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CSPI01G18130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G18130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationChr1:13594365..13595491
RNA-Seq ExpressionCSPI01G18130
SyntenyCSPI01G18130
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146660.2 glycine-rich cell wall structural protein 2 [Cucumis sativus]2.8e-4996.73Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
        MASIKSLAIVVCLLLSFSAILSEGRVARKDLG+DLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNRNG    GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
Subjt:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
XP_008443813.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]4.7e-4491.5Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
        MASIKSLA+VVCLLLSFS  LSEGRVARKDLG+DLGG+GVGLG GIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNRNG    GSGYGGGSGR GGSN NGEGYGEGHGYGEG GYGGGN
Subjt:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
XP_022921881.1 cell wall protein IFF6-like isoform X1 [Cucurbita moschata]3.4e-3478.36Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY-----
        MASI SL IVVC LLSFS ILS+ RVARKDLGLDLGG+GVG+GTGIGLG+GGSGSGSGSGSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY     
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY-----

Query:  -----------AGSYAGSRAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
                   AGSYAGSRAGSGSG NRNG    GSGYGGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Subjt:  -----------AGSYAGSRAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
XP_022921883.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata]7.5e-3484.31Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
        MASI SL IVVC LLSFS ILS+ RVARKDLGLDLGG+GVG+GTGIGLG+GGSGSGSGSGSGSGSGSGSSSSSSS S SSSSGSG+G  AGS AGSYAGS
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
        RAGSGSG NRNG    GSGYGGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Subjt:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
XP_038879748.1 glycine-rich cell wall structural protein 2-like [Benincasa hispida]2.1e-3685.62Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
        MASIKSLA+VVC LLSFSAILSEGRVARKDLG+DLGGVGVGLG GIGLG+G    GSGSGSGSGSGS SSSSS S SSSSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGGNRNGGS----GYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
        RA  GSGGNRNGGS    GYGGGSGRGGG N  GEGYGEGHGYGEG GYGGGN
Subjt:  RAGSGSGGNRNGGS----GYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
TrEMBL top hitse value%identityAlignment
A0A0A0LTK9 Uncharacterized protein1.4e-4996.73Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
        MASIKSLAIVVCLLLSFSAILSEGRVARKDLG+DLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNRNG    GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
Subjt:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
A0A1S3B9N0 glycine-rich cell wall structural protein 2-like2.3e-4491.5Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
        MASIKSLA+VVCLLLSFS  LSEGRVARKDLG+DLGG+GVGLG GIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNRNG    GSGYGGGSGR GGSN NGEGYGEGHGYGEG GYGGGN
Subjt:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
A0A6J1C497 putative glycine-rich cell wall structural protein 13.4e-3280.13Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
        MA+I+  A+V  +L   +AI+SE RVARKDLG+DLGGVGVGLG GIGLG GGSGSGSG+G+GSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGGNR--NGGSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
        RAGSGSGGNR    GSGYGGGSGRG     +GEGYGEGHGYGEG GYGGGN
Subjt:  RAGSGSGGNR--NGGSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
A0A6J1E2L1 cell wall protein IFF6-like isoform X11.6e-3478.36Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY-----
        MASI SL IVVC LLSFS ILS+ RVARKDLGLDLGG+GVG+GTGIGLG+GGSGSGSGSGSGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY     
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY-----

Query:  -----------AGSYAGSRAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
                   AGSYAGSRAGSGSG NRNG    GSGYGGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Subjt:  -----------AGSYAGSRAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X33.6e-3484.31Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
        MASI SL IVVC LLSFS ILS+ RVARKDLGLDLGG+GVG+GTGIGLG+GGSGSGSGSGSGSGSGSGSSSSSSS S SSSSGSG+G  AGS AGSYAGS
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
        RAGSGSG NRNG    GSGYGGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Subjt:  RAGSGSGGNRNG----GSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein6.8e-1765.42Show/hide
Query:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS
        MA  + L ++  +++S   +L+E R+ARKDLG+DLGG+G+GLG G+G+G+GG GSGSG+G+GSGSGSGS SSSSS SSSSSS SG+G  AGS AGS+AGS
Subjt:  MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGS

Query:  RAGSGSG
        RAGSGSG
Subjt:  RAGSGSG
AT4G30460.1 glycine-rich protein2.0e-2165.33Show/hide
Query:  SLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSG---AGSEAGSYAGSYAGS--
        S  I++ L+L+ S ++SE RVARKDLGLDLGG+G G+G GIG+G GGSGSG+G+GSGSG G  SSSSSSS SSSSSSG G   AGSEAGSYAGS+AGS  
Subjt:  SLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSG---AGSEAGSYAGSYAGS--

Query:  --RAGSGSGGNRNGGSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGG
          R+GSG G    GG G+GGG G GGG    G G G G GYGEG GYGGG
Subjt:  --RAGSGSGGNRNGGSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATCAAGTCCCTTGCTATTGTTGTTTGCCTTCTACTCTCTTTTTCTGCCATTCTTTCTGAAGGTCGAGTGGCAAGAAAGGATCTCGGTCTTGACCTTGGAGG
AGTCGGAGTTGGACTTGGAACTGGAATTGGCTTAGGCATTGGTGGAAGTGGCTCTGGTTCTGGTTCTGGCTCTGGCTCTGGCTCTGGCTCTGGCTCAAGTTCATCCTCAT
CATCATACTCTTCGAGCTCAAGCTCGGGGTCTGGAGCTGGGTCTGAAGCTGGTTCTTACGCTGGATCATACGCAGGGTCACGAGCAGGCTCAGGTTCAGGTGGAAATAGG
AATGGAGGGTCAGGATATGGTGGAGGTTCGGGCAGAGGAGGAGGCAGCAACGACAATGGTGAAGGATATGGTGAAGGTCATGGCTACGGGGAGGGTCGTGGATATGGGGG
AGGAAACTGA
mRNA sequenceShow/hide mRNA sequence
TGGCACCTACCGGCCTCCACTTCAAATTAATAATATTAAAACATTTGTCCAAACGCCATAATCTTCAAACAATTTTGGGCAAATTCTTAGCCACATAATTTGCCCTCCGC
AATCTTTTTCTCTCTTTTGTAGTGGCCACTTCATCGTACCATTTCACAAAGGGTCCTATCATCTTCAACAAATTTTGCTATAAATACCTCCCTCAAGTCTCTCCATTAAT
TCCCACATCACAAACCTTTTAAACTCTAAAACCTAGAGAAGCTTTAACACAGTCCCCCGATTGTTTTATTCTGTTTAAAACAATAATGGCTTCAATCAAGTCCCTTGCTA
TTGTTGTTTGCCTTCTACTCTCTTTTTCTGCCATTCTTTCTGAAGGTCGAGTGGCAAGAAAGGATCTCGGTCTTGACCTTGGAGGAGTCGGAGTTGGACTTGGAACTGGA
ATTGGCTTAGGCATTGGTGGAAGTGGCTCTGGTTCTGGTTCTGGCTCTGGCTCTGGCTCTGGCTCTGGCTCAAGTTCATCCTCATCATCATACTCTTCGAGCTCAAGCTC
GGGGTCTGGAGCTGGGTCTGAAGCTGGTTCTTACGCTGGATCATACGCAGGGTCACGAGCAGGCTCAGGTTCAGGTGGAAATAGGAATGGAGGGTCAGGATATGGTGGAG
GTTCGGGCAGAGGAGGAGGCAGCAACGACAATGGTGAAGGATATGGTGAAGGTCATGGCTACGGGGAGGGTCGTGGATATGGGGGAGGAAACTGAAGAGAGAGAAAAAAA
AAAAAAGATAAGAGGACGTATAAGAAAAGTATTAGGTTACGTAGTTGATTTAGGTCATGATCCTAACTTTATGTATTTAAATAAAAATAAGGGAAGATGGAAGCTTGTTT
AGTAGTGTGTGTTTTAGCGGTCATGAAAATATTGTTGGTAGAACAAGTGTGATGGATTTTCATGGTGTTTCTTGTTTTTAGCCAATTTCATGTGTATGTTAATGTTTTAC
TATATATTATATGCTTAAATATAGTTTTCTTTTTAAATCTCCCCTATATTGTTTTCACACTATAAATAAAATAAAATGTTGGTTAATATTTTCTTTTATATATCCTAAAC
TTGTAATTAACACATGTGATCACATAA
Protein sequenceShow/hide protein sequence
MASIKSLAIVVCLLLSFSAILSEGRVARKDLGLDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNR
NGGSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN