; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G16660 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G16660
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrotransposon protein
Genome locationChr1:12246767..12248080
RNA-Seq ExpressionCSPI01G16660
SyntenyCSPI01G16660
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-16271.39Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD   + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC +ST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+LAHDVKNR+IQR+F+RSGET+SRHFN+VLLAV+RLH+ELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++PN L VP+      +  YPNAEGFLAPYRGQRYHLQEWRG  NAP+T+KE+FNMKHS+ARNVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRD+LA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-16271.65Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD   + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC +ST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+LAHDVKNR+IQR+F+RSGET+SRHFN+VLLAV+RLHDELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++PN L VP+      +  YPNAEGFLAPYRGQRYHLQEWRG  NAP+T+KE+FNMKHS+ARNVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRD+LA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

KAA0047510.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-16171.39Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD Q + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC EST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+LAHDVKNR+IQR+F+RSGET+S HFN+VLLAV+RLH+ELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++PNGL VP+      +  YPN EGFLAPYRGQRYHLQEW G  NAP+T+KE+FNMKH +ARNVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRDDLA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

KAA0051057.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-16171.13Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD   + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC +ST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+L HDVKNR+IQR+F+RSGET+SRHFN+VLLAV+RLH+ELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++PN L VP+      +  YPNAEGFLAPYRGQRYHLQEWRG  NAP+T+KE+FNMKHS ARNVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRD+LA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-16171.13Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD   + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC +ST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+LAHDVKNR+IQR+F+RSGET+SRHFN+VLLAV+RLH+ELLKKPQPV N  TD RW CFEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++ N L VP+      +  YPNAEGFLAPYRGQ YHLQEWRG  NAP+T+KE+FNMKHS+A NVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRDDLA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein5.2e-16271.39Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD Q + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC EST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+LAHDVKNR+IQR+F+RSGET+S HFN+VLLAV+RLH+ELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++PNGL VP+      +  YPN EGFLAPYRGQRYHLQEW G  NAP+T+KE+FNMKH +ARNVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRDDLA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

A0A5A7TXW1 Retrotransposon protein1.0e-16271.65Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD   + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC +ST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+LAHDVKNR+IQR+F+RSGET+SRHFN+VLLAV+RLHDELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++PN L VP+      +  YPNAEGFLAPYRGQRYHLQEWRG  NAP+T+KE+FNMKHS+ARNVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRD+LA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

A0A5A7U9H2 Retrotransposon protein3.4e-16171.13Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD   + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC +ST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+L HDVKNR+IQR+F+RSGET+SRHFN+VLLAV+RLH+ELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++PN L VP+      +  YPNAEGFLAPYRGQRYHLQEWRG  NAP+T+KE+FNMKHS ARNVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRD+LA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

A0A5A7VG29 Retrotransposon protein2.0e-16171.13Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD   + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC +ST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+LAHDVKNR+IQR+F+RSGET+SRHFN+VLLAV+RLH+ELLKKPQPV N  TD RW CFEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++ N L VP+      +  YPNAEGFLAPYRGQ YHLQEWRG  NAP+T+KE+FNMKHS+A NVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRDDLA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

A0A5D3BDX0 Retrotransposon protein3.0e-16271.39Show/hide
Query:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF
        MD   + +I+  F ++  QL+L+L+ L ND KR++H PYE RH+IRQL+YFRMIH SDLVC +ST MDRR F+ILCHLLRTI GL STE+VDV+EMVAMF
Subjt:  MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMF

Query:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC
        LH+LAHDVKNR+IQR+F+RSGET+SRHFN+VLLAV+RLH+ELLKKPQPV N  TD RW  FEN LGALD TYIKVNVP +DR RYRTRKGEVATNVLGVC
Subjt:  LHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVC

Query:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK
        D KGDF++VLAGW+GSAADSRILRDA+++PN L VP+      +  YPNAEGFLAPYRGQRYHLQEWRG  NAP+T+KE+FNMKHS+ARNVIERAF +LK
Subjt:  DMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQD-----NQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLK

Query:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE
        GRW IL GKSYYPV++QCRTILACC LHNLIN EMTN +    +DE DST+AT   DDI ++E SNEW+QWRD+LA EMF EW+ RN+
Subjt:  GRWTILPGKSYYPVQIQCRTILACCPLHNLINHEMTNVNF---VDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein4.4e-2827.8Show/hide
Query:  VLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRS
        +++  AL   ++     P +    +   + +R +      C +   M    F+ LC++L+T   L  T  + ++E VAMFL +  H+   R +   F R+
Subjt:  VLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRS

Query:  GETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSR-------WSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGW
         ETV R F  VL A   L  + ++ P      R   R       W  F  ++GA+D T++ V V    +  Y  R    + N++ +CD+K  F ++  G 
Subjt:  GETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSR-------WSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGW

Query:  KGSAADSRILRDAIAQPNGLHVPQDNQI------YPNAEGFLAPYRGQ-----RYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLKGR
         GS  D+ +L+ A    +   +P   +       YPN +G LAPYR       RYH+ ++   G  P    E FN  H++ R+VIER F + K +
Subjt:  KGSAADSRILRDAIAQPNGLHVPQDNQI------YPNAEGFLAPYRGQ-----RYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLKGR

AT5G28730.1 unknown protein1.5e-1530.23Show/hide
Query:  IHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTR
        I+S+++ C     M    F+ LC +L    GL S+  + + E VA+FL + A +   R I   F  + ET+ R F+ VL A+ RL  E + +P+ V   R
Subjt:  IHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTR

Query:  T-DSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQI------YPNAE
           +R      Y   L D                   G  + NVL +CD+   F +   G  GS  D+R+L  AI+     HVP D++       Y N  
Subjt:  T-DSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQI------YPNAE

Query:  GFLAPYRGQRYHLQE
        G+LAPYR +    Q+
Subjt:  GFLAPYRGQRYHLQE

AT5G28950.1 unknown protein4.2e-1534.82Show/hide
Query:  FENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQ-PNGLHVPQDN--------QIYPNAEGFLAP
        F++ +GA+DDT+I   V Q     +R RKG+++ N+L  C+   +F++VL+GW+GSA DS++L DA+ +  N L VP+++        ++  N +  L  
Subjt:  FENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQ-PNGLHVPQDN--------QIYPNAEGFLAP

Query:  YRGQRYHLQEWR
           QR +  +WR
Subjt:  YRGQRYHLQEWR

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.0e-2134.05Show/hide
Query:  FIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLKGRWTILPGKS
        FI+VL+GW+GSA DSR+L DA+ +    ++      + N   FLAP+RG RYHLQE+ G    P T  E FN++H + RNVIER F + K R+ I     
Subjt:  FIFVLAGWKGSAADSRILRDAIAQPNGLHVPQDNQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLKGRWTILPGKS

Query:  YYPVQIQCRTILACCPLHNLINHEMTN--VNFVDE--GDSTYATIGGDDIQFVENSNE------------WTQWRDDLAAEMFNE
         +  + Q   +L C  LHN +  E  +   +F DE   +       G+ +   E  NE               WR  +A +M+ +
Subjt:  YYPVQIQCRTILACCPLHNLINHEMTN--VNFVDE--GDSTYATIGGDDIQFVENSNE------------WTQWRDDLAAEMFNE

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)9.1e-4230.95Show/hide
Query:  FRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVT
        +++++  +  C E+  MD+  F  LC LL+T   L  T  + ++  +A+FL ++ H+++ R +Q  F  SGET+SRHFN VL AV+ +  +     QP +
Subjt:  FRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKNRIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVT

Query:  NTRT-DSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQ------DNQIYP
        N+ T ++    F++ +G +D  +I V V   ++  +R   G +  NVL        F +VLAGW+GSA+D ++L  A+ + N L VPQ      DN+ YP
Subjt:  NTRT-DSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADSRILRDAIAQPNGLHVPQ------DNQIYP

Query:  NAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLKGRWTILPGKSYYPVQIQCRTILACCPLHNLINHE---------MTNVN
        N  GF+APY G          + N+   AKE FN +H      I R F  LK R+ IL     YP+Q Q + ++A C LHN +  E              
Subjt:  NAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLKGRWTILPGKSYYPVQIQCRTILACCPLHNLINHE---------MTNVN

Query:  FVDEGDSTYATIGGDDIQFV--------ENSNEWTQWRDDLAAEMFNEW
          + G+     +  + ++ V        E   +  + RD++A+E++N +
Subjt:  FVDEGDSTYATIGGDDIQFV--------ENSNEWTQWRDDLAAEMFNEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAACCAAAACATTCGCACTATACTAGCTGTCTTCACATCCACCCATAATCAGTTAGTACTGCTATTGGATGCACTAATGAATGACAATAAGCGGGTGTCCCATAC
ACCTTACGAATTTAGGCATCAAATTAGACAACTATCATACTTTCGTATGATACACTCCTCCGACCTTGTTTGTTGTGAAAGTACCATAATGGACAGACGAACTTTTTCCA
TTCTATGTCACTTACTAAGGACGATTGTTGGTCTGATGTCGACCGAAATCGTCGATGTCAAGGAGATGGTCGCCATGTTTCTGCATGTATTGGCACATGATGTCAAGAAT
AGAATCATCCAACGGGATTTCGTGCGATCAGGAGAGACTGTTTCCCGTCACTTTAACCTCGTACTGTTGGCGGTGTTGCGATTGCACGATGAGTTGTTGAAGAAACCCCA
GCCAGTGACTAACACACGCACTGATTCAAGATGGAGTTGCTTCGAGAACTACCTTGGGGCATTGGATGACACGTACATCAAGGTGAACGTGCCGCAAACCGATAGGCTTA
GGTATAGAACACGTAAGGGAGAAGTTGCCACAAACGTCCTCGGTGTGTGTGATATGAAAGGCGACTTCATCTTCGTATTGGCTGGTTGGAAAGGATCTGCAGCAGATTCA
CGCATTCTTCGAGATGCTATTGCACAACCAAATGGACTGCATGTTCCTCAGGATAATCAAATATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGATA
CCACTTGCAAGAGTGGCGAGGAGCGGGAAATGCCCCTGCCACCGCGAAAGAGTACTTCAACATGAAACATTCTACCGCTAGGAATGTTATTGAACGAGCGTTCGAGTTGT
TGAAGGGTCGATGGACAATCCTTCCTGGCAAGTCGTACTATCCCGTGCAAATTCAATGTCGAACAATTCTAGCGTGTTGCCCACTACACAATCTCATCAACCACGAGATG
ACGAATGTCAATTTCGTTGACGAAGGAGACTCCACCTACGCCACGATTGGAGGTGATGACATTCAGTTCGTTGAGAACTCAAATGAATGGACGCAGTGGAGGGATGATTT
GGCCGCAGAGATGTTCAATGAATGGCAGTTTCGTAACGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAACCAAAACATTCGCACTATACTAGCTGTCTTCACATCCACCCATAATCAGTTAGTACTGCTATTGGATGCACTAATGAATGACAATAAGCGGGTGTCCCATAC
ACCTTACGAATTTAGGCATCAAATTAGACAACTATCATACTTTCGTATGATACACTCCTCCGACCTTGTTTGTTGTGAAAGTACCATAATGGACAGACGAACTTTTTCCA
TTCTATGTCACTTACTAAGGACGATTGTTGGTCTGATGTCGACCGAAATCGTCGATGTCAAGGAGATGGTCGCCATGTTTCTGCATGTATTGGCACATGATGTCAAGAAT
AGAATCATCCAACGGGATTTCGTGCGATCAGGAGAGACTGTTTCCCGTCACTTTAACCTCGTACTGTTGGCGGTGTTGCGATTGCACGATGAGTTGTTGAAGAAACCCCA
GCCAGTGACTAACACACGCACTGATTCAAGATGGAGTTGCTTCGAGAACTACCTTGGGGCATTGGATGACACGTACATCAAGGTGAACGTGCCGCAAACCGATAGGCTTA
GGTATAGAACACGTAAGGGAGAAGTTGCCACAAACGTCCTCGGTGTGTGTGATATGAAAGGCGACTTCATCTTCGTATTGGCTGGTTGGAAAGGATCTGCAGCAGATTCA
CGCATTCTTCGAGATGCTATTGCACAACCAAATGGACTGCATGTTCCTCAGGATAATCAAATATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGATA
CCACTTGCAAGAGTGGCGAGGAGCGGGAAATGCCCCTGCCACCGCGAAAGAGTACTTCAACATGAAACATTCTACCGCTAGGAATGTTATTGAACGAGCGTTCGAGTTGT
TGAAGGGTCGATGGACAATCCTTCCTGGCAAGTCGTACTATCCCGTGCAAATTCAATGTCGAACAATTCTAGCGTGTTGCCCACTACACAATCTCATCAACCACGAGATG
ACGAATGTCAATTTCGTTGACGAAGGAGACTCCACCTACGCCACGATTGGAGGTGATGACATTCAGTTCGTTGAGAACTCAAATGAATGGACGCAGTGGAGGGATGATTT
GGCCGCAGAGATGTTCAATGAATGGCAGTTTCGTAACGAATAG
Protein sequenceShow/hide protein sequence
MDNQNIRTILAVFTSTHNQLVLLLDALMNDNKRVSHTPYEFRHQIRQLSYFRMIHSSDLVCCESTIMDRRTFSILCHLLRTIVGLMSTEIVDVKEMVAMFLHVLAHDVKN
RIIQRDFVRSGETVSRHFNLVLLAVLRLHDELLKKPQPVTNTRTDSRWSCFENYLGALDDTYIKVNVPQTDRLRYRTRKGEVATNVLGVCDMKGDFIFVLAGWKGSAADS
RILRDAIAQPNGLHVPQDNQIYPNAEGFLAPYRGQRYHLQEWRGAGNAPATAKEYFNMKHSTARNVIERAFELLKGRWTILPGKSYYPVQIQCRTILACCPLHNLINHEM
TNVNFVDEGDSTYATIGGDDIQFVENSNEWTQWRDDLAAEMFNEWQFRNE