; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G16470 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G16470
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr1:12002056..12004928
RNA-Seq ExpressionCSPI01G16470
SyntenyCSPI01G16470
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06338.1 uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa]3.4e-10694.61Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
        MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RGSTSQANAS SRENRVRTVLEERPAFKFAAH NSEFPDRIE
Subjt:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE

Query:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
        SIESTFR PERIRYNSLGKDA SSH++RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK PPEVDDSK 
Subjt:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR

Query:  GEQE
        GEQE
Subjt:  GEQE

XP_004150507.1 uncharacterized protein LOC101222911 [Cucumis sativus]2.0e-114100Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
        MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
Subjt:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE

Query:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
        SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
Subjt:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR

Query:  GEQE
        GEQE
Subjt:  GEQE

XP_008443927.1 PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo]1.2e-10695.1Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
        MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RGSTSQANAS SRENRVRTVLEERPAFKFAAH NSEFPDRIE
Subjt:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE

Query:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
        SIESTFR PERIRYNSLGKDA SSH+MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK PPEVDDSK 
Subjt:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR

Query:  GEQE
        GEQE
Subjt:  GEQE

XP_038878631.1 uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida]2.0e-9888.78Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEE-DTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRI
        MGKRKRGSDQTHHDPPLHLSGMVPFSNQ DVRSEE D S ARP+FMKRSRH +SHQYC RGSTS ANAS SRENRV+TVLEERPAFKFAAH NSEFPD I
Subjt:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEE-DTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRI

Query:  ESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSK
        ESIE TF  PERIRYNS GKDAFSSH MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDRSDPPCPLC +PPPEVDDSK
Subjt:  ESIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSK

Query:  RGEQE
         GEQE
Subjt:  RGEQE

XP_038878632.1 uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida]8.2e-10089.22Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
        MGKRKRGSDQTHHDPPLHLSGMVPFSNQ DVRSEED S ARP+FMKRSRH +SHQYC RGSTS ANAS SRENRV+TVLEERPAFKFAAH NSEFPD IE
Subjt:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE

Query:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
        SIE TF  PERIRYNS GKDAFSSH MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDRSDPPCPLC +PPPEVDDSK 
Subjt:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR

Query:  GEQE
        GEQE
Subjt:  GEQE

TrEMBL top hitse value%identityAlignment
A0A0A0LT71 RING-type domain-containing protein9.7e-115100Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
        MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
Subjt:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE

Query:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
        SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
Subjt:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR

Query:  GEQE
        GEQE
Subjt:  GEQE

A0A1S3B956 uncharacterized protein LOC103487402 isoform X25.7e-10795.1Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
        MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RGSTSQANAS SRENRVRTVLEERPAFKFAAH NSEFPDRIE
Subjt:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE

Query:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
        SIESTFR PERIRYNSLGKDA SSH+MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK PPEVDDSK 
Subjt:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR

Query:  GEQE
        GEQE
Subjt:  GEQE

A0A1S4DUW7 uncharacterized protein LOC103487402 isoform X15.6e-9494.57Show/hide
Query:  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD
        GMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RGSTSQANAS SRENRVRTVLEERPAFKFAAH NSEFPDRIESIESTFR PERIRYNSLGKD
Subjt:  GMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD

Query:  AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKRGEQE
        A SSH+MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK PPEVDDSK GEQE
Subjt:  AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKRGEQE

A0A5A7U906 RING-type domain-containing protein5.7e-10795.1Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
        MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RGSTSQANAS SRENRVRTVLEERPAFKFAAH NSEFPDRIE
Subjt:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE

Query:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
        SIESTFR PERIRYNSLGKDA SSH+MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK PPEVDDSK 
Subjt:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR

Query:  GEQE
        GEQE
Subjt:  GEQE

A0A5D3C5B4 RING-type domain-containing protein1.7e-10694.61Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE
        MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHH+SHQYC RGSTSQANAS SRENRVRTVLEERPAFKFAAH NSEFPDRIE
Subjt:  MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIE

Query:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR
        SIESTFR PERIRYNSLGKDA SSH++RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK PPEVDDSK 
Subjt:  SIESTFREPERIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKR

Query:  GEQE
        GEQE
Subjt:  GEQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19680.1 RING/U-box superfamily protein9.9e-1141.18Show/hide
Query:  SSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK
        S  V +  CG C KL+  +     + ++  +LP+ AVL CGHVYHA CLE  ++  ++ DP CP+CT+
Subjt:  SSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTK

AT1G75400.1 RING/U-box superfamily protein2.8e-1345.33Show/hide
Query:  GKDAFS---SHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT
        G   FS   S V + +CG C KL+  +     +++++ ELP+AAVL CGHVYHAECLE  ++  ++ DP CP+CT
Subjt:  GKDAFS---SHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT

AT2G21500.1 RING/U-box superfamily protein1.7e-1046.67Show/hide
Query:  CGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT
        CG C + L  + L       +++EL VAA+L CGHVYH+ECLE  +   D+ DP CP+CT
Subjt:  CGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT

AT2G21500.2 RING/U-box superfamily protein1.7e-1046.67Show/hide
Query:  CGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT
        CG C + L  + L       +++EL VAA+L CGHVYH+ECLE  +   D+ DP CP+CT
Subjt:  CGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT

AT4G39140.1 RING/U-box superfamily protein2.9e-1040Show/hide
Query:  LGKDAFSSHVMRM------ICGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT
        L +D    H  RM       CG C + L  + L        ++EL V+A+L CGHVYH ECLE  +   D+ DP CP+CT
Subjt:  LGKDAFSSHVMRM------ICGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGATAC
GAGTCTTGCCCGTCCAATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACC
GAGTCAGAACTGTCCTTGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAA
AGGATAAGGTACAATTCCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAA
CACACTTTCTTCTAGTGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCAC
CTTGTCCATTGTGCACAAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGA
mRNA sequenceShow/hide mRNA sequence
CGATTTAGGAAGGGCATCGGTCAAAAAGGAAAAGGGAATAATATGAAAGGAAGAGGAAGAGGGTTAGAAGAAGTCGAATAAATCATACATACAACAAATCAATTGTTCAT
CTCTTCTTTACTCATTTTCTTGAACCGTAAATCCCCAGCAATTACAATTATATCAAATCCACCTTTCTGTTTCTGCTCCCAAAAGGCCCCAAACAAAACAAAGAAACCAT
TCTTTCAATCCATTTCAAAGCATCATCGCCTAAATTTAACCTCCAAATTATATCAATCATCACTCTCTTCGCTTCATTTACAATCTTAATTACTATGGGGAAGCGCAAGC
GAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTCTCCGGTATGGTTCCTTTTTCTAATCAGACGGATGTGCGGTCGGAAGAGGATACGAGTCTTGCCCGTCCA
ATATTCATGAAACGTTCACGTCATCACCATAGCCATCAATATTGTTGGCGAGGTTCAACCAGTCAAGCAAATGCATCTGCGTCCCGTGAAAACCGAGTCAGAACTGTCCT
TGAGGAACGACCCGCTTTTAAATTTGCTGCTCATTACAACTCAGAGTTTCCAGACCGTATAGAGAGCATTGAGAGCACCTTTAGGGAGCCAGAAAGGATAAGGTACAATT
CCTTGGGGAAGGATGCTTTTTCATCTCATGTAATGAGAATGATATGTGGTATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTAGGGAACACACTTTCTTCTAGT
GAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCAAGTGTGGAAGATAGAAGCGACCCACCTTGTCCATTGTGCAC
AAAACCGCCTCCTGAAGTCGATGATTCAAAAAGAGGAGAACAAGAATGAGTGGAGTTGTACATATGTTATCACATAGCACCAACATAGGAAATAGAGAACTTGGTTCTGA
CTTGAATGGGCATATCAAAAAGTGGAGTTTTTGCATCCTCGATTGATTTTCCAAACTAATCAATCACTGTTTTCTCTGGATGGCTGTGATTTAGAAACAGAAAATAGTAA
CTTTGAATCACAACCATTCAGAAAATAGCGATAATGGGTTGAAAGGTAACAAGGATTTGCCCTCCTTAGATTTCTTTTTGTGTAGAGCTAGATTGACATATGGAAGTCCT
TTGGTACCTTATGGAAACATTGTTATCTTGCATAGCAGCAGAGGATTTTAGTCGAGACATCTTCATGGTATTTTGTACTTTTTATATCAATGTCTAAAATAGTATATTTT
AGAAAGTATCGATGTTAGCAAAGTTATAATGGAAGTAGATTTTTGTGTTTTCCTTGTAGAAAAAATGATGGTAATGAGTAATCTATTTCAAAGGTTGTG
Protein sequenceShow/hide protein sequence
MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRGSTSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPE
RIRYNSLGKDAFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDRSDPPCPLCTKPPPEVDDSKRGEQE