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CSPI01G17280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:13008053..13008751
RNA-Seq ExpressionCSPI01G17280
SyntenyCSPI01G17280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050036.1 hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa]1.3e-3480.95Show/hide
Query:  MEKMGG-VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPS----SSRQFVNSESPPPPLHFVYQ
        MEKMGG VGS VFDGSLS+Q FLIERRPYHRNCGCALHDDR RNGAACSHA+K KNSVSFLKTQKCP TSL IL S    SSRQFVNSESP     FV Q
Subjt:  MEKMGG-VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPS----SSRQFVNSESPPPPLHFVYQ

Query:  FSTSS
        FSTSS
Subjt:  FSTSS

KAG6587851.1 hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1053.33Show/hide
Query:  MGG--VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPPPPLH
        MGG  +G  VFDGS+S++ FLIERRPYHRNCGCALH  R++NG  C HAL S  SVSFLK +K   T    + + S +F    +P   LH
Subjt:  MGG--VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPPPPLH

KGN65216.1 hypothetical protein Csa_019753 [Cucumis sativus]2.5e-4999Show/hide
Query:  MEKMGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPPPPLHFVYQFSTSS
        MEKMGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSL ILPSSSRQFVNSESPPPPLHFVYQFSTSS
Subjt:  MEKMGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPPPPLHFVYQFSTSS

XP_023531631.1 uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo]1.7e-1049.47Show/hide
Query:  MGG--VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKT-----------SLHILPSSSRQFVNSES
        MGG  +G  VFDGS+S+  FLIERRPYHRNCGCALH  R +NG  C HAL +  SVSFLK +K   T           S H  P+S    ++S++
Subjt:  MGG--VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKT-----------SLHILPSSSRQFVNSES

XP_023531633.1 uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo]6.6e-1052.22Show/hide
Query:  MGG--VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPPPPLH
        MGG  +G  VFDGS+S+  FLIERRPYHRNCGCALH  R +NG  C HAL +  SVSFLK +K   T    + + S +F    +P   LH
Subjt:  MGG--VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPPPPLH

TrEMBL top hitse value%identityAlignment
A0A0A0LZ02 Uncharacterized protein1.2e-4999Show/hide
Query:  MEKMGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPPPPLHFVYQFSTSS
        MEKMGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSL ILPSSSRQFVNSESPPPPLHFVYQFSTSS
Subjt:  MEKMGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPPPPLHFVYQFSTSS

A0A2P6RIH6 Uncharacterized protein7.4e-0743.37Show/hide
Query:  GGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPP
        G +  RVF+GSLS+Q   IERRPYH+NC CALH  +     ACS A   + ++SF K Q     SL +  ++S+    S +PP
Subjt:  GGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPP

A0A445A3M3 Uncharacterized protein1.3e-0640.74Show/hide
Query:  GVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESP
        G+   +F+GS+S     +ERRPYHRNC CALH      G AC+H L   N++S+   +   + SL I+ +SS     S SP
Subjt:  GVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESP

A0A5A7U781 Uncharacterized protein6.4e-3580.95Show/hide
Query:  MEKMGG-VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPS----SSRQFVNSESPPPPLHFVYQ
        MEKMGG VGS VFDGSLS+Q FLIERRPYHRNCGCALHDDR RNGAACSHA+K KNSVSFLKTQKCP TSL IL S    SSRQFVNSESP     FV Q
Subjt:  MEKMGG-VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPS----SSRQFVNSESPPPPLHFVYQ

Query:  FSTSS
        FSTSS
Subjt:  FSTSS

A0A7J7D6U8 Uncharacterized protein2.1e-0644.59Show/hide
Query:  VFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPS--SSRQFVN
        VFDGS+S+Q   IERRPYHRNCGCALH+ +      C+++   + ++SF K Q    ++  I  S  SSR  +N
Subjt:  VFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPS--SSRQFVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46490.1 unknown protein3.6e-0657.58Show/hide
Query:  GVGSRVFDGSLSLQSFLIERRPYHRNCGCALHD
        G+   +F+G +S     IERRPYH+NCGCALHD
Subjt:  GVGSRVFDGSLSLQSFLIERRPYHRNCGCALHD

AT5G35110.1 unknown protein1.5e-0734.88Show/hide
Query:  MGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKC----PKTSLHILPSSSRQFVNSES
        M G+   +F+G +S     I+RRPYH+NCGCALH +R R G + +     ++ V     Q+        +LH+  SSS   + S S
Subjt:  MGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKC----PKTSLHILPSSSRQFVNSES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGATGGGAGGAGTTGGATCACGTGTGTTTGATGGAAGCTTATCATTGCAAAGCTTTTTGATTGAACGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACA
CGATGATCGGATTAGAAACGGAGCTGCTTGCTCTCATGCTTTGAAATCCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAAAAACTTCTCTCCATATTCTTC
CTTCCTCTTCTCGTCAATTTGTTAACTCCGAATCTCCTCCTCCTCCTCTTCATTTTGTTTACCAATTTTCAACATCTTCATAG
mRNA sequenceShow/hide mRNA sequence
TCCCACACAACTCCTCAACCCATCCAATTTGGACATTCAAATTTCATATATTCATCCTTTGCTCTGTTTTCAAGAACAAGGAAACAGAGGAAGAATGGAGAAGATGGGAG
GAGTTGGATCACGTGTGTTTGATGGAAGCTTATCATTGCAAAGCTTTTTGATTGAACGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGATTAGA
AACGGAGCTGCTTGCTCTCATGCTTTGAAATCCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAAAAACTTCTCTCCATATTCTTCCTTCCTCTTCTCGTCA
ATTTGTTAACTCCGAATCTCCTCCTCCTCCTCTTCATTTTGTTTACCAATTTTCAACATCTTCATAGAATTAGTAATTGTTTTTTCTTTTCTTTTCTTTAATGTTTTTAA
TGTGTTTTGAGATCGTCTTCTCTGTTTTTGTTCCTTTTCTTGTTGTACTCTTCAGCTGCTTGTTATGTACAAATGGGAATGGAACTTATCTTGACAAGGAAAGGCAAGGT
CTTTTCTTGCTGAGAGTTTGTGTAGTTCGATTATTATTAGTGTAATATTAATATGAAATCAACGGAGATTTGAATGGTGCAGCATTAATGTTCTTCTAAGAAAAAAAAAA
TACCTCTGAGTACCACATATCTTTGTGTATCTAATCACC
Protein sequenceShow/hide protein sequence
MEKMGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFLKTQKCPKTSLHILPSSSRQFVNSESPPPPLHFVYQFSTSS