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CSPI01G17550 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17550
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCytochrome c oxidase, subunit Vib family protein
Genome locationChr1:13192447..13193492
RNA-Seq ExpressionCSPI01G17550
SyntenyCSPI01G17550
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443871.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]1.7e-5797.37Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA EADSSGGSDEVHTDVL ESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADY KLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN
XP_011655945.1 uncharacterized protein LOC101212489 isoform X1 [Cucumis sativus]2.0e-5898.25Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MAFEADSSGGSDEVHTDVL ESRQACYKARDAFYAC+EKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN
XP_022134674.1 uncharacterized protein LOC111006886 [Momordica charantia]2.1e-5289.47Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA EAD+SGG DEVH+DVL  SRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PL LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN
XP_022973432.1 cytochrome c oxidase assembly factor 6 [Cucurbita maxima]2.7e-5287.72Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA E D SGGS+EVHTDVL E RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN
XP_038878579.1 uncharacterized protein LOC120070767 [Benincasa hispida]6.5e-5492.11Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA EAD+SGG DEVH+DVL ESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA + KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN
TrEMBL top hitse value%identityAlignment
A0A0A0LTX1 Uncharacterized protein9.5e-5998.25Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MAFEADSSGGSDEVHTDVL ESRQACYKARDAFYAC+EKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN
A0A1S3B9T5 uncharacterized protein LOC103487365 isoform X18.0e-5897.37Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA EADSSGGSDEVHTDVL ESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADY KLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN
A0A5A7SVN2 Cytochrome c oxidase assembly factor 6 isoform X38.0e-5897.37Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA EADSSGGSDEVHTDVL ESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADY KLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PLILPQPYTFKPTN
Subjt:  PLILPQPYTFKPTN
A0A6J1BZF0 uncharacterized protein LOC1110068861.0e-5289.47Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA EAD+SGG DEVH+DVL  SRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PL LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN
A0A6J1I7I2 cytochrome c oxidase assembly factor 61.3e-5287.72Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA E D SGGS+EVHTDVL E RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPTN
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G58005.1 Cytochrome c oxidase, subunit Vib family protein1.4e-4165.49Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA +  +S   ++VH DVLL++R ACYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R  +   CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT
AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein1.4e-4165.49Show/hide
Query:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG
        MA +  +S   ++VH DVLL++R ACYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R  +   CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCGAAGCTGACTCATCTGGAGGCTCCGATGAAGTTCATACCGACGTTCTATTGGAATCAAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTGT
GGAGAAGGAATCTGATAAAAAACCTACTGAAATTGCTTCTGTTGGCCTTATTTACCCTGCCGAGTGTAAAGCTTTGAGAGCTGATTATGCCAAACTTTGCAGAGCTTCTT
GGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCCTAGATGACAAAGATTTGAGGAGAGGTCCGTTGATACTTCCTCAGCCTTACACTTTT
AAGCCCACTAATTAA
mRNA sequenceShow/hide mRNA sequence
GAAAGAGACCAAGAAACCATAGCATCTCCGTCTTCGCAGGAACTATGGCTTTCGAAGCTGACTCATCTGGAGGCTCCGATGAAGTTCATACCGACGTTCTATTGGAATCA
AGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTGTGGAGAAGGAATCTGATAAAAAACCTACTGAAATTGCTTCTGTTGGCCTTATTTACCCTGCCGAGTG
TAAAGCTTTGAGAGCTGATTATGCCAAACTTTGCAGAGCTTCTTGGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCCTAGATGACAAAG
ATTTGAGGAGAGGTCCGTTGATACTTCCTCAGCCTTACACTTTTAAGCCCACTAATTAAACTAAACACAATCCCTCCGGATCAACATTGGGCGGTCAGAGTCTCATCACT
ATTGATATTTTGTATTTGTTGTTTTTGCTTCTTCTTCTTTTACTATGTATAGAAATGACTGTGGAAATAGATTTAGTAATAATGTCCATCTTCTTGCCAGACTACAAAAC
CTTAATACCCTTTTTGGGCATGTAATTTTAAGGTATGATTTAGAATTAAATTTACCTTCACCTATTGACTTAGGCTTTTGGGTGAAGGCAAATTTAATAGAATATCTAAC
ACTCCCCCTGATAGAACACTTTTACCCACAATCTTAAGTTTGTGTGACTGTTCTTCATATTTCAAATCCACAAGTGAGGGGAGTGTTAGATGATATATAATTAAATTTAC
CTTTCACCCATTAGCTTAAGCTTTTAGCTCAATCAGTGATTTAAGAGGTAGTTCTAACTTCTTGCATGACCGTGATGTAAAAACTAAAGATACAAGACCCTAACACTTGT
AATTTCGTTATCTAATAAAAAATCACTTCGTTATTTGGACGCTTTATTAGTTTGTAGAAGTAATATTTTGAATTCTTGGCTGCAT
Protein sequenceShow/hide protein sequence
MAFEADSSGGSDEVHTDVLLESRQACYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRADYAKLCRASWVKHFDRKFCQNSRVQRLLDDKDLRRGPLILPQPYTF
KPTN