CuGenDBv2

Gene ID	CSPI01G15450
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	SWIM-type domain-containing protein
Genome location	Chr1:10998164..10998610
RNA-Seq Expression	CSPI01G15450
Synteny	CSPI01G15450
Gene Ontology terms	GO:0048507 - meristem development (biological process) GO:0016020 - membrane (cellular component) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR004332 - Transposase, MuDR, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044308.1 uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]

4.5e-63

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        M+FD KE+L LA+K+Y VTQHYEIVVVESNQ++W++RCKQWSNGCNWRLR ++RKSH LFE+++L+GEHSCLYSNLTQDHSQLDSNFMS+QIQN+V+ADP
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         + V +L+E+I+QQYGY VKY RVWQ K+KAL+ VFGDW+KSYNELPY
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

TYK02543.1 uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]

9.9e-63

74.32

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        M+FD KE+L LA+K+Y VTQHYEIVVVESNQ++W++RCKQWSNGCNWRLR ++RKSH LFE+++L+GEHSCLYSNLTQDHSQLDSNFMS++IQN+V+ADP
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         + V +L+E+I+QQYGY VKY RVWQ K+KAL+ VFGDW+KSYNELPY
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

XP_031737534.1 uncharacterized protein LOC116402427 [Cucumis sativus]

2.6e-71

88.51

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        MIFDSKE+L+LA+KRY VTQHYEIVVVESNQHLWNIRCKQW+NGCNWRLR TKRKSH LFE+TKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         I V +L+EII+QQYGY VKYG+VWQ KKKALITVFGDWEKSYNELPY
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

XP_031741740.1 uncharacterized protein LOC116403936 [Cucumis sativus]

7.1e-69

87.84

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        MIFD KE+LLLA+KRY VTQHYEIVVVESNQHLWNIRCKQWSNGC WRLRATKRKSH LFE+TKLQ EHSCLYSNLTQDHSQL SNFMSVQIQNM+KADP
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         I V +LVEII+QQYGY VKYGRVWQ KKKALI VFGDWEKSYNELPY
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

XP_031742190.1 uncharacterized protein LOC116404107 [Cucumis sativus]

1.6e-73

91.22

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        MIFDSKE+L+LA+KRY VTQHYEIVVV+SNQHLWNIRCKQWSNGCNWRLRATKRKSH LFE+TKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         I VP+LVEII+QQYGY VKYGRVWQ KKKALITVFGDWEKSYNELPY
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BS22 uncharacterized protein LOC103492881

6.9e-62

72.97

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        M+FD KE+L LA+K+Y VTQHYEIVVVESNQ++W++RCKQWSN CNWRLR ++RKSH LFE+++L+GEHSCLYSNLTQDHSQLDSNFMS++IQN+V+ADP
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         + V +L+E+I+QQYGY VKY RVWQ K+KAL+ VFGDW+KSYN+LPY
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

A0A5A7SLM1 Uncharacterized protein

3.8e-60

71.62

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        M+FD KE+L LA+K+Y VTQHY+IVVVESNQ++W++RCKQWSNGCNWRLR ++RKSH LFE+++L+GEHSCLYSNLTQDHSQLDSNFMS++IQN+V+AD 
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         + + +L+E+I+QQYGY VKY RVWQ K+KAL+ VFGDW+KSYNEL Y
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

A0A5A7TN56 SWIM-type domain-containing protein

2.2e-63

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        M+FD KE+L LA+K+Y VTQHYEIVVVESNQ++W++RCKQWSNGCNWRLR ++RKSH LFE+++L+GEHSCLYSNLTQDHSQLDSNFMS+QIQN+V+ADP
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         + V +L+E+I+QQYGY VKY RVWQ K+KAL+ VFGDW+KSYNELPY
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

A0A5D3BS92 SWIM-type domain-containing protein

4.8e-63

74.32

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        M+FD KE+L LA+K+Y VTQHYEIVVVESNQ++W++RCKQWSNGCNWRLR ++RKSH LFE+++L+GEHSCLYSNLTQDHSQLDSNFMS++IQN+V+ADP
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         + V +L+E+I+QQYGY VKY RVWQ K+KAL+ VFGDW+KSYNELPY
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

A0A5D3C124 Uncharacterized protein

1.8e-62

73.65

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Query:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP
        M+FD KE+L LA+K+Y VTQHYEIVVVESNQ++W++RCKQWSNGCNWRLR ++RKSH LFE+++L+GEHSCLYSNLTQDHSQLDSNFMS++IQN+++ADP
Subjt:  MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADP

Query:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY
         + V +L E+I+QQYGY VKY RVWQ K+KAL+ VFGDW+KSYNELPY
Subjt:  IIIVPMLVEIIRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64255.1 MuDR family transposase

4.7e-10

30.08

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Query:  VVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADPIIIVPMLVEIIRQQYGYRVKYGRV
        VV E+ +  +   C +W   C W L A + K H L E+ K  G H+C +  + +D     S F + +I+  V+  P   +  L +  +++ GY ++   V
Subjt:  VVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADPIIIVPMLVEIIRQQYGYRVKYGRV

Query:  WQGKKKALITVFGDWEKSYNELP
           K+KA+  VFGDW++S+ + P
Subjt:  WQGKKKALITVFGDWEKSYNELP

Sequences

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CDS sequence

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ATGATCTTTGACTCTAAGGAAAATCTTTTGTTGGCTCTTAAGAGGTATTGGGTGACACAACACTATGAAATTGTTGTAGTCGAATCAAACCAACATTTGTGGAATATTCG
ATGCAAACAGTGGAGTAATGGCTGCAACTGGAGGTTACGTGCTACGAAGCGTAAGAGCCACAAATTGTTTGAAATGACTAAGCTCCAAGGAGAGCACTCGTGTCTGTACT
CAAATTTAACACAAGATCACTCACAGCTAGATTCAAATTTCATGAGTGTTCAAATTCAAAACATGGTGAAAGCTGATCCTATTATTATTGTGCCTATGCTTGTCGAAATC
ATAAGACAACAATACGGTTACCGTGTTAAGTATGGACGAGTTTGGCAAGGAAAGAAAAAAGCTTTGATAACCGTTTTTGGTGATTGGGAGAAATCATATAATGAGCTTCC
ATACTAG

mRNA sequence

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Protein sequence

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MIFDSKENLLLALKRYWVTQHYEIVVVESNQHLWNIRCKQWSNGCNWRLRATKRKSHKLFEMTKLQGEHSCLYSNLTQDHSQLDSNFMSVQIQNMVKADPIIIVPMLVEI
IRQQYGYRVKYGRVWQGKKKALITVFGDWEKSYNELPY

CSPI01G15450 (gene) of Cucumber (PI 183967) v1 genome