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CSPI01G15840 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G15840
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr1:11349600..11349872
RNA-Seq ExpressionCSPI01G15840
SyntenyCSPI01G15840
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059738.1 hypothetical protein E6C27_scaffold551G00160 [Cucumis melo var. makuwa]7.8e-1855.84Show/hide
Query:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKM
        SGG LILW+  + TVH+V+ G+YT+SIHI + D FSF  S VY P D  +  DFW+EL ++AGLGG +WIIGG+F +
Subjt:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKM

RVW14784.1 hypothetical protein CK203_091029 [Vitis vinifera]2.7e-1041.18Show/hide
Query:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKMLLTGLGKI
        SGGILI+W   +    EVV G +++SI   L +  S W   VYGP +     DFW EL D+ GL    W +GGDF ++   L K+
Subjt:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKMLLTGLGKI

RVW33074.1 putative ribonuclease H protein [Vitis vinifera]1.6e-1044.87Show/hide
Query:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKML
        SGGILI+W   + +  EVV G +++SI   L    S W S VYGP +     DFW EL D+AGL    W +GGDF ++
Subjt:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKML

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]6.4e-1244.16Show/hide
Query:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKM
        + GILILW  P+    E++ G+++L+I+  L+DGF FW S +YGP    FH  FW EL D++ L   +WI+ GDF +
Subjt:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKM

XP_031739979.1 uncharacterized protein LOC116403332 [Cucumis sativus]1.2e-1043.21Show/hide
Query:  FSPSGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKML
        +  SGGILILW+    TV + + G +++SIH +   GFS W + VYGP        FW EL  + GL  ENW +GGDF ++
Subjt:  FSPSGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKML

TrEMBL top hitse value%identityAlignment
A0A0A0LW63 Uncharacterized protein1.1e-4698.84Show/hide
Query:  MQFSPSGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKMLLTG
        MQFSPSGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKMLL G
Subjt:  MQFSPSGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKMLLTG

A0A438BUX9 Reverse transcriptase domain-containing protein1.3e-1041.18Show/hide
Query:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKMLLTGLGKI
        SGGILI+W   +    EVV G +++SI   L +  S W   VYGP +     DFW EL D+ GL    W +GGDF ++   L K+
Subjt:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKMLLTGLGKI

A0A438DC91 Putative ribonuclease H protein7.6e-1144.87Show/hide
Query:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKML
        SGGILI+W   + +  EVV G +++SI   L    S W S VYGP +     DFW EL D+AGL    W +GGDF ++
Subjt:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKML

A0A5D3CGF9 Uncharacterized protein3.8e-1855.84Show/hide
Query:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKM
        SGG LILW+  + TVH+V+ G+YT+SIHI + D FSF  S VY P D  +  DFW+EL ++AGLGG +WIIGG+F +
Subjt:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKM

A0A6J1E2G6 uncharacterized protein LOC1110254053.1e-1244.16Show/hide
Query:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKM
        + GILILW  P+    E++ G+++L+I+  L+DGF FW S +YGP    FH  FW EL D++ L   +WI+ GDF +
Subjt:  SGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTCAGTCCTTCTGGTGGTATTCTTATTTTATGGAGACCTCCTGAACACACAGTTCATGAAGTTGTTCATGGTATCTATACTCTATCTATCCATATTGAATTAGC
TGATGGTTTCTCCTTCTGGTGCTCTCCGGTATATGGTCCCTATGACGATTGTTTTCATCTGGATTTTTGGAATGAACTTCATGATGTGGCTGGTTTGGGAGGAGAAAACT
GGATTATTGGTGGGGACTTCAAAATGTTACTCACTGGTCTTGGGAAAATCTCA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTCAGTCCTTCTGGTGGTATTCTTATTTTATGGAGACCTCCTGAACACACAGTTCATGAAGTTGTTCATGGTATCTATACTCTATCTATCCATATTGAATTAGC
TGATGGTTTCTCCTTCTGGTGCTCTCCGGTATATGGTCCCTATGACGATTGTTTTCATCTGGATTTTTGGAATGAACTTCATGATGTGGCTGGTTTGGGAGGAGAAAACT
GGATTATTGGTGGGGACTTCAAAATGTTACTCACTGGTCTTGGGAAAATCTCA
Protein sequenceShow/hide protein sequence
MQFSPSGGILILWRPPEHTVHEVVHGIYTLSIHIELADGFSFWCSPVYGPYDDCFHLDFWNELHDVAGLGGENWIIGGDFKMLLTGLGKIS