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CSPI01G17850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G17850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:13386952..13387251
RNA-Seq ExpressionCSPI01G17850
SyntenyCSPI01G17850
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035100.1 hypothetical protein E6C27_scaffold57G001750 [Cucumis melo var. makuwa]7.7e-2780.41Show/hide
Query:  AAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL
        AAIHRFLLP+ALISLLLFSESL AISS+DH Q+SNR GDK S TSL  KI  KRGVRSGV AGRST+SSSA++ SSSFFNVGS+ICFNIAFV AMFL
Subjt:  AAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL

KAG6587814.1 hypothetical protein SDJN03_16379, partial [Cucurbita argyrosperma subsp. sororia]5.5e-0949.52Show/hide
Query:  LLPIALISLLLFSESLPAISSSDHIQD----------------SNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIA
        L PI LI LLL SES P +SS+D+ QD                 ++  DKD+G+SL EKISIKRG RS VI G S+ SSS+RV     FN+ SVICF  A
Subjt:  LLPIALISLLLFSESLPAISSSDHIQD----------------SNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIA

Query:  FVLAM
        F  A+
Subjt:  FVLAM

KGN65176.1 hypothetical protein Csa_019975 [Cucumis sativus]1.2e-40100Show/hide
Query:  MAAAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL
        MAAAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL
Subjt:  MAAAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL

TrEMBL top hitse value%identityAlignment
A0A0A0LYV9 Uncharacterized protein5.9e-41100Show/hide
Query:  MAAAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL
        MAAAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL
Subjt:  MAAAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL

A0A5D3BCG4 Uncharacterized protein3.7e-2780.41Show/hide
Query:  AAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL
        AAIHRFLLP+ALISLLLFSESL AISS+DH Q+SNR GDK S TSL  KI  KRGVRSGV AGRST+SSSA++ SSSFFNVGS+ICFNIAFV AMFL
Subjt:  AAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTGCAATTCACCGCTTCTTACTTCCGATTGCCCTTATTTCTCTTCTCCTTTTCTCTGAATCTCTCCCAGCTATCTCCTCTTCCGATCATATCCAGGATTCCAA
TCGGCCAGGGGACAAGGATTCCGGCACCTCCTTGACCGAAAAAATCAGTATCAAAAGAGGAGTTCGGTCCGGTGTAATTGCAGGTCGTTCGACTACATCGTCGTCCGCCC
GAGTGTCGTCGTCGTCGTTCTTTAATGTGGGCTCTGTGATTTGTTTCAACATAGCGTTTGTGCTTGCGATGTTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTGCAATTCACCGCTTCTTACTTCCGATTGCCCTTATTTCTCTTCTCCTTTTCTCTGAATCTCTCCCAGCTATCTCCTCTTCCGATCATATCCAGGATTCCAA
TCGGCCAGGGGACAAGGATTCCGGCACCTCCTTGACCGAAAAAATCAGTATCAAAAGAGGAGTTCGGTCCGGTGTAATTGCAGGTCGTTCGACTACATCGTCGTCCGCCC
GAGTGTCGTCGTCGTCGTTCTTTAATGTGGGCTCTGTGATTTGTTTCAACATAGCGTTTGTGCTTGCGATGTTCTTGTGA
Protein sequenceShow/hide protein sequence
MAAAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGVIAGRSTTSSSARVSSSSFFNVGSVICFNIAFVLAMFL