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CSPI01G17290 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17290
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionZinc finger, SWIM-type
Genome locationChr1:13011852..13012513
RNA-Seq ExpressionCSPI01G17290
SyntenyCSPI01G17290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY31322.1 Uncharacterized protein TCM_038276 [Theobroma cacao]7.7e-2159.34Show/hide
Query:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLGSYK
        AD L R +Y GCI   D  I+RRPYH+NCSCALHD+    C H+  K K+VSYPIRRAWSEGCLAM AAS  SSP SSP+   V   G ++
Subjt:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLGSYK

KAE8653037.1 hypothetical protein Csa_019637 [Cucumis sativus]2.1e-4296.59Show/hide
Query:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSPSSPSMDQVESLG
        MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSPSSPSMDQ+E +G
Subjt:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSPSSPSMDQVESLG

KAG6587850.1 hypothetical protein SDJN03_16415, partial [Cucurbita argyrosperma subsp. sororia]5.3e-3074.47Show/hide
Query:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAA--SGISSPSSPSMDQVESLGSYKR
        MADAL   VY+GCI + DAEI RRPYHKNC CALHDRDN+RCSHSMSKH +VSYPIRRAWSEGCLAM AA  SGISSPSS    + E LGS +R
Subjt:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAA--SGISSPSSPSMDQVESLGSYKR

XP_007013703.2 PREDICTED: uncharacterized protein LOC18588916 [Theobroma cacao]7.7e-2159.34Show/hide
Query:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLGSYK
        AD L R +Y GCI   D  I+RRPYH+NCSCALHD+    C H+  K K+VSYPIRRAWSEGCLAM AAS  SSP SSP+   V   G ++
Subjt:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLGSYK

XP_008443899.1 PREDICTED: uncharacterized protein LOC103487382 [Cucumis melo]1.5e-4088.42Show/hide
Query:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMV---AASGISSPSSPSMDQVESLGSYKR
        MADA LRCVY+GCI  PDA IDRRPYHKNCSCALHDRDN+RCSHS+SKHKSVSYPIRRAWSEGCLAMV   AASG+SSPSSPSMDQVESLGSYKR
Subjt:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMV---AASGISSPSSPSMDQVESLGSYKR

TrEMBL top hitse value%identityAlignment
A0A061GQ94 Uncharacterized protein3.7e-2159.34Show/hide
Query:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLGSYK
        AD L R +Y GCI   D  I+RRPYH+NCSCALHD+    C H+  K K+VSYPIRRAWSEGCLAM AAS  SSP SSP+   V   G ++
Subjt:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLGSYK

A0A0A0LWK0 Uncharacterized protein4.4e-46100Show/hide
Query:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSPSSPSMDQVESLGSYKR
        MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSPSSPSMDQVESLGSYKR
Subjt:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSPSSPSMDQVESLGSYKR

A0A1S3B9X6 uncharacterized protein LOC1034873827.2e-4188.42Show/hide
Query:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMV---AASGISSPSSPSMDQVESLGSYKR
        MADA LRCVY+GCI  PDA IDRRPYHKNCSCALHDRDN+RCSHS+SKHKSVSYPIRRAWSEGCLAMV   AASG+SSPSSPSMDQVESLGSYKR
Subjt:  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMV---AASGISSPSSPSMDQVESLGSYKR

A0A6J0ZQ85 uncharacterized protein LOC1104112423.1e-2058.24Show/hide
Query:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLGSYK
        AD L R +Y GCI   D  I+RRPYH+NC CALHD+    C H+  K K+VSYPIRRAWSEGCLAM AAS  SSP SSP+   V   G ++
Subjt:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLGSYK

A0A6P5ZAR1 uncharacterized protein LOC1112990022.4e-2060.23Show/hide
Query:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLG
        AD L R +Y GCI   D  I+RRPYH+NC CALHD+    C H+  K K+VSYPIRRAWSEGCLAM AAS  SSP SSP++  V   G
Subjt:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSP-SSPSMDQVESLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46490.1 unknown protein9.7e-1444.9Show/hide
Query:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDR-------DNKRCSHSMSKH---KSVSYPIRRAWSEGCLAMVAASGISSPSSPSMDQVESLGS
        AD + R ++ GCI   D+ I+RRPYHKNC CALHD+        N+R   S  +H   +S+S+PIRR+WSEG   ++A +  SS SS S   ++SL S
Subjt:  ADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDR-------DNKRCSHSMSKH---KSVSYPIRRAWSEGCLAMVAASGISSPSSPSMDQVESLGS

AT5G35110.1 unknown protein4.8e-1342.86Show/hide
Query:  DALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKH---KSVSYPIRRAWSEG-CLAMVAASGISSPSSPSMDQVESLGS
        D + R ++ GCI S D+ I RRPYHKNC CALH+R     S +  +H   + V +PI+R+WSEG  LA+  AS  SS +  S+    S+ +
Subjt:  DALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKH---KSVSYPIRRAWSEG-CLAMVAASGISSPSSPSMDQVESLGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACGCCTTACTCAGATGCGTCTACTACGGCTGCATCGTTAGCCCCGACGCCGAGATCGACCGCCGTCCTTACCATAAGAACTGCAGCTGCGCGCTTCACGACCG
AGATAATAAACGCTGTTCTCATTCCATGTCTAAACATAAGTCCGTCTCGTACCCGATCAGACGAGCCTGGAGTGAGGGATGTTTGGCTATGGTTGCTGCTTCTGGCATTT
CTTCTCCTTCTTCGCCGTCCATGGATCAGGTTGAAAGCCTTGGATCTTACAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
CAAAAGGCCAATTGGCATCACATGGCAAGGCGGCAAGCAGCAAAGTAGGCCAACTCCCAACGCACAAACTTATACACACATCACACGGATCCCACATCGCTTAATTCTCC
CTTTTCCAGTATCCCGACAACTGTCTTCTCTTCAACCACCTCCCCTTTAATTTCCTCACTCCCTATATAAACCCCTTCTTCTCCATTCCCCTTCTTTCCCTCAACCCCCC
TCCGGCATCGGCCACTCCCTACGCTCTTCTCCATGGCCGACGCCTTACTCAGATGCGTCTACTACGGCTGCATCGTTAGCCCCGACGCCGAGATCGACCGCCGTCCTTAC
CATAAGAACTGCAGCTGCGCGCTTCACGACCGAGATAATAAACGCTGTTCTCATTCCATGTCTAAACATAAGTCCGTCTCGTACCCGATCAGACGAGCCTGGAGTGAGGG
ATGTTTGGCTATGGTTGCTGCTTCTGGCATTTCTTCTCCTTCTTCGCCGTCCATGGATCAGGTTGAAAGCCTTGGATCTTACAAGAGATGAGCCGTATTATTGTTTTGAT
TTTTGTTTTTTATTTCTTGTTTTGTTAAAAATCTAATTTGATTTTAGTTTTGTAATATATATATATGTGGAATTCTTTTCTTTGGTTAGTGGAATTCTTTTCTTTGGTTA
GT
Protein sequenceShow/hide protein sequence
MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAWSEGCLAMVAASGISSPSSPSMDQVESLGSYKR