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CSPI01G17250 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17250
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr1:12982688..12984369
RNA-Seq ExpressionCSPI01G17250
SyntenyCSPI01G17250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050039.1 putative E3 ubiquitin-protein ligase RHY1A [Cucumis melo var. makuwa]3.0e-5590.98Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDK GQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC
XP_004146704.1 uncharacterized protein LOC101215379 [Cucumis sativus]1.5e-67100Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
        RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
Subjt:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
XP_008443904.1 PREDICTED: uncharacterized protein LOC103487385 isoform X1 [Cucumis melo]2.1e-5691.8Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC
XP_008443905.1 PREDICTED: uncharacterized protein LOC103487385 isoform X2 [Cucumis melo]8.8e-5591.8Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC
XP_038876903.1 uncharacterized protein LOC120069257 [Benincasa hispida]5.1e-4781.97Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN +WSDSP IAAQ LTRRSVLCLYTSN+E+LL SNPS++R LL+EA  ++ELDG AREAKRRLD+R LRTQRKSED GREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSW KLNW GVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC
TrEMBL top hitse value%identityAlignment
A0A0A0LWJ8 Uncharacterized protein7.4e-68100Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
        RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
Subjt:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
A0A1S3B9W3 uncharacterized protein LOC103487385 isoform X11.0e-5691.8Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC
A0A1S3B9Y1 uncharacterized protein LOC103487385 isoform X24.2e-5591.8Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC
A0A5A7U973 Putative E3 ubiquitin-protein ligase RHY1A1.5e-5590.98Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDK GQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC
A0A6J1E765 uncharacterized protein LOC111430042 isoform X21.6e-4174.59Show/hide
Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN +WSDSP IAAQ LTRRSVLCLYTSN+E LL SNPS+ER LL+EA+ +D+LDG AREAKRRLDER LRTQRKS        
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
         RK +W KLNW GVE+DKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15580.1 RING/U-box superfamily protein1.3e-1140.87Show/hide
Query:  MAGTLPGVECARRRRCH------QNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGED---ELDGIAREAKRRLDERLL---RT
        MAG LPGVECARRRR H      ++S  +     A  V TRR    LYT+N+E+        ER +  ++ GED   +LDG A+EAK+RL++RL    RT
Subjt:  MAGTLPGVECARRRRCH------QNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGED---ELDGIAREAKRRLDERLL---RT

Query:  QRKSEDNGREMMRRK
        ++  +D G ++ + K
Subjt:  QRKSEDNGREMMRRK
AT2G15580.2 RING/U-box superfamily protein4.8e-1140.17Show/hide
Query:  MAGTLPGVECARRRRCH------QNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGED---ELDGIAREAKRRLDERLLRTQRK
        MAG LPGVECARRRR H      ++S  +     A  V TRR    LYT+N+E+        ER +  ++ GED   +LDG A+EAK+RL++RL    R 
Subjt:  MAGTLPGVECARRRRCH------QNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGED---ELDGIAREAKRRLDERLLRTQRK

Query:  SEDNGREMMRRKFSWRK
        S  +G+ +  +  +W K
Subjt:  SEDNGREMMRRKFSWRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAACACTTCCTGGTGTAGAATGTGCTCGAAGAAGACGTTGTCATCAAAACAGTATATGGTCAGATTCACCGCTAATCGCCGCTCAGGTTTTAACTAGGAGATC
CGTTCTCTGCTTGTACACAAGTAACAACGAAGCGCTCCTCTTTTCAAATCCATCTATGGAGAGACGTTTGTTAATGGAGGCAGAGGGAGAAGATGAACTGGATGGAATTG
CGAGAGAAGCGAAGAGGAGATTGGATGAGCGATTGTTGAGAACGCAGAGGAAATCAGAAGATAATGGAAGAGAGATGATGAGGAGAAAATTCAGTTGGAGAAAGTTGAAT
TGGATTGGCGTCGAAGAAGATAAGTGCGGTCAATGCCTGGTGAAGAAGACGACTTGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
TGAGACGTGAGTAGAATACTCATAATTTGGTACTAAAGAACTAATGGAAAGAGAGTTCAATATTCTTCTTTCCGGTGGGGCTAACTAAATTTACTCTAATCTGGTAAGTT
TCTTGGAACCTTCCCATCTCCATCCTTGCATTTTCTTCCTTCTCCTTCCAATCATCGAACCACCAAATTCTTATAAATCAACCATTACTTTTTTAGTAGAAAGAAAACCA
TATAATCAAATCAGACGCCACAAAGAAAAGCCCTAGATCTGTGCCGAAATTTCAATTTTCAAACTTCCGTAAGTTTCTCCAATGGCCGGAACACTTCCTGGTGTAGAATG
TGCTCGAAGAAGACGTTGTCATCAAAACAGTATATGGTCAGATTCACCGCTAATCGCCGCTCAGGTTTTAACTAGGAGATCCGTTCTCTGCTTGTACACAAGTAACAACG
AAGCGCTCCTCTTTTCAAATCCATCTATGGAGAGACGTTTGTTAATGGAGGCAGAGGGAGAAGATGAACTGGATGGAATTGCGAGAGAAGCGAAGAGGAGATTGGATGAG
CGATTGTTGAGAACGCAGAGGAAATCAGAAGATAATGGAAGAGAGATGATGAGGAGAAAATTCAGTTGGAGAAAGTTGAATTGGATTGGCGTCGAAGAAGATAAGTGCGG
TCAATGCCTGGTGAAGAAGACGACTTGGAGTTGATTTTCAGTGAGTTTGTTCTTCATCTTCATCATGATTGGGGGTGGGAATGTAATTTTAGTTAGCTGTTTGTAATTTA
ACAATTTAAACCCAAACAAATGTAGGATTTTGAATAATTGAAAAAAATACTCTCCAATATAAATGATTGAATAACAAAATATTGAGGGATGAGGGAACTTTGGATCTATG
ATACATGTTTGTTTGAGTTATGGTTGTTTGGACATTAAATATATTTTCATTGGACATTAATAAGTTTTAAGACAAGAAGTTGAGGTTTGAGTTTGCTCATACCAAAACAA
ATATCCAATTGGTTAAAAGAGAAAGAAAAATTACATTTGCATCTACTCGCATATCTAGAAAATTTTATTGATGTGGATGAGAGATAATCTTACCATTGGACTAACTTTTG
AATTTGATGTTATTTTAGATTTTTGTACATAATAATATAAAAGGCATAAAGTTTGAAGGCTAGAGCCTCCCAAAGCTATACAAAATCAGTCTAATCTACGAGTGTTTGCA
TTAAGTTGTGATAGGAAAGATAATTAGATTAGTGTGGAAACAAAAATTGTTTCTCTCCTTCCACGTTATAAAGAAGAAAAAGAAAGAAAAATCAAATACATCCATGTTAT
CTTCGAAATGGATGATGACCGATTAGAGTATATGTGATGAGGCTGCCAATATCCTTATGTATTAGTATGGCCATAAGTGCAAATGAAGCAACAATGGGGAGAAGAGAACT
ATGGTGGGTGACATGGTAGGTAAGGTTAAAATCTGATTTTGGTCTTTAAACTTTGTA
Protein sequenceShow/hide protein sequence
MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMMRRKFSWRKLN
WIGVEEDKCGQCLVKKTTWS