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CSPI01G17490 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17490
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:13142370..13143712
RNA-Seq ExpressionCSPI01G17490
SyntenyCSPI01G17490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653046.1 hypothetical protein Csa_020077 [Cucumis sativus]7.2e-11891.29Show/hide
Query:  AGINVKSRSGQRRSPGEDDEDKLVAISSSC---------------------AEVGKEGVEGLIVNQVNGIQFIAKSEKGRIVDDRFSAECYFDLNPKFDL
        AGINVKSRSGQRRSPGEDDEDKLVAISSSC                     AEVGKEGVEGLIVNQVNGIQFIAKSEKGRIVDDRFSAECYFDLNPKFDL
Subjt:  AGINVKSRSGQRRSPGEDDEDKLVAISSSC---------------------AEVGKEGVEGLIVNQVNGIQFIAKSEKGRIVDDRFSAECYFDLNPKFDL

Query:  PWQYSTLVEKQNLIAQQTHQGNQLNSCKIKEIWKGGPWASLAEVGKEGAEGLIVNQANGIQFIAKSEKGRKVDDRFSAECYFDLNPKSDLPWQYSTLVEK
        PWQYSTLVEKQNLIAQQTHQGNQLNSCKIKEIWKGGPWASLAEVGKEGAEGLIVNQANGIQFIAKSEKGRKVDDRFSAECYFDLNPKSDLPWQYSTLVEK
Subjt:  PWQYSTLVEKQNLIAQQTHQGNQLNSCKIKEIWKGGPWASLAEVGKEGAEGLIVNQANGIQFIAKSEKGRKVDDRFSAECYFDLNPKSDLPWQYSTLVEK

Query:  QNLIAQQTHQEREAKEKEDSLVEEHGYGEGTKGGWITFQLS
        QNLIAQQTHQEREAKEKEDSLVEEHGYGEGTKGGWITFQLS
Subjt:  QNLIAQQTHQEREAKEKEDSLVEEHGYGEGTKGGWITFQLS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGATCGGTGGTGGTTCAGTGGCTGAGATGGCAAAGAAAACGGGGAAAAAAGGTTCAGCCATTGCAAGATTCAAGGGAGGAGCAAAGAAAAAATGATGAAGA
TGACGATCAGGGGCGTTGGCATGAGACGATGAATAAACGAAGAGAAGTAAAGTGGCAGACAAAGAATTGGAGAAGAGATGAGGAAGGATCAGCAGGGATCAACGTGAAGT
CTCGAAGTGGCCAAAGAAGAAGTCCGGGAGAAGACGACGAAGACAAGTTGGTTGCAATTAGTTCCTCCTGTGCAGAAGTTGGCAAAGAAGGTGTTGAGGGTCTAATTGTA
AATCAAGTAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAATAGTTGATGATAGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCCAAATTTGACTTGCC
ATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGGAAACCAACTCAATTCATGTAAAATCAAAGAAATATGGAAAGGAGGGCCTT
GGGCTTCTTTGGCAGAAGTTGGCAAAGAAGGTGCTGAGGGTCTAATTGTAAATCAAGCAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAAAAGTTGATGAT
AGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCAAAATCTGACTTGCCATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGA
AAGAGAAGCCAAAGAGAAAGAAGACAGTCTAGTAGAAGAGCATGGGTACGGCGAAGGAACAAAGGGAGGGTGGATAACTTTCCAACTATCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAGATCGGTGGTGGTTCAGTGGCTGAGATGGCAAAGAAAACGGGGAAAAAAGGTTCAGCCATTGCAAGATTCAAGGGAGGAGCAAAGAAAAAATGATGAAGA
TGACGATCAGGGGCGTTGGCATGAGACGATGAATAAACGAAGAGAAGTAAAGTGGCAGACAAAGAATTGGAGAAGAGATGAGGAAGGATCAGCAGGGATCAACGTGAAGT
CTCGAAGTGGCCAAAGAAGAAGTCCGGGAGAAGACGACGAAGACAAGTTGGTTGCAATTAGTTCCTCCTGTGCAGAAGTTGGCAAAGAAGGTGTTGAGGGTCTAATTGTA
AATCAAGTAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAATAGTTGATGATAGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCCAAATTTGACTTGCC
ATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGGAAACCAACTCAATTCATGTAAAATCAAAGAAATATGGAAAGGAGGGCCTT
GGGCTTCTTTGGCAGAAGTTGGCAAAGAAGGTGCTGAGGGTCTAATTGTAAATCAAGCAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAAAAGTTGATGAT
AGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCAAAATCTGACTTGCCATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGA
AAGAGAAGCCAAAGAGAAAGAAGACAGTCTAGTAGAAGAGCATGGGTACGGCGAAGGAACAAAGGGAGGGTGGATAACTTTCCAACTATCGTAG
Protein sequenceShow/hide protein sequence
MKKRSVVVQWLRWQRKRGKKVQPLQDSREEQRKNDEDDDQGRWHETMNKRREVKWQTKNWRRDEEGSAGINVKSRSGQRRSPGEDDEDKLVAISSSCAEVGKEGVEGLIV
NQVNGIQFIAKSEKGRIVDDRFSAECYFDLNPKFDLPWQYSTLVEKQNLIAQQTHQGNQLNSCKIKEIWKGGPWASLAEVGKEGAEGLIVNQANGIQFIAKSEKGRKVDD
RFSAECYFDLNPKSDLPWQYSTLVEKQNLIAQQTHQEREAKEKEDSLVEEHGYGEGTKGGWITFQLS