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CSPI01G16310 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G16310
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr1:11852340..11852678
RNA-Seq ExpressionCSPI01G16310
SyntenyCSPI01G16310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031737549.1 uncharacterized protein LOC116402439 [Cucumis sativus]1.4e-4589.29Show/hide
Query:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN
        MARVQTLKSEF+VLRMKETETIDEF GKISGLAS FTTL VALEDSSLVKKLLDSVPDKYLPIV GIEQ QDLETM FEEAIGRMKAYEE+TTRL+ENNN
Subjt:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN

Query:  NINGQLLLTHAE
        N +GQLLLTH E
Subjt:  NINGQLLLTHAE

XP_031741713.1 uncharacterized protein LOC116403908 [Cucumis sativus]1.1e-4589.29Show/hide
Query:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN
        MARVQTLKSEFNVLRMKE ETIDEFVGKISGLAS FTTLRVALEDSSLV KLLDSVPDKYLPIV GI+Q QDLETM FEEAIGRMKAYEE+TTR +ENNN
Subjt:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN

Query:  NINGQLLLTHAE
        N +GQLLLTHAE
Subjt:  NINGQLLLTHAE

XP_031741744.1 uncharacterized protein LOC116403940 [Cucumis sativus]3.5e-4488.39Show/hide
Query:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN
        MARVQTLK EFNVL MKETETIDEF GKISGLAS FTTL VALEDSSLVKKLLDSVPDKYLP VAGIEQ QDLETMSFEEAIGRMKAY+E+TTRL+ENNN
Subjt:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN

Query:  NINGQLLLTHAE
        N + QLLLTHAE
Subjt:  NINGQLLLTHAE

XP_031745069.1 uncharacterized protein LOC116405247 [Cucumis sativus]2.4e-4589.29Show/hide
Query:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN
        MARVQTLK EFNVLRMKETE IDEF GKISGLAS FTTL VAL+DSSLVKKLLDSVPDKYLPIVAGIEQ QDLETM FEEAIGRMKAYEE+TTRL+ENNN
Subjt:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN

Query:  NINGQLLLTHAE
        N +GQLLLTHAE
Subjt:  NINGQLLLTHAE

XP_031745073.1 uncharacterized protein LOC116405251 [Cucumis sativus]2.4e-4589.29Show/hide
Query:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN
        MARVQTLK EFNVLRMKETE IDEF GKISGLAS FTTL VAL+DSSLVKKLLDSVPDKYLPIVAGIEQ QDLETM FEEAIGRMKAYEE+TTRL+ENNN
Subjt:  MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNN

Query:  NINGQLLLTHAE
        N +GQLLLTHAE
Subjt:  NINGQLLLTHAE

TrEMBL top hitse value%identityAlignment
C6JSM1 CCHC-type domain-containing protein8.8e-2552.25Show/hide
Query:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN
        AR+QTLKSEF+ +RMK+ E++D++VG+++G++  +  L  +LED++LVKKL D+VP +Y+ ++AGIEQ  DL+TM FE+A+GR+KAYEE+T R      +
Subjt:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN

Query:  INGQLLLTHAE
          GQ+LLT AE
Subjt:  INGQLLLTHAE

Q0IZT5 Os09g0551200 protein1.8e-2562.96Show/hide
Query:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN
        ARVQTLKSEF  L MK+TETIDEF GKISGLA+  + L   + D  LVKKLLDSVP+K+L I+A IEQ  DL+TM FEEAIGR+KA+EE   R++++++N
Subjt:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN

Query:  INGQLLLT
           QLLLT
Subjt:  INGQLLLT

Q0JH75 Os01g0879800 protein2.6e-2455.86Show/hide
Query:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN
        ARVQTLKS+F  L MK+TE+IDEF GKISGLA+  + L V ++D   VKKLLDSVPDK+L ++A IEQ  DL++M F+EAIGR+KAYEE   R+++ ++ 
Subjt:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN

Query:  INGQLLLTHAE
            LL T  +
Subjt:  INGQLLLTHAE

Q2QUP7 Laccase2.6e-2455.86Show/hide
Query:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN
        ARVQTLKS+F  L MK+TE+IDEF GKISGLA+  + L V ++D   VKKLLDSVPDK+L ++A IEQ  DL++M F+EAIGR+KAYEE   R+++ ++ 
Subjt:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN

Query:  INGQLLLTHAE
            LL T  +
Subjt:  INGQLLLTHAE

Q2QVG3 Retrotransposon protein, putative, Ty1-copia subclass1.0e-2562.96Show/hide
Query:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN
        ARVQTLKSEF  L MK+TETIDEF GKISGLA+  + L   + D  LVKKLLDSVP+K+L I+A IEQ  DL+TM FEEAIGR+KA+EE   R++++++N
Subjt:  ARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNN

Query:  INGQLLLT
           QLLLT
Subjt:  INGQLLLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAGTTCAAACCTTGAAGAGTGAGTTTAATGTTCTTCGGATGAAGGAAACCGAGACGATCGATGAGTTCGTAGGAAAAATCAGCGGATTAGCAAGCAATTTCAC
CACCCTCCGAGTTGCACTTGAGGATTCATCATTGGTCAAGAAGCTCCTCGATTCTGTCCCCGACAAATATCTTCCCATTGTCGCCGGAATCGAGCAATTGCAAGATCTCG
AAACCATGTCGTTTGAAGAAGCAATTGGACGGATGAAGGCATACGAGGAACAAACAACACGACTTAAAGAAAACAATAACAACATCAATGGACAACTCCTACTTACCCAT
GCCGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGAGTTCAAACCTTGAAGAGTGAGTTTAATGTTCTTCGGATGAAGGAAACCGAGACGATCGATGAGTTCGTAGGAAAAATCAGCGGATTAGCAAGCAATTTCAC
CACCCTCCGAGTTGCACTTGAGGATTCATCATTGGTCAAGAAGCTCCTCGATTCTGTCCCCGACAAATATCTTCCCATTGTCGCCGGAATCGAGCAATTGCAAGATCTCG
AAACCATGTCGTTTGAAGAAGCAATTGGACGGATGAAGGCATACGAGGAACAAACAACACGACTTAAAGAAAACAATAACAACATCAATGGACAACTCCTACTTACCCAT
GCCGAATAG
Protein sequenceShow/hide protein sequence
MARVQTLKSEFNVLRMKETETIDEFVGKISGLASNFTTLRVALEDSSLVKKLLDSVPDKYLPIVAGIEQLQDLETMSFEEAIGRMKAYEEQTTRLKENNNNINGQLLLTH
AE