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CSPI01G16440 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G16440
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:11958231..11958762
RNA-Seq ExpressionCSPI01G16440
SyntenyCSPI01G16440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]1.6e-2053.33Show/hide
Query:  KLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSW
        KL LV   C AI A    A    +A   P    +ED S FPC SFVP+ATKC+IDV K+ +A HP+CC+AI++L  CSS F   IPS DMI++KS+C SW
Subjt:  KLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSW

Query:  GASIS
        G SIS
Subjt:  GASIS

KAA0050081.1 hypothetical protein E6C27_scaffold675G00650 [Cucumis melo var. makuwa]6.9e-5189.66Show/hide
Query:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD
        MAAKSLKT TMKLIL+F+CCTAIF  PA AMK A+APTQP PF TEDISFFPCFSFVPEATKCMIDVFKHPIA HPTCCKAISKLKSCSSSFFNGIPSAD
Subjt:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD

Query:  MIVIKSVCTSWGASIS
        MI+IKSVCTSWGASIS
Subjt:  MIVIKSVCTSWGASIS

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]7.4e-2154.37Show/hide
Query:  TMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCT
        +MKL LVF+ C AI A    A   A+AP    PF  E+ S   C SF+ EAT CM+DV K+ +A HP+CCKA SKL  CSS F  GIPSADMI+IK +C 
Subjt:  TMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCT

Query:  SWG
         WG
Subjt:  SWG

KGN65096.1 hypothetical protein Csa_004577 [Cucumis sativus]5.8e-58100Show/hide
Query:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD
        MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD
Subjt:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD

Query:  MIVIKSVCTSWGASIS
        MIVIKSVCTSWGASIS
Subjt:  MIVIKSVCTSWGASIS

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]1.1e-2154.29Show/hide
Query:  KLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSW
        KL LV + C AI A    A    +A   P    +ED S FPC SFVP+ATKC+IDV K+ +A HP+CC+AIS+L  CSS F   IPS+DMI++KS+C SW
Subjt:  KLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSW

Query:  GASIS
        G SIS
Subjt:  GASIS

TrEMBL top hitse value%identityAlignment
A0A0A0LYQ3 Uncharacterized protein2.8e-58100Show/hide
Query:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD
        MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD
Subjt:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD

Query:  MIVIKSVCTSWGASIS
        MIVIKSVCTSWGASIS
Subjt:  MIVIKSVCTSWGASIS

A0A5A7U8Y3 Uncharacterized protein1.8e-2048.28Show/hide
Query:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD
        MAA   K P   L  +FI  +++ A P      A         P  DIS FPC SFVP+AT+C+IDV K+ +A HP+CC+AIS+L  CSS F   IPS D
Subjt:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD

Query:  MIVIKSVCTSWGASIS
        MI++KS+C  WG SIS
Subjt:  MIVIKSVCTSWGASIS

A0A5A7U904 Uncharacterized protein3.3e-5189.66Show/hide
Query:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD
        MAAKSLKT TMKLIL+F+CCTAIF  PA AMK A+APTQP PF TEDISFFPCFSFVPEATKCMIDVFKHPIA HPTCCKAISKLKSCSSSFFNGIPSAD
Subjt:  MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSAD

Query:  MIVIKSVCTSWGASIS
        MI+IKSVCTSWGASIS
Subjt:  MIVIKSVCTSWGASIS

A0A5A7U9B0 Uncharacterized protein8.0e-2153.33Show/hide
Query:  KLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSW
        KL LV   C AI A    A    +A   P    +ED S FPC SFVP+ATKC+IDV K+ +A HP+CC+AI++L  CSS F   IPS DMI++KS+C SW
Subjt:  KLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSW

Query:  GASIS
        G SIS
Subjt:  GASIS

A0A5D3CFS6 Uncharacterized protein5.5e-2254.29Show/hide
Query:  KLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSW
        KL LV + C AI A    A    +A   P    +ED S FPC SFVP+ATKC+IDV K+ +A HP+CC+AIS+L  CSS F   IPS+DMI++KS+C SW
Subjt:  KLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSW

Query:  GASIS
        G SIS
Subjt:  GASIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGAAATCACTAAAAACACCTACAATGAAGCTAATCCTCGTATTCATATGCTGTACAGCCATTTTCGCACCACCAGCGGCGGCGATGAAGGTCGCAATGGCGCC
AACACAACCTCAACCATTCCCAACAGAGGATATCTCTTTTTTCCCCTGCTTTTCGTTTGTTCCAGAGGCGACGAAATGTATGATCGATGTGTTTAAACACCCAATTGCTG
CTCACCCCACTTGTTGCAAGGCCATTTCGAAGCTCAAAAGTTGTTCCTCTTCGTTTTTTAATGGAATTCCTTCTGCTGATATGATTGTGATTAAGAGTGTTTGTACTTCG
TGGGGCGCTTCAATTTCTTAG
mRNA sequenceShow/hide mRNA sequence
CCAAAGTTTCGTTACCAGAATTGCAGTTTTTCAATTCCCATAAACATACCAGACGTTTTCAAACTCAATTCTTCTTCCCATATATAACCTTCGTACTCCTCAATTTTCTC
ACAGAAACCAAAAAAAAAATCCCCTAATTCAACCCTTCTCTGAGCTTTTACATCAAAAATTTTCACTAACAATGGCGGCGAAATCACTAAAAACACCTACAATGAAGCTA
ATCCTCGTATTCATATGCTGTACAGCCATTTTCGCACCACCAGCGGCGGCGATGAAGGTCGCAATGGCGCCAACACAACCTCAACCATTCCCAACAGAGGATATCTCTTT
TTTCCCCTGCTTTTCGTTTGTTCCAGAGGCGACGAAATGTATGATCGATGTGTTTAAACACCCAATTGCTGCTCACCCCACTTGTTGCAAGGCCATTTCGAAGCTCAAAA
GTTGTTCCTCTTCGTTTTTTAATGGAATTCCTTCTGCTGATATGATTGTGATTAAGAGTGTTTGTACTTCGTGGGGCGCTTCAATTTCTTAG
Protein sequenceShow/hide protein sequence
MAAKSLKTPTMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFKHPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTS
WGASIS