; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G17790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein
Genome locationChr1:13371544..13372302
RNA-Seq ExpressionCSPI01G17790
SyntenyCSPI01G17790
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653057.1 hypothetical protein Csa_020016 [Cucumis sativus]4.4e-5899.16Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSW VIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATV
        IWSLSSFLMRFFPSTAATV
Subjt:  IWSLSSFLMRFFPSTAATV

XP_011648473.2 F-box protein At3g07870 [Cucumis sativus]4.4e-5899.16Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSW VIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATV
        IWSLSSFLMRFFPSTAATV
Subjt:  IWSLSSFLMRFFPSTAATV

XP_011656390.2 uncharacterized protein LOC105435726 [Cucumis sativus]9.6e-5393.28Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASA LAPYLVGIVVQFAFEQYAR KKSCSW VI IVFQVYRLHQLN  AQLVT LSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATV
        IWSLSSFLMRFFPS AATV
Subjt:  IWSLSSFLMRFFPSTAATV

XP_038879012.1 uncharacterized protein LOC120071064 isoform X1 [Benincasa hispida]8.1e-5291.67Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASA LAPYLVGIVVQFAFEQYAR KKS SW VI IVFQVYRLHQLN  AQLVT LSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATVH
        IWSLSSFLMRFFPS  ATVH
Subjt:  IWSLSSFLMRFFPSTAATVH

XP_038879013.1 uncharacterized protein LOC120071064 isoform X2 [Benincasa hispida]8.1e-5291.67Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASA LAPYLVGIVVQFAFEQYAR KKS SW VI IVFQVYRLHQLN  AQLVT LSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATVH
        IWSLSSFLMRFFPS  ATVH
Subjt:  IWSLSSFLMRFFPSTAATVH

TrEMBL top hitse value%identityAlignment
A0A0A0LS19 Uncharacterized protein3.8e-5594.96Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASA LAPYLVGIVVQFAFEQYARCKKSCSW VIQIVFQVYRLHQLN  AQLVT LSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATV
        IWSLSSFLMRFFPS AATV
Subjt:  IWSLSSFLMRFFPSTAATV

A0A0A0LYV4 Uncharacterized protein1.4e-7898.68Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSW VIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATVHRIERFQNILLYNSKLKCMLIWEFVDDVMIKGE
        IWSLSSFLMRFFPS AATVHRIERFQNILLYNSKLKCMLIWEFVDDVMIKGE
Subjt:  IWSLSSFLMRFFPSTAATVHRIERFQNILLYNSKLKCMLIWEFVDDVMIKGE

A0A1S3CLW8 uncharacterized protein LOC1035024006.7e-5292.44Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASA LAPYLVGIVVQFAFEQYAR KKS SW VI IVFQVYRLHQLN  AQLVT LSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATV
        IWSLSSFLMRFFPS AATV
Subjt:  IWSLSSFLMRFFPSTAATV

A0A5D3BHC7 Uncharacterized protein5.1e-5290.91Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASA LAPYLVGIVVQFAFEQYAR KKS SW VI IVFQVYRLHQLN  AQLVT LSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATVHR
        IWSLSSFLMRFFPS AAT +R
Subjt:  IWSLSSFLMRFFPSTAATVHR

A0A6J1E2A7 uncharacterized protein LOC1114301321.4e-4989.92Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MGLVWPWTGPAASA LAPYLVGIVVQFAFEQYAR K+S SW VI IVFQVYRLHQLN  AQLVT LSFTIKGAEMTPNNLAINSSLGTLLNVLQ LGIIC
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLMRFFPSTAATV
        IWSLSSFLMRFFPS AAT+
Subjt:  IWSLSSFLMRFFPSTAATV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48460.1 unknown protein1.4e-1439.29Show/hide
Query:  LVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIICIW
        + WP  G  A   + P+LVG  VQ  FE     + S  W ++ IVF+VYRL+Q+   A  V  L F +K A  T        +L  L+  LQ L ++C+W
Subjt:  LVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIICIW

Query:  SLSSFLMRFFPS
        S  +FLMR FPS
Subjt:  SLSSFLMRFFPS

AT5G63040.1 unknown protein5.3e-4177.98Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MG VWPWTGPAASA LAPYLVGIVVQFAFEQYAR + S S  +I I+FQVYRLHQLN  AQLVT LSFT+KGAE T NNLAI  SLGTLLNV+Q LG+I 
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLM
        IWS+SSFLM
Subjt:  IWSLSSFLM

AT5G63040.2 unknown protein5.3e-4177.98Show/hide
Query:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC
        MG VWPWTGPAASA LAPYLVGIVVQFAFEQYAR + S S  +I I+FQVYRLHQLN  AQLVT LSFT+KGAE T NNLAI  SLGTLLNV+Q LG+I 
Subjt:  MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIIC

Query:  IWSLSSFLM
        IWS+SSFLM
Subjt:  IWSLSSFLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAAAACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAA
ATCATGTTCATGGTCTGTTATTCAAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACATAACAGCTCAACTGGTGACAACACTTTCATTTACCATAAAAGGAGCTG
AAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGG
TTTTTCCCATCAACTGCTGCAACAGTGCATCGAATAGAGCGTTTTCAGAACATATTGCTCTATAACAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGATGATGT
TATGATAAAGGGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTAGTGTGGCCATGGACCGGCCCTGCAGCATCTGCAAAACTAGCACCTTACCTTGTTGGGATTGTTGTCCAATTTGCATTTGAACAGTATGCACGATGCAAGAA
ATCATGTTCATGGTCTGTTATTCAAATTGTCTTTCAAGTTTATAGATTGCATCAACTTAACATAACAGCTCAACTGGTGACAACACTTTCATTTACCATAAAAGGAGCTG
AAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTCGGTACACTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGTTTTCTTATGAGG
TTTTTCCCATCAACTGCTGCAACAGTGCATCGAATAGAGCGTTTTCAGAACATATTGCTCTATAACAGCAAGTTGAAATGCATGCTCATATGGGAATTTGTGGATGATGT
TATGATAAAGGGAGAATGA
Protein sequenceShow/hide protein sequence
MGLVWPWTGPAASAKLAPYLVGIVVQFAFEQYARCKKSCSWSVIQIVFQVYRLHQLNITAQLVTTLSFTIKGAEMTPNNLAINSSLGTLLNVLQCLGIICIWSLSSFLMR
FFPSTAATVHRIERFQNILLYNSKLKCMLIWEFVDDVMIKGE