; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G16860 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G16860
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibonuclease H
Genome locationChr1:12611140..12612944
RNA-Seq ExpressionCSPI01G16860
SyntenyCSPI01G16860
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR036397 - Ribonuclease H superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]6.9e-11045.35Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        MVDATTGH+ LSFMDGSSGYNQIRMALS EEMTAF T K IY YKVMPF  K V ATYQRAMQKVFDDMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD
         LRKYQLRMNPLKCAFGVTS KFLGFI                                                                     N FD
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD

Query:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV
        SIKKY    P  G+    + + +      + L ++       GKE+                                LRHYMQAF VHLVAKA+ IK+V
Subjt:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV

Query:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA
        LSRPIISG LAKWA                                   LC+D+PDDEVFFTEVMEPWTMYF GAARRSG GAGIVLIS  KHMLPYSFA
Subjt:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA

Query:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-
        L E C NNVAEYQALIIGLQ+ALEI VSFI++Y                                        EHVPRVENKR DALANLATAL MP+D 
Subjt:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-

Query:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG
                            EVN+ TS+LIDEEDWRQPIIE+LEH KLPKDS HK                               KE+SVKALKEVHAG
Subjt:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG

Query:  VCGVHQSEPKLQF
        VCG HQS PKLQF
Subjt:  VCGVHQSEPKLQF

XP_031737039.1 uncharacterized protein LOC116402129 [Cucumis sativus]1.5e-10945.19Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        MVDATTGH+ LSFMDGSSGYNQIRMALS EEMTAF T K IY YKVMPF  K V ATYQRAMQKVFDDMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD
         LRKYQLRMNPLKCAFGVTS KFLGFI                                                                     N FD
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD

Query:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV
        SIKKY    P  G+    + + +      + L ++       GKE+                                LRHYMQAF VHLVAKA+ IK+V
Subjt:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV

Query:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA
        LSRPII+G LAKWA                                   LC+D+PDDEVFFTEVMEPWTMYF GAARRSG GAGIVLIS  KHMLPYSFA
Subjt:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA

Query:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-
        L E C NNVAEYQALIIGLQ+ALEI VSFI++Y                                        EHVPRVENKR DALANLATAL MP+D 
Subjt:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-

Query:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG
                            EVN+ TS+LIDEEDWRQPIIE+LEH KLPKDS HK                               KE+SVKALKEVHAG
Subjt:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG

Query:  VCGVHQSEPKLQF
        VCG HQS PKLQF
Subjt:  VCGVHQSEPKLQF

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]4.5e-10945.02Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        MVDATTGH+ LSFMDGSSGYNQIRMALS EEMTAF T K IY YKVMPF  K   ATYQRAMQKVFDDMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD
         LRKYQLRMNPLKCAFGVTS KFLGFI                                                                     N FD
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD

Query:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV
        SIKKY    P  G+    + + +      + L ++       GKE+                                LRHYMQAF VHLVAKA+ IK+V
Subjt:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV

Query:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA
        LSRPII+G LAKWA                                   LC+D+PDDEVFFTEVMEPWTMYF GAARRSG GAGIVLIS  KHMLPYSFA
Subjt:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA

Query:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-
        L E C NNVAEYQALIIGLQ+ALEI VSFI++Y                                        EHVPRVENKR DALANLATAL MP+D 
Subjt:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-

Query:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG
                            EVN+ TS+LIDEEDWRQPIIE+LEH KLPKDS HK                               KE+SVKALKEVHAG
Subjt:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG

Query:  VCGVHQSEPKLQF
        VCG HQS PKLQF
Subjt:  VCGVHQSEPKLQF

XP_031742390.1 uncharacterized protein LOC116401672 [Cucumis sativus]4.5e-10945.02Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        MVDATTGH+ LSFMDGSSGYNQIRMALS EEMTAF T K IY YKVMPF  K   ATYQRAMQKVFDDMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD
         LRKYQLRMNPLKCAFGVTS KFLGFI                                                                     N FD
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD

Query:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV
        SIKKY    P  G+    + + +      + L ++       GKE+                                LRHYMQAF VHLVAKA+ IK+V
Subjt:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV

Query:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA
        LSRPII+G LAKWA                                   LC+D+PDDEVFFTEVMEPWTMYF GAARRSG GAGIVLIS  KHMLPYSFA
Subjt:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA

Query:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-
        L E C NNVAEYQALIIGLQ+ALEI VSFI++Y                                        EHVPRVENKR DALANLATAL MP+D 
Subjt:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-

Query:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG
                            EVN+ TS+LIDEEDWRQPIIE+LEH KLPKDS HK                               KE+SVKALKEVHAG
Subjt:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG

Query:  VCGVHQSEPKLQF
        VCG HQS PKLQF
Subjt:  VCGVHQSEPKLQF

XP_031742888.1 uncharacterized protein LOC116404510 [Cucumis sativus]2.0e-10945.19Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        MVDATTGH+ LSFMDGSSGYNQIRMALS EEMTAF T K IY YKVMPF  K   ATYQRAMQKVFDDMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD
         LRKYQLRMNPLKCAFGVTS KFLGFI                                                                     N FD
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD

Query:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV
        SIKKY    P  G+    + + +      + L ++       GKE+                                LRHYMQAF VHLVAKA+ IK+V
Subjt:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTR--GGKEKG-------------------------------LRHYMQAFIVHLVAKANTIKFV

Query:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA
        LSRPIISG LAKWA                                   LC+D+PDDEVFFTEVMEPWTMYF GAARRSG GAGIVLIS  KHMLPYSFA
Subjt:  LSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFA

Query:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-
        L E C NNVAEYQALIIGLQ+ALEI VSFI++Y                                        EHVPRVENKR DALANLATAL MP+D 
Subjt:  LVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPND-

Query:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG
                            EVN+ TS+LIDEEDWRQPIIE+LEH KLPKDS HK                               KE+SVKALKEVHAG
Subjt:  --------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVHAG

Query:  VCGVHQSEPKLQF
        VCG HQS PKLQF
Subjt:  VCGVHQSEPKLQF

TrEMBL top hitse value%identityAlignment
A0A5A7SPV8 Ribonuclease H6.1e-10443.25Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        MVDATTGH+ LSFMDGSSGYNQIRMALS EEMTAF T K IY YKV+PF  K   ATYQRAMQKVFDDMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD
         LRKYQLRMNPLKCAF VTS KFLGFI                                                                     N FD
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD

Query:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG-----------------------------------LRHYMQAFIVHLVAKANTIK
        SIKKY    P  G+    + + +      + L ++      KEKG                                   LRHYMQAF VHLVAK + IK
Subjt:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG-----------------------------------LRHYMQAFIVHLVAKANTIK

Query:  FVLSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYS
        +VLSRPIISG LAKWA                                   LCE +PDDEVFFT+++EPWTMYF GAARRSG GAGIVLIS  +HMLPYS
Subjt:  FVLSRPIISGCLAKWA-----------------------------------LCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYS

Query:  FALVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPN
        F L E CLNNVAEYQALIIGLQMALEIRVSFIKIY                                        +HVPR ENKR DALANLATALMMP+
Subjt:  FALVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPN

Query:  D---------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVH
        +                     E N+  SHLI+EEDW QPIIE+LEH KLPKDS HKT                              ++ES+KAL+E H
Subjt:  D---------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT------------------------------KEESVKALKEVH

Query:  AGVCGVHQSEPKLQF
        AGVCG HQS  KLQF
Subjt:  AGVCGVHQSEPKLQF

A0A5A7SPY4 RNase H domain-containing protein3.9e-10346.4Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        +VDATTGH+ LSFMDGSSGYNQI+M LS EEMTAF T K IY YKVMPF  K +SATYQRAMQKVF DMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI----------NDFDSIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG--------------
         LRKYQLRMNPL+C F VTS KF+ FI          +  D I+K     P   S    +++       R+ L ++      KEKG              
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI----------NDFDSIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG--------------

Query:  ---------------------LRHYMQAFIVHLVAKANTIKFVLSRPIISGCLAKWA-----------------------------------LCEDVPDD
                             LRHYMQ F VHLVAKAN IK+VLSRPIIS  LAKWA                                   LC+D+PDD
Subjt:  ---------------------LRHYMQAFIVHLVAKANTIKFVLSRPIISGCLAKWA-----------------------------------LCEDVPDD

Query:  EVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFALVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY------------------------
        EVFFTEV+EPWTMYF GAAR SG G GIVLIS  KHMLPYS AL E C NNVAEYQALIIGLQM LEI VSFI+IY                        
Subjt:  EVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFALVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY------------------------

Query:  ----------------EHVPRVENKRVDALANLATALMMPND---------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT-
                        EHVPR ENKR DALANLAT LMMPN+                     + NV TSHLIDEEDW QPIIE+LEH KL KDS HKT 
Subjt:  ----------------EHVPRVENKRVDALANLATALMMPND---------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT-

Query:  -----------------------------KEESVKALKEVHAGVCGVHQSEPKLQF
                                     KEES+KAL+E HAGVCG HQS PKLQF
Subjt:  -----------------------------KEESVKALKEVHAGVCGVHQSEPKLQF

A0A5A7UCW9 RNase H family protein1.1e-10547.48Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        MVDATT HK LSFMD SSGYNQIR  LS EEMTAF T K IY YKVMPF  K   ATYQRAMQKVFDDMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD
         L+KYQLRM PLKCAFGVTS KFLGFI                                                                     N FD
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD

Query:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG-----------------------------------LRHYMQAFIVHLVAKANTIK
        SIKKY    P  G+S   + + +      + L ++      KEKG                                   LRHYMQAF VHLVAKA+ IK
Subjt:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG-----------------------------------LRHYMQAFIVHLVAKANTIK

Query:  FVLSRPIISGCLA------KWALCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFALVEPCLNNVAEYQALIIGLQMALEIRV
          +    +    A       W L ED+P+DEVFF  V+EPWTMYF G  RRSG GAGIVLIS  KHMLPYSFAL E C NNVAEYQALIIGLQMALEI V
Subjt:  FVLSRPIISGCLA------KWALCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFALVEPCLNNVAEYQALIIGLQMALEIRV

Query:  SFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPNDEVNVKTSHLIDEEDWRQPIIEFLEHEKL
        SFI+IY                                        EHVPR  NKR DALANLATALMM ++E NV TSHLI EEDWRQPIIE+LEH KL
Subjt:  SFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPNDEVNVKTSHLIDEEDWRQPIIEFLEHEKL

Query:  PKDSHHKTKEESVKALKEVHAGVCGVHQSEPKLQF
         KDS HKTKEES+KAL+E HAGVCGVHQS PKLQF
Subjt:  PKDSHHKTKEESVKALKEVHAGVCGVHQSEPKLQF

A0A5D3DB95 RNase H domain-containing protein3.9e-10346.4Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        +VDATTGH+ LSFMDGSSGYNQI+M LS EEMTAF T K IY YKVMPF  K +SATYQRAMQKVF DMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI----------NDFDSIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG--------------
         LRKYQLRMNPL+C F VTS KF+ FI          +  D I+K     P   S    +++       R+ L ++      KEKG              
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI----------NDFDSIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG--------------

Query:  ---------------------LRHYMQAFIVHLVAKANTIKFVLSRPIISGCLAKWA-----------------------------------LCEDVPDD
                             LRHYMQ F VHLVAKAN IK+VLSRPIIS  LAKWA                                   LC+D+PDD
Subjt:  ---------------------LRHYMQAFIVHLVAKANTIKFVLSRPIISGCLAKWA-----------------------------------LCEDVPDD

Query:  EVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFALVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY------------------------
        EVFFTEV+EPWTMYF GAAR SG G GIVLIS  KHMLPYS AL E C NNVAEYQALIIGLQM LEI VSFI+IY                        
Subjt:  EVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFALVEPCLNNVAEYQALIIGLQMALEIRVSFIKIY------------------------

Query:  ----------------EHVPRVENKRVDALANLATALMMPND---------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT-
                        EHVPR ENKR DALANLAT LMMPN+                     + NV TSHLIDEEDW QPIIE+LEH KL KDS HKT 
Subjt:  ----------------EHVPRVENKRVDALANLATALMMPND---------------------EVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHKT-

Query:  -----------------------------KEESVKALKEVHAGVCGVHQSEPKLQF
                                     KEES+KAL+E HAGVCG HQS PKLQF
Subjt:  -----------------------------KEESVKALKEVHAGVCGVHQSEPKLQF

A0A5D3DKL6 RNase H family protein2.2e-10647.66Show/hide
Query:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------
        MVDATT HK LSFMD SSGYNQIR  LS EEMTAF T K IY YKVMPF  K   ATYQRAMQKVFDDMLH  V                          
Subjt:  MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVR-------------------------

Query:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD
         L+KYQLRMNPLKCAFGVTS KFLGFI                                                                     N FD
Subjt:  PLRKYQLRMNPLKCAFGVTSEKFLGFI---------------------------------------------------------------------NDFD

Query:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG-----------------------------------LRHYMQAFIVHLVAKANTIK
        SIKKY    P  G+S   + + +      + L ++      KEKG                                   LRHYMQAF VHLVAKA+ IK
Subjt:  SIKKYSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKG-----------------------------------LRHYMQAFIVHLVAKANTIK

Query:  FVLSRPIISGCLA------KWALCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFALVEPCLNNVAEYQALIIGLQMALEIRV
          +    +    A       W L ED+P+DEVFF  V+EPWTMYF G  RRSG GAGIVLIS  KHMLPYSFAL E C NNVAEYQALIIGLQMALEI V
Subjt:  FVLSRPIISGCLA------KWALCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTGAGIVLIS--KHMLPYSFALVEPCLNNVAEYQALIIGLQMALEIRV

Query:  SFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPNDEVNVKTSHLIDEEDWRQPIIEFLEHEKL
        SFI+IY                                        EHVPR  NKR DALANLATALMM ++E NV TSHLI EEDWRQPIIE+LEH KL
Subjt:  SFIKIY----------------------------------------EHVPRVENKRVDALANLATALMMPNDEVNVKTSHLIDEEDWRQPIIEFLEHEKL

Query:  PKDSHHKTKEESVKALKEVHAGVCGVHQSEPKLQF
         KDS HKTKEES+KAL+E HAGVCGVHQS PKLQF
Subjt:  PKDSHHKTKEESVKALKEVHAGVCGVHQSEPKLQF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGCAACTACTGGACACAAGCCATTGTCATTTATGGATGGGTCGTCTGGATATAATCAAATACGAATGGCCCTCTCATATGAAGAAATGACAGCTTTTAGTAC
TCTAAAGCGAATATACTATTACAAGGTGATGCCCTTTCAATTTAAAATTGTCAGTGCTACTTATCAACGTGCCATGCAGAAAGTGTTTGATGATATGTTGCATACTTGTG
TTCGACCGTTGCGAAAATATCAGCTAAGGATGAACCCTCTCAAGTGTGCGTTTGGTGTGACTTCAGAAAAGTTTCTTGGATTTATTAATGATTTTGATAGCATAAAGAAA
TACTCTGCTTACTCCCCTAGTGCTGGGAGCTCTAGTACCTGGCAAGCCATTAATATTGTACATTGCTGCACAAGAAAGGTCCTTAGGAGCATTACTGGCACAAGAGGAGG
AAAAGAGAAAGGATTGAGGCATTATATGCAAGCCTTCATTGTTCATCTAGTGGCAAAAGCAAACACTATAAAGTTTGTTCTGTCTAGGCCAATCATCTCTGGATGCTTAG
CCAAATGGGCGTTATGTGAAGACGTGCCAGACGATGAGGTTTTCTTCACGGAAGTTATGGAACCTTGGACTATGTATTTTGGTGGTGCAGCGCGAAGAAGTGGTACGGGG
GCAGGCATCGTCCTCATTTCTAAGCATATGTTGCCTTATAGCTTTGCACTTGTTGAACCGTGTTTAAACAATGTGGCTGAATATCAGGCTTTGATAATTGGCCTTCAAAT
GGCATTAGAAATCAGAGTATCATTCATAAAGATTTATGAACATGTTCCTAGAGTAGAAAATAAGAGGGTTGACGCATTGGCAAATTTAGCCACTGCTTTGATGATGCCAA
ATGATGAAGTGAACGTGAAAACATCCCATTTGATTGATGAAGAAGATTGGCGTCAACCCATCATAGAGTTTCTTGAACATGAAAAGCTTCCAAAGGATTCCCATCATAAA
ACTAAGGAAGAGTCAGTAAAAGCTCTAAAGGAAGTACATGCAGGTGTTTGTGGAGTGCATCAATCAGAACCAAAGCTTCAATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGCAACTACTGGACACAAGCCATTGTCATTTATGGATGGGTCGTCTGGATATAATCAAATACGAATGGCCCTCTCATATGAAGAAATGACAGCTTTTAGTAC
TCTAAAGCGAATATACTATTACAAGGTGATGCCCTTTCAATTTAAAATTGTCAGTGCTACTTATCAACGTGCCATGCAGAAAGTGTTTGATGATATGTTGCATACTTGTG
TTCGACCGTTGCGAAAATATCAGCTAAGGATGAACCCTCTCAAGTGTGCGTTTGGTGTGACTTCAGAAAAGTTTCTTGGATTTATTAATGATTTTGATAGCATAAAGAAA
TACTCTGCTTACTCCCCTAGTGCTGGGAGCTCTAGTACCTGGCAAGCCATTAATATTGTACATTGCTGCACAAGAAAGGTCCTTAGGAGCATTACTGGCACAAGAGGAGG
AAAAGAGAAAGGATTGAGGCATTATATGCAAGCCTTCATTGTTCATCTAGTGGCAAAAGCAAACACTATAAAGTTTGTTCTGTCTAGGCCAATCATCTCTGGATGCTTAG
CCAAATGGGCGTTATGTGAAGACGTGCCAGACGATGAGGTTTTCTTCACGGAAGTTATGGAACCTTGGACTATGTATTTTGGTGGTGCAGCGCGAAGAAGTGGTACGGGG
GCAGGCATCGTCCTCATTTCTAAGCATATGTTGCCTTATAGCTTTGCACTTGTTGAACCGTGTTTAAACAATGTGGCTGAATATCAGGCTTTGATAATTGGCCTTCAAAT
GGCATTAGAAATCAGAGTATCATTCATAAAGATTTATGAACATGTTCCTAGAGTAGAAAATAAGAGGGTTGACGCATTGGCAAATTTAGCCACTGCTTTGATGATGCCAA
ATGATGAAGTGAACGTGAAAACATCCCATTTGATTGATGAAGAAGATTGGCGTCAACCCATCATAGAGTTTCTTGAACATGAAAAGCTTCCAAAGGATTCCCATCATAAA
ACTAAGGAAGAGTCAGTAAAAGCTCTAAAGGAAGTACATGCAGGTGTTTGTGGAGTGCATCAATCAGAACCAAAGCTTCAATTCTAG
Protein sequenceShow/hide protein sequence
MVDATTGHKPLSFMDGSSGYNQIRMALSYEEMTAFSTLKRIYYYKVMPFQFKIVSATYQRAMQKVFDDMLHTCVRPLRKYQLRMNPLKCAFGVTSEKFLGFINDFDSIKK
YSAYSPSAGSSSTWQAINIVHCCTRKVLRSITGTRGGKEKGLRHYMQAFIVHLVAKANTIKFVLSRPIISGCLAKWALCEDVPDDEVFFTEVMEPWTMYFGGAARRSGTG
AGIVLISKHMLPYSFALVEPCLNNVAEYQALIIGLQMALEIRVSFIKIYEHVPRVENKRVDALANLATALMMPNDEVNVKTSHLIDEEDWRQPIIEFLEHEKLPKDSHHK
TKEESVKALKEVHAGVCGVHQSEPKLQF