| GenBank top hits | e value | %identity | Alignment |
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| ADN33807.1 ty1-copia retrotransposon protein [Cucumis melo subsp. melo] | 3.4e-66 | 41.81 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
KQL+VDYVL D P+ DP S+P+SS G L V V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP+VEQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+ +LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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| KAA0066784.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.4e-66 | 41.81 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
KQL+VDYVL D P+ DP S+P+SS G L V V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP+VEQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+ +LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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| TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.4e-66 | 41.59 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
+QL+VDYVL D P+ DP S+P+SS G L V V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP++EQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+Q+LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN +FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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| TYK26791.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.6e-66 | 41.59 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
+QL+VDYVL D P+ DP S+P+SS G L + V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP+VEQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+Q+LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN +FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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| TYK27931.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.0e-66 | 41.81 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
KQL+VDYVL D P+ DP S+P+SS G L V V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP+VEQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+ +LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN +FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7VHG8 Ty1-copia retrotransposon protein | 1.7e-66 | 41.81 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
KQL+VDYVL D P+ DP S+P+SS G L V V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP+VEQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+ +LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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| A0A5D3BZI1 Ty1-copia retrotransposon protein | 1.7e-66 | 41.59 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
+QL+VDYVL D P+ DP S+P+SS G L V V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP++EQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+Q+LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN +FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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| A0A5D3DSQ3 Ty1-copia retrotransposon protein | 1.3e-66 | 41.59 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
+QL+VDYVL D P+ DP S+P+SS G L + V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP+VEQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+Q+LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN +FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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| A0A5D3DWC4 Ty1-copia retrotransposon protein | 9.7e-67 | 41.81 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
KQL+VDYVL D P+ DP S+P+SS G L V V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP+VEQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+ +LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN +FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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| E5GBG5 Ty1-copia retrotransposon protein | 1.7e-66 | 41.81 | Show/hide |
Query: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
KQL+VDYVL D P+ DP S+P+SS G L V V D +KK ID EK
Subjt: KQLKVDYVLVLD-PSCDPQKIIFVPSNPKSSFGLL--VIVVDHMKKVSTIDSEK----------------------------------------------
Query: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
KK K + QMT++KP+VEQIHEYENLV +L E MKMCEILQANVLLEK PP N+YRN+LKHKKKD K+ +LI MRT+E N LKDKLAS NLN
Subjt: -AKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLN
Query: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
VNANLV SS VNRD KQE+ HKSYQCNQRKGRP+Q PQA LA+QD ++ AA+V
Subjt: FVNANLVYSSTVNRDMYKQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVV-----------
Query: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
EDT DGECVFMGNS +GK KV KL+S KN FV
Subjt: --------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSS-----------------------------------------PKNEEFVS
Query: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
KGYLSNGLFV N +SMNAN SSSAY++ES +LWHG L S+R L+ +R
Subjt: KGYLSNGLFVFNNVSMNANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIR
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