; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G15300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G15300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSister chromatid cohesion protein PDS5-like protein A
Genome locationChr1:10879085..10882585
RNA-Seq ExpressionCSPI01G15300
SyntenyCSPI01G15300
Gene Ontology termsGO:0007064 - mitotic sister chromatid cohesion (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039776 - Sister chromatid cohesion protein Pds5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK30945.1 sister chromatid cohesion protein PDS5-like protein A [Cucumis melo var. makuwa]1.6e-13390.67Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
        +FYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCS KKPFKITKGKRTPKKNLKHSQNGAS
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS

Query:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEES------------DEEEKPDADDDHKE
        KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQE+SDREIKS+SRGPGAGDHHI+ES            DEEE  DADDD KE
Subjt:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEES------------DEEEKPDADDDHKE

Query:  KPEADDEEEK---DELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
        KPE DDEEEK   D  VEDVESFDQHADN REKTDEDGEADESSSRENIGDDDSDSGKNE TRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
Subjt:  KPEADDEEEK---DELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR

XP_011654767.2 sister chromatid cohesion protein PDS5 homolog A isoform X1 [Cucumis sativus]1.1e-14599.65Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
        +FYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS

Query:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE
        KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE
Subjt:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE

Query:  LVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
        LVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
Subjt:  LVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR

XP_011654769.2 sister chromatid cohesion protein PDS5 homolog A isoform X2 [Cucumis sativus]1.1e-14599.65Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
        +FYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS

Query:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE
        KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE
Subjt:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE

Query:  LVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
        LVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
Subjt:  LVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR

XP_016903052.1 PREDICTED: LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A [Cucumis melo]1.6e-13390.67Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
        +FYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCS KKPFKITKGKRTPKKNLKHSQNGAS
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS

Query:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEES------------DEEEKPDADDDHKE
        KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQE+SDREIKS+SRGPGAGDHHI+ES            DEEE  DADDD KE
Subjt:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEES------------DEEEKPDADDDHKE

Query:  KPEADDEEEK---DELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
        KPE DDEEEK   D  VEDVESFDQHADN REKTDEDGEADESSSRENIGDDDSDSGKNE TRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
Subjt:  KPEADDEEEK---DELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR

XP_038893525.1 sister chromatid cohesion protein PDS5 homolog B isoform X1 [Benincasa hispida]3.2e-11377.36Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
        +FYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSD KTSKKLKLS+SLPSLEVTLGLKNKD  GS S+KKPFKITKGKRTPKKNLKHSQNGAS
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS

Query:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDA------------------
        KLKFSDAGEKGSSDI+NPGTSKRSNVYDEVDSGDS GEHTQ +DKEFTD+E        DSRG GAGDHHIEESDEEEKPD                   
Subjt:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDA------------------

Query:  --DDDHKEKPEADDEEEK------------DELVEDVESFDQHADNAREKTD-EDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELS
          DD+ +EKP+ADD+EEK            DEL ED ESF+QH DNAREK D ED EADESSSRENI D DSDSGKN+GT F+QQSSPGEE+KGEVDELS
Subjt:  --DDDHKEKPEADDEEEK------------DELVEDVESFDQHADNAREKTD-EDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELS

Query:  DDEPLSKWKHRAGKRGLR
        DDEPLSKWKHRAGKRGLR
Subjt:  DDEPLSKWKHRAGKRGLR

TrEMBL top hitse value%identityAlignment
A0A0A0LYH8 Uncharacterized protein3.5e-150100Show/hide
Query:  MIEGVLLRFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLK
        MIEGVLLRFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLK
Subjt:  MIEGVLLRFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLK

Query:  HSQNGASKLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEAD
        HSQNGASKLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEAD
Subjt:  HSQNGASKLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEAD

Query:  DEEEKDELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
        DEEEKDELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
Subjt:  DEEEKDELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR

A0A1S4E4A6 LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A7.8e-13490.67Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
        +FYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCS KKPFKITKGKRTPKKNLKHSQNGAS
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS

Query:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEES------------DEEEKPDADDDHKE
        KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQE+SDREIKS+SRGPGAGDHHI+ES            DEEE  DADDD KE
Subjt:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEES------------DEEEKPDADDDHKE

Query:  KPEADDEEEK---DELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
        KPE DDEEEK   D  VEDVESFDQHADN REKTDEDGEADESSSRENIGDDDSDSGKNE TRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
Subjt:  KPEADDEEEK---DELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR

A0A5D3E6K9 Sister chromatid cohesion protein PDS5-like protein A7.8e-13490.67Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
        +FYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCS KKPFKITKGKRTPKKNLKHSQNGAS
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS

Query:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEES------------DEEEKPDADDDHKE
        KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQE+SDREIKS+SRGPGAGDHHI+ES            DEEE  DADDD KE
Subjt:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEES------------DEEEKPDADDDHKE

Query:  KPEADDEEEK---DELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
        KPE DDEEEK   D  VEDVESFDQHADN REKTDEDGEADESSSRENIGDDDSDSGKNE TRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
Subjt:  KPEADDEEEK---DELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR

A0A6J1EN67 sister chromatid cohesion protein PDS5 homolog A-like1.1e-10377.62Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
        +FYKGTVKSYDPIKRKHVILYDDGDVEVL+LEKERWE ID DHKTSKKLKLSRS PSLEVTLGLKN+D GGS S+KKPFKI KGKRTPKKNLKHSQ+ A+
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS

Query:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE
        KLKFSDAGEKGSSDI+NPG SK SNVY+EVDSGDS GEH Q +DKEFTDQE+SDREIKSDSRG G G+H+IEE DEEEKPD D D               
Subjt:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE

Query:  LVEDVESFDQHADNAREKTD-EDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
        L ED ESF+QHADNAREK D ED EADES SRENI +D+SD+GK +GT  +QQSSP EE+KG+VDELSDDEPLSKWK RAGKRGLR
Subjt:  LVEDVESFDQHADNAREKTD-EDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR

A0A6J1I6J2 sister chromatid cohesion protein PDS5 homolog A-like2.5e-10377.62Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS
        +FYKGTVKSYDPIKRKHVILYDDGDVEVL+LEKERWE ID DHKTSKKLKLSRS PSLEVTLGLKNKD GGS S+KKPFKI KGKRTPKKNLKHSQ+ A+
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGAS

Query:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE
        KLKFSDAGEKGSSDI+NPG SK SNVY++VDSGDS GEH Q +DKEFTDQE+SDREIKSDSRG G G+H+IEE DEEEKPD D D               
Subjt:  KLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDE

Query:  LVEDVESFDQHADNAREKTD-EDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR
        L ED ESF+Q+ADNAREK D ED EADE  SRENI +DDS+SGK +GT  +QQSSP EE+KG+VDELSDDEPLSKWKHRAGKRGLR
Subjt:  LVEDVESFDQHADNAREKTD-EDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10950.1 Tudor/PWWP/MBT superfamily protein7.5e-0428.48Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSL-EVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGA
        +FYKG V SY   K+KH + Y+DGD E L L+KERWE+I+ D   S+  ++S    S  E + G      G     K   K    +  PKK  K   + +
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSL-EVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGA

Query:  SKLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGE---HTQNVDKEFTDQEESD-REIKSDSRGPGAGD-----HHIEESDEEEKPDAD-----DD
        SK K  +  +K S     P T K   +      GD GG+       + + F  +   D +E    S+ P          H ++ DE+E+   D     ++
Subjt:  SKLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGE---HTQNVDKEFTDQEESD-REIKSDSRGPGAGD-----HHIEESDEEEKPDAD-----DD

Query:  HKEKPEADDEEEKDELVEDVESFDQ----HADNAREKTDEDGEADESSSRE------NIGDDDSDSGKNEG------------TRFKQQSSPGEEEKGE-
         K K         DE+ E+    D+      +N++   DED E +E+S  E       + + +SD+G+N              T  K +S+  +EE G+ 
Subjt:  HKEKPEADDEEEKDELVEDVESFDQ----HADNAREKTDEDGEADESSSRE------NIGDDDSDSGKNEG------------TRFKQQSSPGEEEKGE-

Query:  ------VDELSDDEPL
              VDE+SD EPL
Subjt:  ------VDELSDDEPL

AT5G47690.1 binding1.0e-1634.4Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKIT-KGKRTPKKNLKHSQNGA
        RFY+GTVKSYD  K++HVILY+DGDVEVL L+KE+WE+ID+  KT+KK + S+     + + G K K+  G    + P   T KGKRTPKKNLK      
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKIT-KGKRTPKKNLKHSQNGA

Query:  SKLKFSDAGEKGSSDITNPGTSKRSNVYDEVD-SGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDE--E
        +    S   EK    + +    +RS+   + + SG++G E +++  K   + E+ +  +          +  ++E+  E   DA+    E  ++D E  +
Subjt:  SKLKFSDAGEKGSSDITNPGTSKRSNVYDEVD-SGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDE--E

Query:  EKDELVEDVESFDQHADN
        E +E+  + E   + +DN
Subjt:  EKDELVEDVESFDQHADN

AT5G47690.2 binding1.0e-1634.4Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKIT-KGKRTPKKNLKHSQNGA
        RFY+GTVKSYD  K++HVILY+DGDVEVL L+KE+WE+ID+  KT+KK + S+     + + G K K+  G    + P   T KGKRTPKKNLK      
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKIT-KGKRTPKKNLKHSQNGA

Query:  SKLKFSDAGEKGSSDITNPGTSKRSNVYDEVD-SGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDE--E
        +    S   EK    + +    +RS+   + + SG++G E +++  K   + E+ +  +          +  ++E+  E   DA+    E  ++D E  +
Subjt:  SKLKFSDAGEKGSSDITNPGTSKRSNVYDEVD-SGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDE--E

Query:  EKDELVEDVESFDQHADN
        E +E+  + E   + +DN
Subjt:  EKDELVEDVESFDQHADN

AT5G47690.3 binding5.6e-1532.27Show/hide
Query:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKIT-KGKRTPKKNLKHSQNGA
        RFY+GTVKSYD  K++HVILY+DGDVEVL L+KE+WE+ID+  KT+KK + S+     + + G K K+  G    + P   T KGKRTPKKNLK      
Subjt:  RFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKIT-KGKRTPKKNLKHSQNGA

Query:  SKLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKD
                                               H ++  K  + + E   E ++  R   A     E S E  +  ++ + K   E +D+EE  
Subjt:  SKLKFSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKD

Query:  ELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGK
           ED++           KT+  G+A+   +      DDSD      T  KQ+++  E E  E  E SD+E L  WK + GK
Subjt:  ELVEDVESFDQHADNAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAAGGCGTACTATTAAGATTCTACAAAGGCACAGTGAAATCTTATGACCCAATAAAAAGAAAACATGTGATACTATATGATGATGGAGATGTTGAAGTTCTCAG
ACTTGAGAAAGAGCGGTGGGAGGTCATTGACAGTGATCACAAGACTTCAAAGAAACTAAAACTGTCCAGGAGTCTTCCTTCCCTCGAAGTTACGCTTGGACTGAAGAATA
AAGATTCCGGTGGTTCATGTTCAGTTAAAAAACCATTTAAAATAACGAAAGGAAAAAGGACGCCAAAGAAAAATTTAAAGCATAGTCAAAATGGTGCATCAAAATTAAAA
TTTTCGGATGCTGGCGAGAAAGGGAGTTCAGACATTACAAACCCTGGAACTTCCAAAAGGTCTAATGTTTATGACGAAGTGGACTCAGGTGATTCTGGAGGGGAGCACAC
ACAGAATGTGGACAAGGAGTTCACAGACCAAGAGGAGTCTGACAGGGAAATCAAGTCAGACTCAAGAGGACCAGGTGCAGGAGATCACCATATCGAGGAATCTGATGAAG
AAGAAAAGCCCGATGCTGATGATGATCACAAAGAGAAGCCTGAAGCTGACGATGAAGAAGAGAAGGATGAACTTGTTGAAGATGTTGAGAGTTTTGACCAACATGCTGAT
AATGCAAGAGAAAAAACTGATGAAGACGGGGAAGCTGACGAGTCAAGTTCAAGAGAGAACATTGGCGATGATGACTCCGATTCTGGAAAGAATGAAGGGACAAGATTCAA
ACAACAAAGTAGTCCTGGAGAGGAGGAGAAAGGCGAGGTTGATGAACTTTCTGACGACGAGCCTCTTAGCAAGTGGAAGCATCGAGCAGGAAAACGAGGCTTGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGAAGGCGTACTATTAAGATTCTACAAAGGCACAGTGAAATCTTATGACCCAATAAAAAGAAAACATGTGATACTATATGATGATGGAGATGTTGAAGTTCTCAG
ACTTGAGAAAGAGCGGTGGGAGGTCATTGACAGTGATCACAAGACTTCAAAGAAACTAAAACTGTCCAGGAGTCTTCCTTCCCTCGAAGTTACGCTTGGACTGAAGAATA
AAGATTCCGGTGGTTCATGTTCAGTTAAAAAACCATTTAAAATAACGAAAGGAAAAAGGACGCCAAAGAAAAATTTAAAGCATAGTCAAAATGGTGCATCAAAATTAAAA
TTTTCGGATGCTGGCGAGAAAGGGAGTTCAGACATTACAAACCCTGGAACTTCCAAAAGGTCTAATGTTTATGACGAAGTGGACTCAGGTGATTCTGGAGGGGAGCACAC
ACAGAATGTGGACAAGGAGTTCACAGACCAAGAGGAGTCTGACAGGGAAATCAAGTCAGACTCAAGAGGACCAGGTGCAGGAGATCACCATATCGAGGAATCTGATGAAG
AAGAAAAGCCCGATGCTGATGATGATCACAAAGAGAAGCCTGAAGCTGACGATGAAGAAGAGAAGGATGAACTTGTTGAAGATGTTGAGAGTTTTGACCAACATGCTGAT
AATGCAAGAGAAAAAACTGATGAAGACGGGGAAGCTGACGAGTCAAGTTCAAGAGAGAACATTGGCGATGATGACTCCGATTCTGGAAAGAATGAAGGGACAAGATTCAA
ACAACAAAGTAGTCCTGGAGAGGAGGAGAAAGGCGAGGTTGATGAACTTTCTGACGACGAGCCTCTTAGCAAGTGGAAGCATCGAGCAGGAAAACGAGGCTTGAGGTGAA
CCACGTTCAGAGTTGCTCGGTCACCTAGTATAGTTGTGGAATAATTTTGAATGGCCTATGGCTATGAACAGGATTCCAAGTAAGCTGCTGAACAGGATCATAGGTGCCAA
GTGGGTGCCAGTTTAGGTAAGCGAAAAAATGTGACAAATAGAATATACTGACCCAGTTGCTTCGTAGCAGCTACATGTAGAATGTAACATAGCAGTCACAGATTCTTATG
TTTTAGGGAACCAAAATATTAAGGATTAATAGTTTTTGCTTTAGGGGATAGGTGATTAGGTCTTTTGCATATATTCGTGCGATGCTTTTTTTTCTTTTTTTTCTTCAGTG
CCTTTTGATGACCTTTCTGATTTATATGTTAAAAAGTGCCACATGTATAGTATGAATATACATGTTACTATAGATAATGTATTCATGGTTGAATTGTCA
Protein sequenceShow/hide protein sequence
MIEGVLLRFYKGTVKSYDPIKRKHVILYDDGDVEVLRLEKERWEVIDSDHKTSKKLKLSRSLPSLEVTLGLKNKDSGGSCSVKKPFKITKGKRTPKKNLKHSQNGASKLK
FSDAGEKGSSDITNPGTSKRSNVYDEVDSGDSGGEHTQNVDKEFTDQEESDREIKSDSRGPGAGDHHIEESDEEEKPDADDDHKEKPEADDEEEKDELVEDVESFDQHAD
NAREKTDEDGEADESSSRENIGDDDSDSGKNEGTRFKQQSSPGEEEKGEVDELSDDEPLSKWKHRAGKRGLR