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CSPI01G17070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:12860243..12860817
RNA-Seq ExpressionCSPI01G17070
SyntenyCSPI01G17070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]1.7e-2153.4Show/hide
Query:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE
        +AS+KLP++F VC+AILA+  +  T      D F+ + ++ + CT F  EATKC+IDVMKN++ PHPSCC+A  KLNDC+PE  K +PS D  LIK IC 
Subjt:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE

Query:  LWG
        LWG
Subjt:  LWG

KAA0050080.1 hypothetical protein E6C27_scaffold675G00640 [Cucumis melo var. makuwa]2.3e-4285.29Show/hide
Query:  MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL
        M AS+K+P+IFLVCIAIL LPVM RT TTLDQF  KD ASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPE YKDVPS DK+L+KKIC L
Subjt:  MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL

Query:  WG
        WG
Subjt:  WG

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]1.0e-2154.37Show/hide
Query:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE
        +AS+KLP++FLVCIAILA+  M  T      D F+ ++ + + CT F  EAT CM+DVMKN++ PHPSCC+A  KLNDC+ E  K +PS D  LIK IC 
Subjt:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE

Query:  LWG
        LWG
Subjt:  LWG

KGN65195.1 hypothetical protein Csa_019746 [Cucumis sativus]5.2e-50100Show/hide
Query:  MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL
        MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL
Subjt:  MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL

Query:  WGA
        WGA
Subjt:  WGA

TYK10330.1 hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]7.8e-2253.4Show/hide
Query:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE
        +AS+KLP++F VC+AILA+  +  T      D F+ ++++ + CT F  EATKC+IDVMKN++ PHPSCC+A  KLNDC+PE  K +PS D  LIK IC 
Subjt:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE

Query:  LWG
        LWG
Subjt:  LWG

TrEMBL top hitse value%identityAlignment
A0A0A0LTE1 Uncharacterized protein2.5e-50100Show/hide
Query:  MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL
        MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL
Subjt:  MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL

Query:  WGA
        WGA
Subjt:  WGA

A0A5A7U471 Uncharacterized protein1.1e-4285.29Show/hide
Query:  MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL
        M AS+K+P+IFLVCIAIL LPVM RT TTLDQF  KD ASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPE YKDVPS DK+L+KKIC L
Subjt:  MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICEL

Query:  WG
        WG
Subjt:  WG

A0A5A7U483 Uncharacterized protein8.4e-2253.4Show/hide
Query:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE
        +AS+KLP++F VC+AILA+  +  T      D F+ + ++ + CT F  EATKC+IDVMKN++ PHPSCC+A  KLNDC+PE  K +PS D  LIK IC 
Subjt:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE

Query:  LWG
        LWG
Subjt:  LWG

A0A5D3CFS6 Uncharacterized protein4.8e-1749.5Show/hide
Query:  ASLKLPIIFLVCIAILALPVMTRTTTTLDQFST-KDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICELW
        A  KLP++ LVCIAILA  V  R T       T +D +   C  F  +ATKC+IDV+KN++ PHPSCC AI +L+DC+ +  KD+PS+D  L+K IC  W
Subjt:  ASLKLPIIFLVCIAILALPVMTRTTTTLDQFST-KDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICELW

Query:  G
        G
Subjt:  G

A0A5D3CG41 Uncharacterized protein3.8e-2253.4Show/hide
Query:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE
        +AS+KLP++F VC+AILA+  +  T      D F+ ++++ + CT F  EATKC+IDVMKN++ PHPSCC+A  KLNDC+PE  K +PS D  LIK IC 
Subjt:  VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICE

Query:  LWG
        LWG
Subjt:  LWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGCCTCATTGAAGCTACCAATCATATTCCTAGTTTGCATAGCCATTTTAGCATTACCTGTGATGACACGAACCACGACAACGCTTGATCAGTTCTCAACCAAGGA
TGTCGCATCGGTGAACTGCACGGTGTTTACTTTCGAGGCAACAAAATGTATGATTGATGTGATGAAGAATTCAATGCCTCCTCATCCGTCATGTTGCAGAGCCATTCTTA
AGCTTAACGACTGTAATCCCGAGGTTTACAAAGATGTTCCTTCTACTGACAAGAAATTAATTAAGAAGATTTGTGAGTTGTGGGGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ACACACAGCTTCCCCCCATATCTAATTCAAATCCTTCTCTTAACCATCAATTGAAATCATGGTCGCCTCATTGAAGCTACCAATCATATTCCTAGTTTGCATAGCCATTT
TAGCATTACCTGTGATGACACGAACCACGACAACGCTTGATCAGTTCTCAACCAAGGATGTCGCATCGGTGAACTGCACGGTGTTTACTTTCGAGGCAACAAAATGTATG
ATTGATGTGATGAAGAATTCAATGCCTCCTCATCCGTCATGTTGCAGAGCCATTCTTAAGCTTAACGACTGTAATCCCGAGGTTTACAAAGATGTTCCTTCTACTGACAA
GAAATTAATTAAGAAGATTTGTGAGTTGTGGGGTGCTTGATCCAATTCTTATGCTAAAGGTTGTTTAATTGAGTTAATTGGATCGTAATGAATAAGAGAAAATTATCATT
TTGTTACTTACATTAGTAGTATTTTATAAATTTAAGGAAGAGTGGATTTTGTTTCCATTTGAAATATGAGAACTAGTATTTGTTTTTCTTTTTACTTTTGTCAAAGGCCA
TTTAATTTTGATCTTTATTTTTCTT
Protein sequenceShow/hide protein sequence
MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKNSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICELWGA