; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G15070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G15070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationChr1:10682257..10683732
RNA-Seq ExpressionCSPI01G15070
SyntenyCSPI01G15070
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139505.1 LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus]3.1e-15898.56Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGD
        MLIHDLN NHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQ  PKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGD
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGD

Query:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFF
        TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLP DLEQFLGVVRLFF
Subjt:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFF

Query:  GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
Subjt:  GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

XP_008463638.1 PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis melo]1.3e-14891.46Show/hide
Query:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL
        MLIHDLNINH+S    IQIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQ KPK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV
        GTGDTRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLP  LE+FLGVV
Subjt:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV

Query:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        R+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Subjt:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]1.3e-12981.95Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG
        M++ DL  N K IQIREVWASNLESEF LIRDLIDQFPCVSMDTEFPGV+F   AKP    N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGTG
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG

Query:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF
         +RFIWEFNF DFDVARD+HAP+SIELLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT + LP+ LE+FLGV+R+F
Subjt:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF

Query:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDRIAK +NV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  + KHAGVLYGLEV
Subjt:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]6.3e-12779.64Show/hide
Query:  MLIHDLNINH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSP--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLG
        M+ HDLN NH KSI+IREVWASNLESEF+LIRDLID FPCVSMDTEFPG++F     P +      S HY+ LKSNVD L+LIQIGITLSDSDGNLPDLG
Subjt:  MLIHDLNINH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSP--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLG

Query:  TGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVR
        T D+RFIWEFNF DFD+ARD++AP+SI+LLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILT + LPN L++FLGV+R
Subjt:  TGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVR

Query:  LFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        + FGDNVYD+KY+MRFC+SLYGGLDRIAK++NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLE F
Subjt:  LFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]4.3e-13684.89Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG
        M+IHDLNIN+KSI+IREVWASNLESEF+LIRDLIDQFPCVSMDTEFPG++F   A+P    + PS HY+ LKSNVD LHLIQIGITLSDSDGNLPDLGT 
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG

Query:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF
        DTRFIWEFNF DFDVARDLHAP+SIELLRRQGIDF+RNR EGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT ++LP+ +++FLGV+R+F
Subjt:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF

Query:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        FGDNVYDMKYLMRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ EM KHAGVLYGLEVF
Subjt:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease1.5e-15898.56Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGD
        MLIHDLN NHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQ  PKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGD
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGD

Query:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFF
        TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLP DLEQFLGVVRLFF
Subjt:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFF

Query:  GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
Subjt:  GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

A0A1S3CJQ2 Poly(A)-specific ribonuclease6.3e-14991.46Show/hide
Query:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL
        MLIHDLNINH+S    IQIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQ KPK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV
        GTGDTRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLP  LE+FLGVV
Subjt:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV

Query:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        R+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Subjt:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

A0A5A7T1W0 Poly(A)-specific ribonuclease6.3e-14991.46Show/hide
Query:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL
        MLIHDLNINH+S    IQIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQ KPK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV
        GTGDTRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLP  LE+FLGVV
Subjt:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV

Query:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        R+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Subjt:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

A0A6J1CN71 Poly(A)-specific ribonuclease6.5e-13081.95Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG
        M++ DL  N K IQIREVWASNLESEF LIRDLIDQFPCVSMDTEFPGV+F   AKP    N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGTG
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG

Query:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF
         +RFIWEFNF DFDVARD+HAP+SIELLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT + LP+ LE+FLGV+R+F
Subjt:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF

Query:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDRIAK +NV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  + KHAGVLYGLEV
Subjt:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

A0A6J1G223 Poly(A)-specific ribonuclease3.0e-12779.64Show/hide
Query:  MLIHDLNINH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSP--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLG
        M+ HDLN NH KSI+IREVWASNLESEF+LIRDLID FPCVSMDTEFPG++F     P +      S HY+ LKSNVD L+LIQIGITLSDSDGNLPDLG
Subjt:  MLIHDLNINH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSP--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLG

Query:  TGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVR
        T D+RFIWEFNF DFD+ARD++AP+SI+LLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILT + LPN L++FLGV+R
Subjt:  TGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVR

Query:  LFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        + FGDNVYD+KY+MRFC+SLYGGLDRIAK++NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLE F
Subjt:  LFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 112.0e-10769.29Show/hide
Query:  IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL-GTGDTRFIWEFNFKD
        I IR+VWA NLESEF LIR +++ +P +SMDTEFPGVI+          +P++ Y  LKSNVD L LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF+D
Subjt:  IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL-GTGDTRFIWEFNFKD

Query:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLM
        FDV RD HAP+SIELLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT ++LP  L +FLG++R FFGD VYD+K++M
Subjt:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLM

Query:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        RFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV+    KHAGVLYGLEVF
Subjt:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

Q9LEU4 Probable CCR4-associated factor 1 homolog 103.4e-7553.9Show/hide
Query:  INHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIWEF
        +   SI IREVW  NL  EF LIR+++D+F  ++MDTEFPGV+    A  K  N    +Y+ LK NVDLL LIQ+G+T SD +GNLP  GT D   IW+F
Subjt:  INHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIWEF

Query:  NFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDM
        NF++F++  D++A  SIELLR+ GIDF +N E+GID  RF ELMMSSG+V ND++SWVTFH  YDFGYLVK+LT ++LP     F  ++ ++F   VYD+
Subjt:  NFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDM

Query:  KYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        K+LM FC  L+GGL+R+A+ M V R VG CHQAGSDSLLT  +F+K+++ +F      K+ GVLYGL V
Subjt:  KYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.0e-10366.55Show/hide
Query:  DLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTR-F
        DL  +  ++  REVWA NLESEF LI ++ID +P +SMDTEFPGVIF    +     +P   Y  LK+NVD L LIQ+G+TLSD +GNLPDLG    R F
Subjt:  DLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTR-F

Query:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDN
        IWEFNF+DFDVARD HAP+SIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT ++LP  L +F  V+R+ FG+ 
Subjt:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDN

Query:  VYDMKYLMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        VYD+K++M+FC+  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ    KHAGVLYGLEVF
Subjt:  VYDMKYLMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

Q9SAI2 Probable CCR4-associated factor 1 homolog 67.3e-7853.51Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW
        L +   SIQIREVW  NL+ E  LIRD++D FP V+MDTEFPG++       KS  +  +HY+ LK+NV++L +IQ+G+T S+  GNLP  GT D   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D+ A +SIELL++ GID  +N  +GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+    F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 74.6e-8054.24Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW
        L +   SIQIREVW  NLESE  LIR+++D FP V+MDTEFPG++       K+  +  +HY+ LK+NV++L +IQ+G+T SD  GNLP  GT +   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D++A +SIELLR+ GIDF +N E GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ ++V R VG CHQAGSDSLLT   F+K+++ FF+ + M K++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-7953.51Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW
        L +   SIQIREVW  NL+ E  LIRD++D FP V+MDTEFPG++       KS  +  +HY+ LK+NV++L +IQ+G+T S+  GNLP  GT D   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D+ A +SIELL++ GID  +N  +GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+    F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-7953.51Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW
        L +   SIQIREVW  NL+ E  LIRD++D FP V+MDTEFPG++       KS  +  +HY+ LK+NV++L +IQ+G+T S+  GNLP  GT D   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D+ A +SIELL++ GID  +N  +GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+    F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.2e-8154.24Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW
        L +   SIQIREVW  NLESE  LIR+++D FP V+MDTEFPG++       K+  +  +HY+ LK+NV++L +IQ+G+T SD  GNLP  GT +   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D++A +SIELLR+ GIDF +N E GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ ++V R VG CHQAGSDSLLT   F+K+++ FF+ + M K++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.2e-10566.55Show/hide
Query:  DLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTR-F
        DL  +  ++  REVWA NLESEF LI ++ID +P +SMDTEFPGVIF    +     +P   Y  LK+NVD L LIQ+G+TLSD +GNLPDLG    R F
Subjt:  DLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTR-F

Query:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDN
        IWEFNF+DFDVARD HAP+SIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT ++LP  L +F  V+R+ FG+ 
Subjt:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDN

Query:  VYDMKYLMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        VYD+K++M+FC+  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ    KHAGVLYGLEVF
Subjt:  VYDMKYLMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-10869.29Show/hide
Query:  IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL-GTGDTRFIWEFNFKD
        I IR+VWA NLESEF LIR +++ +P +SMDTEFPGVI+          +P++ Y  LKSNVD L LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF+D
Subjt:  IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL-GTGDTRFIWEFNFKD

Query:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLM
        FDV RD HAP+SIELLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT ++LP  L +FLG++R FFGD VYD+K++M
Subjt:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLM

Query:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        RFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV+    KHAGVLYGLEVF
Subjt:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTATCCACGATCTCAACATCAACCACAAATCCATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGAATCCGAATTTCGTTTGATCCGCGATCTCATCGACCAGTT
CCCTTGCGTTTCAATGGACACGGAGTTCCCCGGAGTCATTTTCCCCCAACAAGCCAAACCCAAATCTCCAAATCACCCCTCCCATCACTACCAATTCCTCAAATCCAACG
TCGACCTCCTCCATCTCATCCAGATCGGAATCACTCTCTCCGATTCTGACGGAAACTTGCCAGATCTCGGCACCGGCGACACCCGATTCATCTGGGAGTTCAACTTTAAG
GACTTTGACGTGGCGCGTGACCTCCACGCTCCGAACTCCATCGAGCTTCTACGCCGTCAGGGCATCGACTTCGACCGGAATCGAGAAGAAGGGATCGATTCCTCCCGCTT
CGCCGAGTTGATGATGTCATCGGGACTCGTCTGTAACGACTCGGTCAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCACCAAA
AACTTCCAAATGATTTAGAACAGTTCCTCGGCGTTGTTAGGCTCTTCTTCGGCGATAACGTGTACGACATGAAGTACTTGATGCGCTTCTGCCAGAGTCTATACGGCGGT
TTGGACCGGATTGCGAAAACTATGAATGTGAACCGGGCGGTTGGAAAGTGCCATCAAGCCGGCTCAGATAGCTTGCTAACGTGGCATGCCTTTCAAAAGATGAGAGATAC
CTTTTTTGTACAGACTGAAATGCACAAACATGCTGGGGTTTTGTACGGATTAGAGGTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
CATCCACTTACTCCGAAATACACGTCACTATTCATTTATAAATATTTTCAATTAAAGAAAAAACGTTTTAGGCAGAACCCAAATTAGACCGAGTCGACTCGCTTACTGTG
TGAGTCAAGGACTAATGAAAAAAACGCGTTGAATCAAATACTCTGAACTTTACTACTCTCTCGATCCTCCCACTTTCCTTTTATATTCCTTTTCCTTTTCCATTCTCTAT
ATTAATCTCTCCTTTCTTCTTCTTTTCCATCCAAATCCCTCACTACTTCAATCCCATCTTATTTTAGTTTTTATTTTATTTATTTTATTTAACTTTTACACCATGCTTAT
CCACGATCTCAACATCAACCACAAATCCATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGAATCCGAATTTCGTTTGATCCGCGATCTCATCGACCAGTTCCCTTGCG
TTTCAATGGACACGGAGTTCCCCGGAGTCATTTTCCCCCAACAAGCCAAACCCAAATCTCCAAATCACCCCTCCCATCACTACCAATTCCTCAAATCCAACGTCGACCTC
CTCCATCTCATCCAGATCGGAATCACTCTCTCCGATTCTGACGGAAACTTGCCAGATCTCGGCACCGGCGACACCCGATTCATCTGGGAGTTCAACTTTAAGGACTTTGA
CGTGGCGCGTGACCTCCACGCTCCGAACTCCATCGAGCTTCTACGCCGTCAGGGCATCGACTTCGACCGGAATCGAGAAGAAGGGATCGATTCCTCCCGCTTCGCCGAGT
TGATGATGTCATCGGGACTCGTCTGTAACGACTCGGTCAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCACCAAAAACTTCCA
AATGATTTAGAACAGTTCCTCGGCGTTGTTAGGCTCTTCTTCGGCGATAACGTGTACGACATGAAGTACTTGATGCGCTTCTGCCAGAGTCTATACGGCGGTTTGGACCG
GATTGCGAAAACTATGAATGTGAACCGGGCGGTTGGAAAGTGCCATCAAGCCGGCTCAGATAGCTTGCTAACGTGGCATGCCTTTCAAAAGATGAGAGATACCTTTTTTG
TACAGACTGAAATGCACAAACATGCTGGGGTTTTGTACGGATTAGAGGTCTTCTAATCTAAATTGTACCTTAAATAAATTTAATTTAAATACTATATACCCATTTATTAT
TAATTACTAATTTCCACTTCTTTTATTTAATTTCTTGAAAGGTAAAGTCTATGGAATGAAGCTATAGATGCAGGTCATTTTGGAGTCAATATTATTCAAAATATAACTAC
ATTACTATAATGTATAATAAGTAAATATTATAGCCTCCGTTTGATAACCCTTATGGCTTCAAGACAATGGTGCATCCAAACACTCATCTTCCTAAATCTCTATCTAAGTT
ACCTATTATGAAATATCTTCCAACATTTTCATCCCTTACAATTAAC
Protein sequenceShow/hide protein sequence
MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFK
DFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLMRFCQSLYGG
LDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF