CuGenDBv2

Gene ID	CSPI01G17680
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Eukaryotic translation initiation factor 5A
Genome location	Chr1:13315340..13319014
RNA-Seq Expression	CSPI01G17680
Synteny	CSPI01G17680
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0045901 - positive regulation of translational elongation (biological process) GO:0045905 - positive regulation of translational termination (biological process) GO:0003743 - translation initiation factor activity (molecular function) GO:0003746 - translation elongation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function)
InterPro domains	IPR001884 - Translation elongation factor IF5A-like IPR008991 - Translation protein SH3-like domain superfamily IPR012340 - Nucleic acid-binding, OB-fold IPR014722 - Ribosomal protein L2, domain 2 IPR019769 - Translation elongation factor, IF5A, hypusine site IPR020189 - Translation elongation factor, IF5A C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146682.1 eukaryotic translation initiation factor 5A-2 [Cucumis sativus]

6.3e-87

100

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
        FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

XP_007011943.1 PREDICTED: eukaryotic translation initiation factor 5A [Theobroma cacao]

1.7e-84

96.25

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
        FVSLLTENGNTKDDLRLPTD+NLL+Q+KDGFAEGKDLV+TVMSAMGEEQICALKDIGPKN
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

XP_008443857.1 PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo]

6.9e-86

98.75

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
        FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

XP_022135162.1 eukaryotic translation initiation factor 5A-2-like [Momordica charantia]

4.1e-86

98.75

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
        FVSLLTENGNTKDDL+LPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

XP_022930431.1 eukaryotic translation initiation factor 5A-2-like [Cucurbita moschata]

1.2e-85

99.37

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
        FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTB3 Eukaryotic translation initiation factor 5A

3.0e-87

100

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
        FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

A0A1S3B9T8 Eukaryotic translation initiation factor 5A

3.3e-86

98.75

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
        FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

A0A5A7T0H1 Eukaryotic translation initiation factor 5A

3.3e-86

98.75

Show/hide

Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
        FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK+
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

A0A6J1C1W6 Eukaryotic translation initiation factor 5A

2.0e-86

98.75

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
        FVSLLTENGNTKDDL+LPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

A0A6J1I076 Eukaryotic translation initiation factor 5A

5.7e-86

99.37

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
        FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK

SwissProt top hits

e value

%identity

Alignment

P24922 Eukaryotic translation initiation factor 5A-2

8.8e-84

93.71

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEH F+SKADAGASKT+PQQAG IRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFVAIDIF GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
        FVSLLTENGNTKDDLRLPTDDNLLTQ+KDGFAEGKDLV++VMSAMGEEQICALKDIGPK
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK

P56337 Eukaryotic translation initiation factor 5A-5

4.4e-83

92.45

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKT+PQQAG IRK+G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
        FVSLLTENGNTKDDLRLPTDD LL Q+KDGFAEGKDLVL+VMSAMGEEQIC +KDIGPK
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK

P69039 Eukaryotic translation initiation factor 5A-1

1.5e-83

92.45

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKT+PQQAG IRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
        FVSLLTENGNTKDDLRLPTDDNLL  +KDGFAEGKDLVL+VMSAMGEEQIC +KD+GPK
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK

P69040 Eukaryotic translation initiation factor 5A-1

1.5e-83

92.45

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKT+PQQAG IRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
        FVSLLTENGNTKDDLRLPTDDNLL  +KDGFAEGKDLVL+VMSAMGEEQIC +KD+GPK
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK

Q9AXJ4 Eukaryotic translation initiation factor 5A

1.4e-84

92.5

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+SKADAGASKTFPQQAG IRKNGYIVIKNRPCKV+EVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN
        FVSLLTE GNTKDDLRLPTD+NLL+Q+KDGFAEGKDLV++VMSAMGEE+IC+LKDIGPKN
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

Arabidopsis top hits

e value

%identity

Alignment

AT1G13950.1 eukaryotic elongation factor 5A-1

1.6e-77

86.79

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSDEEHHF+S +DAGASKT+PQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF  KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
        +VSLLT+NG+TKDDL+LP DD LL Q+K GF +GKDLV++VMSAMGEEQI ALKDIGPK
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK

AT1G26630.1 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein

1.1e-70

78.34

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSD+EHHF++ +++GASKT+PQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF  KKLEDIVPSSHNCDVPHVNR DYQLIDI+EDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIG
        FVSLLT++G TKDDL+LPTDD L  Q++ GF EGKD+V++VMS+MGEEQICA+K++G
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIG

AT1G26630.2 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein

1.4e-57

81.89

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSD+EHHF++ +++GASKT+PQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF  KKLEDIVPSSHNCDVPHVNR DYQLIDI+EDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQL
        FVSLLT++G TKDDL+LPTDD L  QL
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQL

AT1G69410.1 eukaryotic elongation factor 5A-3

2.4e-76

84.28

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Query:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
        MSD+EHHF+S +DAGASKT+PQQAG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFVAIDIF  KKLEDIVPSSHNCDVPHVNR DYQLIDISEDG
Subjt:  MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG

Query:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
        FVSLLT+NG+TKDDL+LPTD+ LLTQLK+GF EGKD+V++VMSAMGEEQ+CALK++GPK
Subjt:  FVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCGGACGAGGAGCACCACTTCGACTCCAAGGCCGACGCCGGAGCTTCCAAGACTTTTCCTCAGCAGGCTGGAGCCATTCGCAAAAATGGCTACATCGTAATCAAGAA
CAGACCCTGCAAGGTAGTTGAAGTTTCTACTTCAAAAACTGGCAAACATGGGCATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGGAAGAAACTTGAAGATA
TTGTTCCTTCTTCTCACAACTGTGATGTTCCCCATGTTAATCGCACCGATTATCAGCTGATCGACATATCTGAGGATGGTTTTGTCAGTCTCCTTACTGAAAATGGAAAC
ACCAAGGATGACCTGAGGCTTCCCACCGATGATAACCTGCTTACGCAGCTTAAAGATGGGTTCGCTGAAGGCAAAGATCTCGTACTAACTGTCATGTCTGCAATGGGAGA
AGAGCAGATCTGTGCTCTCAAGGACATTGGTCCTAAAAATTAA

mRNA sequence

Show/hide mRNA sequence

AGTAAAATCGAGTAATTGCCATTTTCATTCGTAAGGTTTAAATTGAATGGAAATATATGCTTTTATTCTCTTTGAGGAAGAAAAGAAAAAGAGGAGTTGAAAAAGCAGTT
AGAAAACGGCGATGGGATTGCGGGAACGACTAATCCAACGGTCACGATTTCATCTCTCTCAATTGGAGACTTGGGCCTCTGAAAAGCCTACAGGAATATTATAGCCGATC
ACTTCGTCGTCTACAACGTCTTCAGAGACGGAACATTCACAACTGTGTGTGAAACCAAAAATAGGGAAACGCCGGTGCAGCGATGTCGGACGAGGAGCACCACTTCGACT
CCAAGGCCGACGCCGGAGCTTCCAAGACTTTTCCTCAGCAGGCTGGAGCCATTCGCAAAAATGGCTACATCGTAATCAAGAACAGACCCTGCAAGGTAGTTGAAGTTTCT
ACTTCAAAAACTGGCAAACATGGGCATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGGAAGAAACTTGAAGATATTGTTCCTTCTTCTCACAACTGTGATGT
TCCCCATGTTAATCGCACCGATTATCAGCTGATCGACATATCTGAGGATGGTTTTGTCAGTCTCCTTACTGAAAATGGAAACACCAAGGATGACCTGAGGCTTCCCACCG
ATGATAACCTGCTTACGCAGCTTAAAGATGGGTTCGCTGAAGGCAAAGATCTCGTACTAACTGTCATGTCTGCAATGGGAGAAGAGCAGATCTGTGCTCTCAAGGACATT
GGTCCTAAAAATTAAATACAGGGCTACGGCTACACCTGACGATGGCTCAGCGTCATCAGGAGTCCTATCAAGTATATGCTTATATGTAATAAAAACATATTATCAGCTGT
GAAATTAAAAGCTTAAACATCCATGAAGCTTCTTTCAATGGGAAAATATTATAGGAAATGTTGAACCTGCTGATATCCTTGCAACTCTGATGAAAGGATTACATACATTT
CACTCTTCTTTTATATAGTACAATACTTATAAAATCGGTTATCCTCTCGTTTTCTGTCATTTGAATACCCTTGTGAATTGCCTTAGATGTTGGATTCTGCTCATTCAAAA
CAGTTGTGCTGTTCATTGGGCCACTCTCTCCTTTTTCTTTTGTACAAAGGCTTGTTATTCCGAAAATCTTTCAACAGAGAAGGTTGAACCAACTCTAATTTCCTACATAC
TATATGTATCTTTGAAAGTTGTCCACCCGAATTTGCCGCCTTGGTTAGAAAGGAATGAATCTCAACCAATGCAAAGAGAAGGGAGTGCTTGAAGGCCATTTAAGCTGATC
TTGATTGAGTGGCTGTTGTTTCCTAGAACCAAAAGTGCAAAGGCTTGGCCCAACTGATATGATGGCTTTATAATTATTGTCTTAAAGGCC

Protein sequence

Show/hide protein sequence

MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGN
TKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN

CSPI01G17680 (gene) of Cucumber (PI 183967) v1 genome