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CSPI01G16820 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G16820
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDDE Tnp4 domain-containing protein
Genome locationChr1:12542322..12546732
RNA-Seq ExpressionCSPI01G16820
SyntenyCSPI01G16820
Gene Ontology termsGO:0000054 - ribosomal subunit export from nucleus (biological process)
GO:0006606 - protein import into nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7146831.1 hypothetical protein RHSIM_Rhsim04G0134000 [Rhododendron simsii]6.5e-2141.96Show/hide
Query:  DFDSDDDDDICIIFTLLHMSLHKIHS---SKQPCRTSALREHDYVIELLNENDSRCFDCFRMKGVTF------------------------DCIGAIDGT
        + +SD DD+   I TL+ ++LH+ H    S+ PCRTS LR HDYV+E+LN +D+RC + FRM+   F                        DCIGAIDGT
Subjt:  DFDSDDDDDICIIFTLLHMSLHKIHS---SKQPCRTSALREHDYVIELLNENDSRCFDCFRMKGVTF------------------------DCIGAIDGT

Query:  HVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
        H+   +P  EQIP+  R    + N+M  CSFDM FT V+ GW+
Subjt:  HVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
KGN65306.2 hypothetical protein Csa_017722, partial [Cucumis sativus]2.5e-28100Show/hide
Query:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWKDRSMILAYL
        DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWKDRSMILAYL
Subjt:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWKDRSMILAYL
TYK06269.1 protein ALP1-like [Cucumis melo var. makuwa]1.9e-2049.61Show/hide
Query:  MRIFGDTTATGDFDSDDDDDICIIFTLLHMSLHKIHSSKQPCRTSALREHDYVIELLNENDSRCFDCFRMKGVTF--DCIGAIDGTHVPTSIPQNEQIPF
        M +  D  +   FDSDDDDD          S H I  +         +    +I   N +          K   F  DCIGAIDGTHV  SIPQNEQIPF
Subjt:  MRIFGDTTATGDFDSDDDDDICIIFTLLHMSLHKIHSSKQPCRTSALREHDYVIELLNENDSRCFDCFRMKGVTF--DCIGAIDGTHVPTSIPQNEQIPF

Query:  RRRKTNTTWNIMWVCSFDMLFTYVMSGWK
        R RKTNTTWNIM VCSFDMLFTYVMSGW+
Subjt:  RRRKTNTTWNIMWVCSFDMLFTYVMSGWK
TYK21096.1 protein ALP1-like [Cucumis melo var. makuwa]7.9e-1990.38Show/hide
Query:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
        DCIGAIDGTHV  SIPQNEQIPFR RKTNTTWNIM VCSFDMLFTYVMSGW+
Subjt:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
XP_030508873.1 putative nuclease HARBI1 [Cannabis sativa]4.2e-2047.79Show/hide
Query:  DDICIIFTLLHMSLHKIHSSKQPCRTSALREHDYVIELLNENDSRCFDCFRMKGVTF----DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCS
        D++ II T   +  H     K+PCR S      +++E+LN ND RC + FRM+ + F    DCIGAIDGTHV  S+P ++QIP+  RK   T NIM VC 
Subjt:  DDICIIFTLLHMSLHKIHSSKQPCRTSALREHDYVIELLNENDSRCFDCFRMKGVTF----DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCS

Query:  FDMLFTYVMSGWK
        FDMLFT+V +GW+
Subjt:  FDMLFTYVMSGWK
TrEMBL top hitse value%identityAlignment
A0A1S4E0U9 uncharacterized protein LOC1034960411.3e-1482.69Show/hide
Query:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
        D IGAID THV  SI QNEQI FR RKTNTTWNIM VCSFDMLFTYVMSGW+
Subjt:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
A0A2I0K9J0 DDE Tnp4 domain-containing protein1.2e-1539.02Show/hide
Query:  QPCRTSALREHDYVIELLNENDSRCFDCFRM----------------------KGVTFD-------------CIGAIDGTHVPTSIPQNEQIPFRRRKTN
        +PCR SAL+   Y++ELL  +D RCF+ FRM                      +G+T +             CIGAIDGTHV T +PQ  ++P+R R   
Subjt:  QPCRTSALREHDYVIELLNENDSRCFDCFRM----------------------KGVTFD-------------CIGAIDGTHVPTSIPQNEQIPFRRRKTN

Query:  TTWNIMWVCSFDMLFTYVMSGWK
         + N++  CS DM+FTYVM+GWK
Subjt:  TTWNIMWVCSFDMLFTYVMSGWK
A0A5A7VNL5 Putative nuclease HARBI1 isoform X13.8e-1990.38Show/hide
Query:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
        DCIGAIDGTHV  SIPQNEQIPFR RKTNTTWNIM VCSFDMLFTYVMSGW+
Subjt:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
A0A5D3C7F6 Protein ALP1-like9.1e-2149.61Show/hide
Query:  MRIFGDTTATGDFDSDDDDDICIIFTLLHMSLHKIHSSKQPCRTSALREHDYVIELLNENDSRCFDCFRMKGVTF--DCIGAIDGTHVPTSIPQNEQIPF
        M +  D  +   FDSDDDDD          S H I  +         +    +I   N +          K   F  DCIGAIDGTHV  SIPQNEQIPF
Subjt:  MRIFGDTTATGDFDSDDDDDICIIFTLLHMSLHKIHSSKQPCRTSALREHDYVIELLNENDSRCFDCFRMKGVTF--DCIGAIDGTHVPTSIPQNEQIPF

Query:  RRRKTNTTWNIMWVCSFDMLFTYVMSGWK
        R RKTNTTWNIM VCSFDMLFTYVMSGW+
Subjt:  RRRKTNTTWNIMWVCSFDMLFTYVMSGWK
A0A5D3DC11 Protein ALP1-like3.8e-1990.38Show/hide
Query:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
        DCIGAIDGTHV  SIPQNEQIPFR RKTNTTWNIM VCSFDMLFTYVMSGW+
Subjt:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein4.1e-0541.67Show/hide
Query:  IGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSG
        +GA+DGTHV   +  + Q  +  R  N + NIM +C   MLFTY+ +G
Subjt:  IGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSG
AT5G28950.1 unknown protein1.4e-0844.23Show/hide
Query:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
        DC+GAID TH+   + Q +   FR RK + + N++  C+FD+ F YV+SGW+
Subjt:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.1e-0740.38Show/hide
Query:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK
        DC+G +D  H+P  +  +EQ PFR      T N++   SFD+ F YV++GW+
Subjt:  DCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCTCTAACCTTGGATTGCAAAGACAAGTTCACAGAACTGTCTGCAGTGGAGATGTGCACCCAAGGCATGTACGGGAACTTCTCTATATTTTACAAGGAATAAA
ACCCCGTACATTTGAAGAACTATCAACTCGTGCCCACGGCATAGAGTTGGGCATTGCTAATAAGGGAACTAAAGATTTCTTAGGGCCCCGGCTTTTTGGTCCTCTTCGCT
TTTCTTCGGCCAAAGCGTTCCTCTCCGACGACTCCTTTCTTCAGCTCTCCTCACTTTTCTTAAAGTTTTACTATTACATCGAGATGACACAAAAATCATCTGCACAACGT
GATTGTGTCGATGAGGTTGCTGAGGTTGATGGATTAAGAAGTGAGGGACCATGGTCAGAAAAGAGTGAAACTATGTTTGTAGACTTAATGGATGAAGAGGTGAATAAGAG
AGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTTATGAGGATTTTTGGAGATACTACTGCAACAGGTGATTTTGATTCTGACGACGATGATGATATAT
GCATCATTTTTACTTTATTACACATGAGCTTGCACAAGATACATTCTTCTAAACAACCATGTAGAACCTCTGCACTAAGAGAACATGATTATGTGATCGAGTTGTTAAAT
GAAAACGATAGTAGATGTTTTGATTGTTTTAGGATGAAAGGAGTTACATTCGATTGTATTGGTGCTATTGATGGCACTCACGTTCCGACAAGTATTCCCCAAAATGAGCA
AATACCATTTCGTAGAAGAAAAACTAACACAACATGGAATATAATGTGGGTATGTTCATTTGATATGTTATTCACGTATGTCATGTCTGGTTGGAAGGATCGATCAATGA
TTCTCGCATACTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCTCTAACCTTGGATTGCAAAGACAAGTTCACAGAACTGTCTGCAGTGGAGATGTGCACCCAAGGCATGTACGGGAACTTCTCTATATTTTACAAGGAATAAA
ACCCCGTACATTTGAAGAACTATCAACTCGTGCCCACGGCATAGAGTTGGGCATTGCTAATAAGGGAACTAAAGATTTCTTAGGGCCCCGGCTTTTTGGTCCTCTTCGCT
TTTCTTCGGCCAAAGCGTTCCTCTCCGACGACTCCTTTCTTCAGCTCTCCTCACTTTTCTTAAAGTTTTACTATTACATCGAGATGACACAAAAATCATCTGCACAACGT
GATTGTGTCGATGAGGTTGCTGAGGTTGATGGATTAAGAAGTGAGGGACCATGGTCAGAAAAGAGTGAAACTATGTTTGTAGACTTAATGGATGAAGAGGTGAATAAGAG
AGCTAAAAAGTTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTTATGAGGATTTTTGGAGATACTACTGCAACAGGTGATTTTGATTCTGACGACGATGATGATATAT
GCATCATTTTTACTTTATTACACATGAGCTTGCACAAGATACATTCTTCTAAACAACCATGTAGAACCTCTGCACTAAGAGAACATGATTATGTGATCGAGTTGTTAAAT
GAAAACGATAGTAGATGTTTTGATTGTTTTAGGATGAAAGGAGTTACATTCGATTGTATTGGTGCTATTGATGGCACTCACGTTCCGACAAGTATTCCCCAAAATGAGCA
AATACCATTTCGTAGAAGAAAAACTAACACAACATGGAATATAATGTGGGTATGTTCATTTGATATGTTATTCACGTATGTCATGTCTGGTTGGAAGGATCGATCAATGA
TTCTCGCATACTTATGA
Protein sequenceShow/hide protein sequence
MESSNLGLQRQVHRTVCSGDVHPRHVRELLYILQGIKPRTFEELSTRAHGIELGIANKGTKDFLGPRLFGPLRFSSAKAFLSDDSFLQLSSLFLKFYYYIEMTQKSSAQR
DCVDEVAEVDGLRSEGPWSEKSETMFVDLMDEEVNKRAKKFRKSGCPHYEKLMRIFGDTTATGDFDSDDDDDICIIFTLLHMSLHKIHSSKQPCRTSALREHDYVIELLN
ENDSRCFDCFRMKGVTFDCIGAIDGTHVPTSIPQNEQIPFRRRKTNTTWNIMWVCSFDMLFTYVMSGWKDRSMILAYL