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CSPI01G17140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSerine-rich protein-related
Genome locationChr1:12901422..12902184
RNA-Seq ExpressionCSPI01G17140
SyntenyCSPI01G17140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653030.1 hypothetical protein Csa_019924 [Cucumis sativus]1.0e-43100Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSR
        MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSR
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSR

XP_008443918.1 PREDICTED: uncharacterized protein LOC103487396 [Cucumis melo]3.2e-4283.64Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM
        MASKSGSSTHKFP+   SRKCLCSPTTHPGSFRCSFHR RHKISS+RSSSS       A+LELAKANALR+FLLQMIKPSSND+QRRRNFHPRPSRFCLM
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM

Query:  NDHATGLAVS
        NDH TGL VS
Subjt:  NDHATGLAVS

XP_022921799.1 uncharacterized protein LOC111429944 [Cucurbita moschata]3.8e-3575.22Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLE---LAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF
        MASKSGSS  K  + G SRKCLCSPTTHPGSFRCS HRNR K+ S+RSSSSS++ ITTA L+   LAKANALRSFL Q+I PSS DLQRRRNF P+PSRF
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLE---LAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF

Query:  CLMNDHATGLAVS
        CLMN+H TGLAVS
Subjt:  CLMNDHATGLAVS

XP_022927032.1 uncharacterized protein LOC111433980 [Cucurbita moschata]5.0e-3574.34Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF
        MA+KS S   K  + G+SRKCLCSPTTHPGSFRCSFHRNR K +S+RSSSSS++ IT+A LEL   AKANA+R+FLL +I+PSSNDLQRRRNFHPRPSRF
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF

Query:  CLMNDHATGLAVS
        CLMN H TGLAVS
Subjt:  CLMNDHATGLAVS

XP_023515429.1 uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]7.7e-3676.11Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLE---LAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF
        MASKSGSS  K  + G SRKCLCSPTTHPGSFRCS HRNR K+ S+RSSSSS++ ITTA L+   LAKANALRSFLLQ+I PSS DLQRRRNF P+PSRF
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLE---LAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF

Query:  CLMNDHATGLAVS
        CLMN+H TGLAVS
Subjt:  CLMNDHATGLAVS

TrEMBL top hitse value%identityAlignment
A0A0A0LYY6 Uncharacterized protein2.6e-53100Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM
        MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM

Query:  NDHATGLAVS
        NDHATGLAVS
Subjt:  NDHATGLAVS

A0A1S3B8Q0 uncharacterized protein LOC1034873961.6e-4283.64Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM
        MASKSGSSTHKFP+   SRKCLCSPTTHPGSFRCSFHR RHKISS+RSSSS       A+LELAKANALR+FLLQMIKPSSND+QRRRNFHPRPSRFCLM
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM

Query:  NDHATGLAVS
        NDH TGL VS
Subjt:  NDHATGLAVS

A0A5A7U6S1 Serine-rich protein-related1.6e-4283.64Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM
        MASKSGSSTHKFP+   SRKCLCSPTTHPGSFRCSFHR RHKISS+RSSSS       A+LELAKANALR+FLLQMIKPSSND+QRRRNFHPRPSRFCLM
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM

Query:  NDHATGLAVS
        NDH TGL VS
Subjt:  NDHATGLAVS

A0A6J1E1K3 uncharacterized protein LOC1114299441.9e-3575.22Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLE---LAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF
        MASKSGSS  K  + G SRKCLCSPTTHPGSFRCS HRNR K+ S+RSSSSS++ ITTA L+   LAKANALRSFL Q+I PSS DLQRRRNF P+PSRF
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLE---LAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF

Query:  CLMNDHATGLAVS
        CLMN+H TGLAVS
Subjt:  CLMNDHATGLAVS

A0A6J1EG01 uncharacterized protein LOC1114339802.4e-3574.34Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF
        MA+KS S   K  + G+SRKCLCSPTTHPGSFRCSFHRNR K +S+RSSSSS++ IT+A LEL   AKANA+R+FLL +I+PSSNDLQRRRNFHPRPSRF
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF

Query:  CLMNDHATGLAVS
        CLMN H TGLAVS
Subjt:  CLMNDHATGLAVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13227.1 serine-rich protein-related2.0e-0542.11Show/hide
Query:  GSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSS--SSLSLITTAD
        G S     ++   + CLC+PTTHPGSFRC +HR    +  SR +S  S+LS++   D
Subjt:  GSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSS--SSLSLITTAD

AT5G11090.1 serine-rich protein-related2.7e-1039.13Show/hide
Query:  SRKCLCSPTTHPGSFRCSFHR---NRHKISSSRSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM
        SR+C+CSPTTHPGSFRCS H+   N H   ++  +++ L++  +A       +   +   +R  L  +I+PSS+ L+RR  + PRPSR  +M
Subjt:  SRKCLCSPTTHPGSFRCSFHR---NRHKISSSRSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLM

AT5G20370.1 serine-rich protein-related5.0e-0939.47Show/hide
Query:  SSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTAD-----------LELAKANAL------------RSFLLQMIKPSSND
        SS H+       RKCLCSPTTHPGSFRCSFHR      S   +SS++      D            +LA  N+L            RS    + KPSS  
Subjt:  SSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTAD-----------LELAKANAL------------RSFLLQMIKPSSND

Query:  LQRRRNFHPRPSRF
          RR  F PR SRF
Subjt:  LQRRRNFHPRPSRF

AT5G25280.1 serine-rich protein-related1.0e-0935.45Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHR---NRHKISSSRSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFH
        ++S   S+ HK P   + R+C+CSPTTHPGSFRCS H+   N H   ++  +++ L++  +A       +   +   +R  L  +I+PSS+ L+RR  + 
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHR---NRHKISSSRSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFH

Query:  PRPSRFCLMN
        PR SR   M+
Subjt:  PRPSRFCLMN

AT5G25280.2 serine-rich protein-related1.0e-0935.45Show/hide
Query:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHR---NRHKISSSRSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFH
        ++S   S+ HK P   + R+C+CSPTTHPGSFRCS H+   N H   ++  +++ L++  +A       +   +   +R  L  +I+PSS+ L+RR  + 
Subjt:  MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHR---NRHKISSSRSSSSSLSLITTA------DLELAKANALRSFLLQMIKPSSNDLQRRRNFH

Query:  PRPSRFCLMN
        PR SR   M+
Subjt:  PRPSRFCLMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCA
CCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGC
TCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGGTTTTGTTTGATGAACGATCATGCAACTGGATTGGCTGTTTCT
TGA
mRNA sequenceShow/hide mRNA sequence
GTTCCACAAGTTTTCCCTAAAAATCAGTCCACAAATAATAATCACTCCCACATTTTCAAATTCAATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACG
GCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCC
CTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAA
TTTTCATCCTCGACCTTCCAGGTTTTGTTTGATGAACGATCATGCAACTGGATTGGCTGTTTCTTGAATTCCCCCTTTTTTTTAGTTGCTTAATCAGTCGTTTGTACGTG
TAGTAGATCTGGATGTCTGTTTTTGTTCCTGATTTCGATCTTCTTCCTTCGCTGAATTTCCAGATGAGTTTGTAGATATAGTACTCTGTTTGTGTACAGATTATTTCGAG
ACGACATTGGATCTTGACGATTCTACAAGTCTTTCTTGAAATATAATTAGTGTTTTTTTTCTTTCTCTCTTTCATTTCTTTTGCATCTTTTCCTCTGTTTCTTCTTCTCT
GATTCTTGCAACTGGCAAATGCAAGCGAAGTCGTAATAAACGGATGATGATTCATTACATCTTGAAATGTTTTCTTGATTTCTTTATCAAGAACTTCCACAAA
Protein sequenceShow/hide protein sequence
MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNDHATGLAVS