; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G16950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G16950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr1:12770498..12772825
RNA-Seq ExpressionCSPI01G16950
SyntenyCSPI01G16950
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.29Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FE+LYG  P+YS LKVFG ACFVLL PHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFH SFSSPQSFFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FPLSE T   ELAQS+P +A  D  S+SD  P+  P  P RRSTRVREPP HL DYHCFSTIVSL+EPTSYQEAS +P+WQKAM++ELQALEK HTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND  AISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWLLADMGVPQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.29Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FE+LYG  P+YS LKVFG ACFVLL PHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFH SFSSPQSFFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FPLSE T   ELAQS+P +A  D  S+SD  P+  P  P RRSTRVREPP HL DYHCFSTIVSL+EPTSYQEAS +P+WQKAM++ELQALEK HTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND  AISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWLLADMGVPQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

KAA0064888.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.29Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FEKLYG  P+YS LK FG ACFVLLHPHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQ FFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FP SE  +  ELAQS+P +A  +  S+S   PE +P TP RRSTRVREPP HL DYHCFSTI+SLVEPTSYQEASINPVWQKAM++ELQALEKTHTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND QAISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQ KYASDL+ARSGITDS T+STPLD +VHLTP+DGVPLD+ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY+
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALAD TAEL+WLRWLLADMG PQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+R HLLSNTLLL+ VST EQPADIFTKALPS RF  L TKLKL ATL P
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.16Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FE+LYG  P+YS LKVFG ACFVLL PHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFH SFSSPQSFFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FPLSE T   ELAQS+P +A  D  S+SD  P+  P  P RRSTRVREPP HL DYHCFSTIVSL+EPTSYQEAS +P+WQKAM++ELQALEK HTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND  AISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWLLADMGVPQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL A+LPP
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

TYK21532.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.03Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDN+ EYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKH HILDSVRALLLSASCPEKFWGEAALTSVYTINRLPS VLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FEKLYG  P+YS LKVFG ACFVLLHPHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FPL E T D ELAQS+P +A  D  S+SD  P+ SP  P RRSTRVR PP HL DYHCFSTIVSL+EPTSYQEAS +P+WQKAM++ELQALEKTHTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQE+GIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND QAISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWLLADMGVPQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+ LLL+ VST EQPADIFTKALPS RF  +  KLKL ATLPP
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

TrEMBL top hitse value%identityAlignment
A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.29Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FE+LYG  P+YS LKVFG ACFVLL PHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFH SFSSPQSFFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FPLSE T   ELAQS+P +A  D  S+SD  P+  P  P RRSTRVREPP HL DYHCFSTIVSL+EPTSYQEAS +P+WQKAM++ELQALEK HTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND  AISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWLLADMGVPQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5A7VBA1 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.29Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FEKLYG  P+YS LK FG ACFVLLHPHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQ FFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FP SE  +  ELAQS+P +A  +  S+S   PE +P TP RRSTRVREPP HL DYHCFSTI+SLVEPTSYQEASINPVWQKAM++ELQALEKTHTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND QAISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQ KYASDL+ARSGITDS T+STPLD +VHLTP+DGVPLD+ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRY+
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALAD TAEL+WLRWLLADMG PQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+R HLLSNTLLL+ VST EQPADIFTKALPS RF  L TKLKL ATL P
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.29Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FE+LYG  P+YS LKVFG ACFVLL PHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFH SFSSPQSFFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FPLSE T   ELAQS+P +A  D  S+SD  P+  P  P RRSTRVREPP HL DYHCFSTIVSL+EPTSYQEAS +P+WQKAM++ELQALEK HTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND  AISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWLLADMGVPQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.16Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FE+LYG  P+YS LKVFG ACFVLL PHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFH SFSSPQSFFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FPLSE T   ELAQS+P +A  D  S+SD  P+  P  P RRSTRVREPP HL DYHCFSTIVSL+EPTSYQEAS +P+WQKAM++ELQALEK HTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND  AISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWLLADMGVPQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF  + TKLKL A+LPP
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5D3DD70 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.03Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        MIRTQFS PIK LRTDN+ EYKDS LLSFLSQQGT+VQRSCPH SQQNGRAERKH HILDSVRALLLSASCPEKFWGEAALTSVYTINRLPS VLQN SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL
        FEKLYG  P+YS LKVFG ACFVLLHPHEH KLEPRARLCCFLG GTEHKGFR WDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFT+TS+DL
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDL

Query:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV
        FPL E T D ELAQS+P +A  D  S+SD  P+ SP  P RRSTRVR PP HL DYHCFSTIVSL+EPTSYQEAS +P+WQKAM++ELQALEKTHTWDYV
Subjt:  FPLSEPTLDTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYV

Query:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP
        DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQE+GIDYEETFAPVARMTSVRSLLAVAAAKQWPL QMDVKNAFLNG LSEEVYMKPP GTS 
Subjt:  DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSP

Query:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV
        PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HD ALFTR T  GIVLLLLYVDDMIITGND QAISDLQ YLGQHFEMKDLGSLNYFLGLEV
Subjt:  PPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEV

Query:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
        S RSDGYLLSQAKYASDL+ARSGITDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV
Subjt:  SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYV

Query:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD
        KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSV+SRSSTESEYRALADATAEL+WLRWLLADMGVPQQGPTLLHCD
Subjt:  KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCD

Query:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        NRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+ LLL+ VST EQPADIFTKALPS RF  +  KLKL ATLPP
Subjt:  NRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.0e-11331.45Show/hide
Query:  FSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTS--PFEK
        F+  +  L  DN  EY  + +  F  ++G     + PH  Q NG +ER  R I +  R ++  A   + FWGEA LT+ Y INR+PS  L ++S  P+E 
Subjt:  FSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTS--PFEK

Query:  LYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMF-SRLSSFHTSF-----SSPQSFFTNTS
         +   P    L+VFG+  +V +  ++  K + ++    F+  G E  GF+ WD ++ +  ++R V   E  M  SR   F T F      S    F N S
Subjt:  LYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMF-SRLSSFHTSF-----SSPQSFFTNTS

Query:  VDL----FPLSEPTLDT-ELAQSSPATANLDPPSVS-----------------------------------------------------DDVPESSPATP
          +    FP      D  +  + S  + N + P+ S                                                     ++  ES  A  
Subjt:  VDL----FPLSEPTLDT-ELAQSSPATANLDPPSVS-----------------------------------------------------DDVPESSPATP

Query:  L------------------RRSTRVREPPP-------------HLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYVDLPPGKRP
        L                  RRS R++  P               L  +  F+ + +  +   Y++   +  W++A++ EL A +  +TW     P  K  
Subjt:  L------------------RRSTRVREPPP-------------HLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYVDLPPGKRP

Query:  IGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSPPPNKVCLL
        +  +W++ +K +  G   RYKARLVA+G++Q+Y IDYEETFAPVAR++S R +L++       + QMDVK AFLNG L EE+YM+ PQG S   + VC L
Subjt:  IGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSPPPNKVCLL

Query:  RRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALF--TRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRSDG
         +A+YGLKQA R WF  F   + +  F +SS D  ++   +   +  + +LLYVDD++I   D   +++ ++YL + F M DL  + +F+G+ +  + D 
Subjt:  RRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALF--TRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRSDG

Query:  YLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLG
          LSQ+ Y   ++++  + +    STPL   ++    +    D  +  R L+G L+Y+ + TRPD+  AV+I+S++ +   +  +  + R+LRY+KGT+ 
Subjt:  YLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLG

Query:  HGLQFSSQSSL--VLSGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCDNR
          L F    +    + GY D+DWAG   DR+STTGY F + D +LI W +K+Q+ ++ SSTE+EY AL +A  E +WL++LL  + +  + P  ++ DN+
Subjt:  HGLQFSSQSSL--VLSGYSDADWAGDPTDRRSTTGYCFYLGD-SLISWRSKKQSVISRSSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCDNR

Query:  SAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLI
          I IA+N   H+R KHI+   HF R  + +N + L  + T  Q ADIFTK LP+ RF  L  KL L+
Subjt:  SAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLI

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.2e-13137.39Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        ++  +    +K LR+DN  EY       + S  G   +++ P   Q NG AER +R I++ VR++L  A  P+ FWGEA  T+ Y INR PS  L    P
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLS-SFHTSFSSPQSFFTNTSVD
                  YS LKVFG   F  +   +  KL+ ++  C F+G G E  G+R WDP+  ++  SR V F E  + +    S         +F T  S  
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLS-SFHTSFSSPQSFFTNTSVD

Query:  LFPLSEPTLDTELAQ--SSPATANLDPPSVSDDVPESSPAT-------PLRRSTRVREPPPHLTDYHCFSTIVSLV----EPTSYQEASINP---VWQKA
          P S  +   E+++    P         + + V E    T       PLRRS R     P +      ST   L+    EP S +E   +P      KA
Subjt:  LFPLSEPTLDTELAQ--SSPATANLDPPSVSDDVPESSPAT-------PLRRSTRVREPPPHLTDYHCFSTIVSLV----EPTSYQEASINP---VWQKA

Query:  MDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLN
        M EE+++L+K  T+  V+LP GKRP+ CKW++K+K   D  + RYKARLV KG+ Q+ GID++E F+PV +MTS+R++L++AA+    + Q+DVK AFL+
Subjt:  MDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLN

Query:  GNLSEEVYMKPPQGTSPPPNK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNAL-FTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYL
        G+L EE+YM+ P+G      K  VC L ++LYGLKQAPR W+  F S +    +  +  D  + F R + +  ++LLLYVDDM+I G D+  I+ L+  L
Subjt:  GNLSEEVYMKPPQGTSPPPNK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNAL-FTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYL

Query:  GQHFEMKDLGSLNYFLGLEV--SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHL------TPFDGVPLDDASLYRQLVGSLIYLTV-TRPDI
         + F+MKDLG     LG+++     S    LSQ KY   ++ R  + ++   STPL  H+ L      T  +         Y   VGSL+Y  V TRPDI
Subjt:  GQHFEMKDLGSLNYFLGLEV--SHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHL------TPFDGVPLDDASLYRQLVGSLIYLTV-TRPDI

Query:  AYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALA
        A+AV +VS+F+  P   H+ AV  ILRY++GT G  L F   S  +L GY+DAD AGD  +R+S+TGY F      ISW+SK Q  ++ S+TE+EY A  
Subjt:  AYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALA

Query:  DATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRF
        +   E+IWL+  L ++G+ Q+   +++CD++SAI ++ N ++H RTKHI+   H++R  +   +L +  +ST E PAD+ TK +P N+F
Subjt:  DATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRF

P92519 Uncharacterized mitochondrial protein AtMg008101.1e-4946.88Show/hide
Query:  LLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYR
        LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KYA  ++  +G+ D    STPL   ++ +        D S +R
Subjt:  LLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYR

Query:  QLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQ
         +VG+L YLT+TRPDI+YAV+IV Q M  P    F  + R+LRYVKGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW +K+Q
Subjt:  QLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQ

Query:  SVISRSSTESEYRALADATAELIW
          +SRSSTE+EYRALA   AEL W
Subjt:  SVISRSSTESEYRALADATAELIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.3e-15238.19Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        ++  +F + I    +DN  E+    L  + SQ G     S PH  + NG +ERKHRHI+++   LL  AS P+ +W  A   +VY INRLP+ +LQ  SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTM------------------FSRLSSF
        F+KL+G SP+Y KL+VFG AC+  L P+  +KL+ ++R C FLG       +      ++RL ISRHV F E+                     S + S 
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTM------------------FSRLSSF

Query:  HTSF----------------------SSPQSFFTNTSV----------DLFPLS-EPTL----------------------------------DTELAQ-
        HT+                       SSP + F N+ V            FP S EPT                                    ++LAQ 
Subjt:  HTSF----------------------SSPQSFFTNTSV----------DLFPLS-EPTL----------------------------------DTELAQ-

Query:  -SSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPP---------------HLTDYHC----------FSTIVSLV---EPTSYQEASINPVWQKAMD
         S+PA ++   PS +     SS  +P   S  +  PPP               H                +S  VSL    EP +  +A  +  W+ AM 
Subjt:  -SSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPP---------------HLTDYHC----------FSTIVSLV---EPTSYQEASINPVWQKAMD

Query:  EELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNG
         E+ A    HTWD V  PP    I GC+WI+  K +SDG++ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L VA  + WP+ Q+DV NAFL G
Subjt:  EELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNG

Query:  NLSEEVYMKPPQG--TSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQ
         L+++VYM  P G      PN VC LR+ALYGLKQAPRAW+    + +  +GF +S  D +LF  Q    IV +L+YVDD++ITGND   + +    L Q
Subjt:  NLSEEVYMKPPQG--TSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQ

Query:  HFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM
         F +KD   L+YFLG+E      G  LSQ +Y  DL+AR+ +  +   +TP+ P   L+ + G  L D + YR +VGSL YL  TRPDI+YAV+ +SQFM
Subjt:  HFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM

Query:  AAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRW
          P   H  A+ RILRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  YLG   ISW SKKQ  + RSSTE+EYR++A+ ++E+ W+  
Subjt:  AAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIWLRW

Query:  LLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        LL ++G+    P +++CDN  A  +  N VFH R KHI  D HF+R+ + S  L +  VST +Q AD  TK L    F +  +K+  +  +PP
Subjt:  LLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.8e-14836.54Show/hide
Query:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP
        ++  +F + I  L +DN  E+   +L  +LSQ G     S PH  + NG +ERKHRHI++    LL  AS P+ +W  A   +VY INRLP+ +LQ  SP
Subjt:  MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSP

Query:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQ------SFFT
        F+KL+G  P+Y KLKVFG AC+  L P+  +KLE +++ C F+G       +      + RL  SRHV F E       ++F  S S  Q      ++ +
Subjt:  FEKLYGISPDYSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQ------SFFT

Query:  NTSVDLFPL---------------------------------------------SEPTLDTELA--------------QSSPATANLDPPSVSDDVPE--
        +T++   PL                                             SEPT  +                  +SP   N +P S S + P   
Subjt:  NTSVDLFPL---------------------------------------------SEPTLDTELA--------------QSSPATANLDPPSVSDDVPE--

Query:  --------------------SSPATPLRRSTRVREPPPHL-------------------------------TDYHCFSTIVSLVEPTSYQEASINPVWQK
                            S P +P   ST     PP L                                 Y   +++ +  EP +  +A  +  W++
Subjt:  --------------------SSPATPLRRSTRVREPPPHL-------------------------------TDYHCFSTIVSLVEPTSYQEASINPVWQK

Query:  AMDEELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAF
        AM  E+ A    HTWD V  PP    I GC+WI+  K +SDG++ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L VA  + WP+ Q+DV NAF
Subjt:  AMDEELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAF

Query:  LNGNLSEEVYMKPPQG--TSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQY
        L G L++EVYM  P G      P+ VC LR+A+YGLKQAPRAW+    + +  +GF +S  D +LF  Q    I+ +L+YVDD++ITGND   +      
Subjt:  LNGNLSEEVYMKPPQG--TSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQY

Query:  LGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVS
        L Q F +K+   L+YFLG+E      G  LSQ +Y  DL+AR+ +  +   +TP+     LT   G  L D + YR +VGSL YL  TRPD++YAV+ +S
Subjt:  LGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAVHIVS

Query:  QFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIW
        Q+M  P   H+ A+ R+LRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  YLG   ISW SKKQ  + RSSTE+EYR++A+ ++EL W
Subjt:  QFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATAELIW

Query:  LRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLP
        +  LL ++G+    P +++CDN  A  +  N VFH R KHI  D HF+R+ + S  L +  VST +Q AD  TK L    F +   K+ +I   P
Subjt:  LRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.0e-14146.21Show/hide
Query:  DTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFST---------------------------IVSLVEPTSYQEASINPVWQ
        D + + SS +   +   ++ +DVPE S  T  RR+ +    P +L DY+C S                            I    EP++Y EA    VW 
Subjt:  DTELAQSSPATANLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFST---------------------------IVSLVEPTSYQEASINPVWQ

Query:  KAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAF
         AMD+E+ A+E THTW+   LPP K+PIGCKW+YKIK +SDGTIERYKARLVAKGY+Q+ GID+ ETF+PV ++TSV+ +LA++A   + L Q+D+ NAF
Subjt:  KAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAF

Query:  LNGNLSEEVYMKPP------QGTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISD
        LNG+L EE+YMK P      QG S PPN VC L++++YGLKQA R WF  FS T+   GF  S  D+  F + T    + +L+YVDD+II  N+  A+ +
Subjt:  LNGNLSEEVYMKPP------QGTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISD

Query:  LQQYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAV
        L+  L   F+++DLG L YFLGLE++  + G  + Q KYA DL+  +G+     SS P+DP V  +   G    DA  YR+L+G L+YL +TR DI++AV
Subjt:  LQQYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLTVTRPDIAYAV

Query:  HIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATA
        + +SQF  APR  H  AV++IL Y+KGT+G GL +SSQ+ + L  +SDA +      RRST GYC +LG SLISW+SKKQ V+S+SS E+EYRAL+ AT 
Subjt:  HIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISRSSTESEYRALADATA

Query:  ELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKAL
        E++WL     ++ +P   PTLL CDN +AI IA N VFHERTKHIE+DCH VR   +    L  S    ++  D FT+ L
Subjt:  ELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKAL

ATMG00240.1 Gag-Pol-related retrotransposon family protein8.3e-1851.9Show/hide
Query:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYC
        +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L YVKGT+G GL +S+ S L L  ++D+DWA  P  RRS TG+C
Subjt:  IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein7.5e-5146.88Show/hide
Query:  LLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYR
        LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KYA  ++  +G+ D    STPL   ++ +        D S +R
Subjt:  LLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDDASLYR

Query:  QLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQ
         +VG+L YLT+TRPDI+YAV+IV Q M  P    F  + R+LRYVKGT+ HGL     S L +  + D+DWAG  + RRSTTG+C +LG ++ISW +K+Q
Subjt:  QLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQ

Query:  SVISRSSTESEYRALADATAELIW
          +SRSSTE+EYRALA   AEL W
Subjt:  SVISRSSTESEYRALADATAELIW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.5e-2250.51Show/hide
Query:  EPTSYQEASINPVWQKAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVA
        EP S   A  +P W +AM EEL AL +  TW  V  P  +  +GCKW++K K HSDGT++R KARLVAKG+ QE GI + ET++PV R  ++R++L VA
Subjt:  EPTSYQEASINPVWQKAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCGCACTCAATTTTCCTCTCCCATCAAAATTCTTCGCACTGATAATGCTTTGGAATATAAAGATTCCATCCTTCTTTCTTTTCTTTCCCAACAGGGCACTATTGT
TCAGCGCTCTTGCCCTCATATCTCTCAACAAAATGGACGTGCTGAGCGCAAACATCGTCACATTCTTGACTCAGTACGTGCCCTCCTTCTTTCTGCCTCTTGTCCAGAAA
AATTCTGGGGTGAAGCTGCCCTTACATCAGTATATACAATCAATCGTCTCCCTTCCTCTGTCCTTCAAAATACCTCTCCGTTCGAAAAACTATATGGTATTTCTCCCGAC
TATTCTAAACTCAAAGTTTTTGGTAGTGCCTGCTTCGTTCTGTTACATCCTCATGAACACAATAAACTTGAACCACGTGCCCGTCTCTGTTGCTTCCTTGGCTCTGGCAC
CGAACACAAAGGATTTCGTTATTGGGACCCTCTTTCCAACCGACTCCGGATATCTCGGCATGTCACTTTTTGGGAACACACTATGTTCTCTCGTTTGTCCTCCTTCCACA
CCTCTTTCTCTAGTCCTCAATCTTTCTTTACAAATACATCTGTTGACCTTTTTCCTCTCTCTGAACCCACCTTGGATACTGAGCTTGCACAATCTTCACCTGCTACTGCA
AATCTGGATCCACCGTCTGTCTCCGATGATGTTCCTGAATCGTCACCTGCTACTCCTCTTCGTCGCTCTACCCGGGTAAGAGAACCTCCCCCTCATCTCACTGATTACCA
TTGTTTTTCTACCATTGTTTCCCTTGTTGAACCCACCTCTTATCAAGAGGCCAGTATTAACCCAGTATGGCAGAAAGCAATGGATGAAGAATTACAGGCTCTTGAAAAGA
CGCACACTTGGGACTATGTTGATTTACCTCCCGGTAAAAGACCCATTGGTTGCAAATGGATTTACAAAATCAAAACTCACTCTGATGGAACTATTGAACGTTATAAAGCT
CGGCTTGTTGCAAAAGGATACTCACAAGAATATGGGATTGACTATGAAGAAACATTTGCCCCTGTTGCCCGGATGACATCTGTTCGCAGCTTGTTAGCTGTTGCTGCTGC
CAAACAGTGGCCTCTTTTTCAGATGGATGTCAAAAATGCATTTCTTAACGGCAACCTATCTGAAGAAGTGTATATGAAGCCACCTCAGGGAACTTCTCCTCCTCCCAACA
AGGTGTGTCTCCTTCGTCGCGCTCTATACGGTCTAAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCCACCATTACTCAACTTGGATTTACCTCCAGCTCTCAC
GACAATGCCCTTTTTACACGACAGACAACTCATGGTATTGTTCTTCTCCTTCTTTATGTTGATGATATGATTATTACTGGTAATGATCAACAGGCCATATCCGACCTACA
ACAATATCTTGGTCAACATTTTGAGATGAAAGACCTTGGATCTCTCAATTACTTTCTCGGTCTTGAAGTCTCTCACCGTTCAGATGGTTATCTGTTATCTCAAGCGAAAT
ATGCATCTGATCTAATAGCACGCTCAGGAATTACAGACTCCACCACATCTTCAACACCGTTAGATCCTCATGTCCATCTAACTCCGTTTGATGGTGTTCCTCTTGACGAT
GCAAGCTTGTATCGGCAACTTGTTGGCAGTCTTATATACCTAACAGTAACTCGCCCAGATATTGCATATGCTGTTCATATTGTCAGTCAATTTATGGCTGCTCCTCGAAC
AATTCATTTCACTGCTGTTCTACGCATACTTCGCTATGTCAAAGGCACCTTGGGACATGGTCTTCAATTCTCATCTCAGTCTTCCCTTGTGTTGTCGGGATATTCTGATG
CTGATTGGGCGGGGGATCCTACTGATCGACGATCCACTACAGGATACTGTTTTTACTTAGGTGATTCTCTCATCTCATGGCGTAGTAAGAAACAAAGTGTTATATCTCGT
TCCAGTACGGAATCTGAATATCGTGCTCTGGCTGATGCTACAGCTGAACTTATATGGCTTCGGTGGCTCCTTGCCGATATGGGTGTCCCTCAACAGGGTCCTACCCTCCT
CCATTGTGACAATCGTAGTGCCATTCAGATTGCTCACAATGATGTGTTTCATGAACGTACAAAACACATTGAAAATGACTGTCACTTTGTTCGTCACCACCTCCTAAGCA
ACACCCTCCTCTTACGTTCTGTTTCTACTATTGAACAACCTGCGGATATCTTCACCAAAGCCTTGCCATCTAATCGATTCTGTCACTTACTTACCAAACTCAAGTTGATC
GCTACTCTACCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCGCACTCAATTTTCCTCTCCCATCAAAATTCTTCGCACTGATAATGCTTTGGAATATAAAGATTCCATCCTTCTTTCTTTTCTTTCCCAACAGGGCACTATTGT
TCAGCGCTCTTGCCCTCATATCTCTCAACAAAATGGACGTGCTGAGCGCAAACATCGTCACATTCTTGACTCAGTACGTGCCCTCCTTCTTTCTGCCTCTTGTCCAGAAA
AATTCTGGGGTGAAGCTGCCCTTACATCAGTATATACAATCAATCGTCTCCCTTCCTCTGTCCTTCAAAATACCTCTCCGTTCGAAAAACTATATGGTATTTCTCCCGAC
TATTCTAAACTCAAAGTTTTTGGTAGTGCCTGCTTCGTTCTGTTACATCCTCATGAACACAATAAACTTGAACCACGTGCCCGTCTCTGTTGCTTCCTTGGCTCTGGCAC
CGAACACAAAGGATTTCGTTATTGGGACCCTCTTTCCAACCGACTCCGGATATCTCGGCATGTCACTTTTTGGGAACACACTATGTTCTCTCGTTTGTCCTCCTTCCACA
CCTCTTTCTCTAGTCCTCAATCTTTCTTTACAAATACATCTGTTGACCTTTTTCCTCTCTCTGAACCCACCTTGGATACTGAGCTTGCACAATCTTCACCTGCTACTGCA
AATCTGGATCCACCGTCTGTCTCCGATGATGTTCCTGAATCGTCACCTGCTACTCCTCTTCGTCGCTCTACCCGGGTAAGAGAACCTCCCCCTCATCTCACTGATTACCA
TTGTTTTTCTACCATTGTTTCCCTTGTTGAACCCACCTCTTATCAAGAGGCCAGTATTAACCCAGTATGGCAGAAAGCAATGGATGAAGAATTACAGGCTCTTGAAAAGA
CGCACACTTGGGACTATGTTGATTTACCTCCCGGTAAAAGACCCATTGGTTGCAAATGGATTTACAAAATCAAAACTCACTCTGATGGAACTATTGAACGTTATAAAGCT
CGGCTTGTTGCAAAAGGATACTCACAAGAATATGGGATTGACTATGAAGAAACATTTGCCCCTGTTGCCCGGATGACATCTGTTCGCAGCTTGTTAGCTGTTGCTGCTGC
CAAACAGTGGCCTCTTTTTCAGATGGATGTCAAAAATGCATTTCTTAACGGCAACCTATCTGAAGAAGTGTATATGAAGCCACCTCAGGGAACTTCTCCTCCTCCCAACA
AGGTGTGTCTCCTTCGTCGCGCTCTATACGGTCTAAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCCACCATTACTCAACTTGGATTTACCTCCAGCTCTCAC
GACAATGCCCTTTTTACACGACAGACAACTCATGGTATTGTTCTTCTCCTTCTTTATGTTGATGATATGATTATTACTGGTAATGATCAACAGGCCATATCCGACCTACA
ACAATATCTTGGTCAACATTTTGAGATGAAAGACCTTGGATCTCTCAATTACTTTCTCGGTCTTGAAGTCTCTCACCGTTCAGATGGTTATCTGTTATCTCAAGCGAAAT
ATGCATCTGATCTAATAGCACGCTCAGGAATTACAGACTCCACCACATCTTCAACACCGTTAGATCCTCATGTCCATCTAACTCCGTTTGATGGTGTTCCTCTTGACGAT
GCAAGCTTGTATCGGCAACTTGTTGGCAGTCTTATATACCTAACAGTAACTCGCCCAGATATTGCATATGCTGTTCATATTGTCAGTCAATTTATGGCTGCTCCTCGAAC
AATTCATTTCACTGCTGTTCTACGCATACTTCGCTATGTCAAAGGCACCTTGGGACATGGTCTTCAATTCTCATCTCAGTCTTCCCTTGTGTTGTCGGGATATTCTGATG
CTGATTGGGCGGGGGATCCTACTGATCGACGATCCACTACAGGATACTGTTTTTACTTAGGTGATTCTCTCATCTCATGGCGTAGTAAGAAACAAAGTGTTATATCTCGT
TCCAGTACGGAATCTGAATATCGTGCTCTGGCTGATGCTACAGCTGAACTTATATGGCTTCGGTGGCTCCTTGCCGATATGGGTGTCCCTCAACAGGGTCCTACCCTCCT
CCATTGTGACAATCGTAGTGCCATTCAGATTGCTCACAATGATGTGTTTCATGAACGTACAAAACACATTGAAAATGACTGTCACTTTGTTCGTCACCACCTCCTAAGCA
ACACCCTCCTCTTACGTTCTGTTTCTACTATTGAACAACCTGCGGATATCTTCACCAAAGCCTTGCCATCTAATCGATTCTGTCACTTACTTACCAAACTCAAGTTGATC
GCTACTCTACCACCTTGA
Protein sequenceShow/hide protein sequence
MIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHISQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNTSPFEKLYGISPD
YSKLKVFGSACFVLLHPHEHNKLEPRARLCCFLGSGTEHKGFRYWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQSFFTNTSVDLFPLSEPTLDTELAQSSPATA
NLDPPSVSDDVPESSPATPLRRSTRVREPPPHLTDYHCFSTIVSLVEPTSYQEASINPVWQKAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKA
RLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLFQMDVKNAFLNGNLSEEVYMKPPQGTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSH
DNALFTRQTTHGIVLLLLYVDDMIITGNDQQAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRSDGYLLSQAKYASDLIARSGITDSTTSSTPLDPHVHLTPFDGVPLDD
ASLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVISR
SSTESEYRALADATAELIWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLI
ATLPP