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CSPI01G17020 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17020
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:12839587..12839916
RNA-Seq ExpressionCSPI01G17020
SyntenyCSPI01G17020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050063.1 hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa]1.8e-4086.24Show/hide
Query:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI
        MATSAITKLPL+LLVCIAILASSVTARPT  AA  P  +DFSLFPCISFVP AT  VIDVLKNAV+PHPSCCEAIS+LHDCSSQFLKDI S DMILVKSI
Subjt:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI

Query:  CASWGVSIS
        CASWGVSIS
Subjt:  CASWGVSIS

KAA0050065.1 hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa]3.6e-3377.36Show/hide
Query:  SAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSICAS
        ++ TKLPL LL CI ILASSV ARP   AA  P   D SLFPC SFVPKAT CVIDVLKNAV+PHPSCC+AIS+LHDCSSQFLKDI S DMILVKSICA 
Subjt:  SAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSICAS

Query:  WGVSIS
        WGVSIS
Subjt:  WGVSIS

KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]7.1e-4287.16Show/hide
Query:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI
        MATSAITKLPLVL VCIAILASSVTA PT  AA  P+ EDFSLFPCISFVPKAT CVIDVLKN V+PHPSCCEAI++LHDCSSQFLKDI SGDMILVKSI
Subjt:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI

Query:  CASWGVSIS
        CASWGVSIS
Subjt:  CASWGVSIS

TYK10343.1 hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa]2.1e-3377.36Show/hide
Query:  SAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSICAS
        ++ TKLPL LL CI ILASSV ARP   AA  P + D SLFPC SFVPKAT CVIDVLKNAV+PHPSCC+AIS+LHDCSSQFLKDI S DMILVKSICA 
Subjt:  SAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSICAS

Query:  WGVSIS
        WGVSIS
Subjt:  WGVSIS

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]1.3e-4389.91Show/hide
Query:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI
        MATSAITKLPLVLLVCIAILASSVTARPT  AA  P+ EDFSLFPCISFVPKAT CVIDVLKNAV+PHPSCCEAIS+LHDCSSQFLKDI S DMILVKSI
Subjt:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI

Query:  CASWGVSIS
        CASWGVSIS
Subjt:  CASWGVSIS

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein8.5e-4186.24Show/hide
Query:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI
        MATSAITKLPL+LLVCIAILASSVTARPT  AA  P  +DFSLFPCISFVP AT  VIDVLKNAV+PHPSCCEAIS+LHDCSSQFLKDI S DMILVKSI
Subjt:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI

Query:  CASWGVSIS
        CASWGVSIS
Subjt:  CASWGVSIS

A0A5A7U8Y3 Uncharacterized protein1.7e-3377.36Show/hide
Query:  SAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSICAS
        ++ TKLPL LL CI ILASSV ARP   AA  P   D SLFPC SFVPKAT CVIDVLKNAV+PHPSCC+AIS+LHDCSSQFLKDI S DMILVKSICA 
Subjt:  SAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSICAS

Query:  WGVSIS
        WGVSIS
Subjt:  WGVSIS

A0A5A7U9B0 Uncharacterized protein3.5e-4287.16Show/hide
Query:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI
        MATSAITKLPLVL VCIAILASSVTA PT  AA  P+ EDFSLFPCISFVPKAT CVIDVLKN V+PHPSCCEAI++LHDCSSQFLKDI SGDMILVKSI
Subjt:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI

Query:  CASWGVSIS
        CASWGVSIS
Subjt:  CASWGVSIS

A0A5D3CEQ4 Uncharacterized protein1.0e-3377.36Show/hide
Query:  SAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSICAS
        ++ TKLPL LL CI ILASSV ARP   AA  P + D SLFPC SFVPKAT CVIDVLKNAV+PHPSCC+AIS+LHDCSSQFLKDI S DMILVKSICA 
Subjt:  SAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSICAS

Query:  WGVSIS
        WGVSIS
Subjt:  WGVSIS

A0A5D3CFS6 Uncharacterized protein6.3e-4489.91Show/hide
Query:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI
        MATSAITKLPLVLLVCIAILASSVTARPT  AA  P+ EDFSLFPCISFVPKAT CVIDVLKNAV+PHPSCCEAIS+LHDCSSQFLKDI S DMILVKSI
Subjt:  MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSI

Query:  CASWGVSIS
        CASWGVSIS
Subjt:  CASWGVSIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACATCAGCAATAACCAAGTTACCACTAGTTCTCCTAGTGTGCATTGCCATTTTAGCATCATCCGTAACGGCTCGTCCAACAGCAGCAGCAGCAACACCCCCATC
GTTGGAAGATTTCTCTTTGTTTCCTTGCATATCATTCGTTCCTAAGGCAACAATATGTGTGATTGATGTGCTTAAAAATGCAGTTTCTCCTCATCCTTCATGTTGTGAAG
CCATCTCTAAACTTCATGATTGTTCGTCCCAATTTCTCAAAGACATTTCCTCCGGTGATATGATTTTGGTTAAGAGCATTTGTGCTTCATGGGGAGTTTCTATTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACATCAGCAATAACCAAGTTACCACTAGTTCTCCTAGTGTGCATTGCCATTTTAGCATCATCCGTAACGGCTCGTCCAACAGCAGCAGCAGCAACACCCCCATC
GTTGGAAGATTTCTCTTTGTTTCCTTGCATATCATTCGTTCCTAAGGCAACAATATGTGTGATTGATGTGCTTAAAAATGCAGTTTCTCCTCATCCTTCATGTTGTGAAG
CCATCTCTAAACTTCATGATTGTTCGTCCCAATTTCTCAAAGACATTTCCTCCGGTGATATGATTTTGGTTAAGAGCATTTGTGCTTCATGGGGAGTTTCTATTTCTTAG
Protein sequenceShow/hide protein sequence
MATSAITKLPLVLLVCIAILASSVTARPTAAAATPPSLEDFSLFPCISFVPKATICVIDVLKNAVSPHPSCCEAISKLHDCSSQFLKDISSGDMILVKSICASWGVSIS