDLWKRFSDH-FRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPM
        FLF+S   +     +R +   FR+SF +E+ + LGW   FS+G+GVT PKARTRDKP+
Subjt:  FLFVSPRFAFLDLWKRFSDH-FRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPM

KAG6583714.1 hypothetical protein SDJN03_19646, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1682.76Show/hide
Query:  FAFLDLWKRFSDHFRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPM-PTAFLTL
        F+ LDLW R SDHFRKSFCKE Q+ELGW NIF RGLGVTAPKARTRDKPM  TAFLTL
Subjt:  FAFLDLWKRFSDHFRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPM-PTAFLTL

KAG7019361.1 hypothetical protein SDJN02_18321 [Cucurbita argyrosperma subsp. argyrosperma]6.0e-1685.45Show/hide
Query:  LDLWKRFSDHFRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPM-PTAFLTL
        LDLW R SDHFRKSFCKE Q+ELGW NIF RGLGVTAPKARTRDKPM  TAFLTL
Subjt:  LDLWKRFSDHFRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPM-PTAFLTL

TKR98526.1 Casparian strip membrane protein [Populus alba]5.3e-0466.67Show/hide
Query:  FRKSF-CKEQQ-RELGWNNIFSRGLGVTAPKARTRDKPM
        FRKSF C  ++   LGW N FS G+G+TAPKARTRDKPM
Subjt:  FRKSF-CKEQQ-RELGWNNIFSRGLGVTAPKARTRDKPM

TrEMBL top hitse value%identityAlignment
A0A4U5PQ38 CASP-like protein2.5e-0466.67Show/hide
Query:  FRKSF-CKEQQ-RELGWNNIFSRGLGVTAPKARTRDKPM
        FRKSF C  ++   LGW N FS G+G+TAPKARTRDKPM
Subjt:  FRKSF-CKEQQ-RELGWNNIFSRGLGVTAPKARTRDKPM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCATCTTCATTCTGTTGATCGGATCTTTTCTTTTCGTTTCTCCCCGTTTTGCCTTCTTGGACTTGTGGAAGCGCTTCTCTGATCATTTCCGGAAATCGTTTTG
CAAGGAGCAGCAGAGGGAGCTGGGCTGGAACAATATTTTTAGCCGAGGTTTGGGTGTCACTGCTCCCAAGGCAAGAACTCGTGACAAACCCATGCCTACTGCCTTCTTGA
CTCTC
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCATCTTCATTCTGTTGATCGGATCTTTTCTTTTCGTTTCTCCCCGTTTTGCCTTCTTGGACTTGTGGAAGCGCTTCTCTGATCATTTCCGGAAATCGTTTTG
CAAGGAGCAGCAGAGGGAGCTGGGCTGGAACAATATTTTTAGCCGAGGTTTGGGTGTCACTGCTCCCAAGGCAAGAACTCGTGACAAACCCATGCCTACTGCCTTCTTGA
CTCTC
Protein sequenceShow/hide protein sequence
MDSIFILLIGSFLFVSPRFAFLDLWKRFSDHFRKSFCKEQQRELGWNNIFSRGLGVTAPKARTRDKPMPTAFLTL