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CSPI01G18160 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G18160
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationChr1:13626055..13626423
RNA-Seq ExpressionCSPI01G18160
SyntenyCSPI01G18160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443812.1 PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo]1.6e-2875Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS------------------SYAGSYVGSG
        MASIR VAVVTFLLGVSVIVSESRVARKDLGLDLGG+GLGVGTG+GLGL   GSGSG GSG GSSSASSSHS                  SYAGS  GSG
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS------------------SYAGSYVGSG

Query:  SGRNRNGGSGSGSGRGNGGE------GYGEGHGYGNGGEN
        SGRNRNGGSGSGSG GNGGE      GYGEGHGYGNGGEN
Subjt:  SGRNRNGGSGSGSGRGNGGE------GYGEGHGYGNGGEN

XP_011656035.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]1.4e-4099.14Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHSSYAGSYVGSGSGRNRNGGSGSGSGRGNG
        MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSAS SHSSYAGSYVGSGSGRNRNGGSGSGSGRGNG
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHSSYAGSYVGSGSGRNRNGGSGSGSGRGNG

Query:  GEGYGEGHGYGNGGEN
        GEGYGEGHGYGNGGEN
Subjt:  GEGYGEGHGYGNGGEN

XP_022921883.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata]1.5e-2164.08Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS--------------------SYAGSYVG
        MASI S+ VV FLL  SVI+S++RVARKDLGLDLGG+G+G+GTG+GLGLGGSGSGSGSGSGSGS S SSS S                    SYAGS  G
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS--------------------SYAGSYVG

Query:  SGSGRNRNGGSGSGSGRG---------NGGEGYGEGHGYGNG
        SGSG NRNGGSGSGSG G          GGEGYGEGHGYG G
Subjt:  SGSGRNRNGGSGSGSGRG---------NGGEGYGEGHGYGNG

XP_022921884.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]3.4e-2668.03Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLG----GSGSGSGSGSGSGSSSASSSHS--------------SYAGSYVGSG
        MASIR+V+++  LL +SVIVSESRVAR DLGLDLGGVG+G+GTG+GLGLG    GSGSGSGSGSGSGSSSASSSHS              SYAGSY GSG
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLG----GSGSGSGSGSGSGSSSASSSHS--------------SYAGSYVGSG

Query:  SGRNRNGGSGSGSGRGN-------------GGEGYGEGHGYGNGGEN
        SGRNRNGGSGSGSG G+             GGEGYGEGHGYGN GEN
Subjt:  SGRNRNGGSGSGSGRGN-------------GGEGYGEGHGYGNGGEN

XP_038879815.1 putative per-hexamer repeat protein 5 [Benincasa hispida]1.3e-2567.55Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLG----GSGSGSGSGSGSGSSSASSSHS------------------SYAGSY
        MASIR+V ++ FLLGVSVIVSE RVAR +LGLDLGGVGLGVGTG+GLGLG    GSGSGSGSGSGSGSSSASSSHS                  SYAGS 
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLG----GSGSGSGSGSGSGSSSASSSHS------------------SYAGSY

Query:  VGSGSGRNRNGGSGSGSGRGNG-------------GEGYGEGHGYGNGGEN
         GSGSGRNRNGGSGSGSG G G             G GYGEGHGYGNGGEN
Subjt:  VGSGSGRNRNGGSGSGSGRGNG-------------GEGYGEGHGYGNGGEN

TrEMBL top hitse value%identityAlignment
A0A0A0LZ57 Uncharacterized protein6.9e-4199.14Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHSSYAGSYVGSGSGRNRNGGSGSGSGRGNG
        MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSAS SHSSYAGSYVGSGSGRNRNGGSGSGSGRGNG
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHSSYAGSYVGSGSGRNRNGGSGSGSGRGNG

Query:  GEGYGEGHGYGNGGEN
        GEGYGEGHGYGNGGEN
Subjt:  GEGYGEGHGYGNGGEN

A0A1S3B8Y8 putative glycine-rich cell wall structural protein 18.0e-2975Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS------------------SYAGSYVGSG
        MASIR VAVVTFLLGVSVIVSESRVARKDLGLDLGG+GLGVGTG+GLGL   GSGSG GSG GSSSASSSHS                  SYAGS  GSG
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS------------------SYAGSYVGSG

Query:  SGRNRNGGSGSGSGRGNGGE------GYGEGHGYGNGGEN
        SGRNRNGGSGSGSG GNGGE      GYGEGHGYGNGGEN
Subjt:  SGRNRNGGSGSGSGRGNGGE------GYGEGHGYGNGGEN

A0A6J1E1T0 glycine-rich cell wall structural protein 2-like1.7e-2668.03Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLG----GSGSGSGSGSGSGSSSASSSHS--------------SYAGSYVGSG
        MASIR+V+++  LL +SVIVSESRVAR DLGLDLGGVG+G+GTG+GLGLG    GSGSGSGSGSGSGSSSASSSHS              SYAGSY GSG
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLG----GSGSGSGSGSGSGSSSASSSHS--------------SYAGSYVGSG

Query:  SGRNRNGGSGSGSGRGN-------------GGEGYGEGHGYGNGGEN
        SGRNRNGGSGSGSG G+             GGEGYGEGHGYGN GEN
Subjt:  SGRNRNGGSGSGSGRGN-------------GGEGYGEGHGYGNGGEN

A0A6J1E2L1 cell wall protein IFF6-like isoform X11.5e-1956.17Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS----------------------------
        MASI S+ VV FLL  SVI+S++RVARKDLGLDLGG+G+G+GTG+GLGLGGSGSGSGSGSGSGS S SSS S                            
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS----------------------------

Query:  ------------SYAGSYVGSGSGRNRNGGSGSGSGRG---------NGGEGYGEGHGYGNG
                    SYAGS  GSGSG NRNGGSGSGSG G          GGEGYGEGHGYG G
Subjt:  ------------SYAGSYVGSGSGRNRNGGSGSGSGRG---------NGGEGYGEGHGYGNG

A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X37.2e-2264.08Show/hide
Query:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS--------------------SYAGSYVG
        MASI S+ VV FLL  SVI+S++RVARKDLGLDLGG+G+G+GTG+GLGLGGSGSGSGSGSGSGS S SSS S                    SYAGS  G
Subjt:  MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHS--------------------SYAGSYVG

Query:  SGSGRNRNGGSGSGSGRG---------NGGEGYGEGHGYGNG
        SGSG NRNGGSGSGSG G          GGEGYGEGHGYG G
Subjt:  SGSGRNRNGGSGSGSGRG---------NGGEGYGEGHGYGNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein3.7e-1056.7Show/hide
Query:  FLLGVSVI-----VSESRVARKDLGLDLGGVGLGVGTGMGLGLG---GSGSGSGSGSGSGSSSASSSHSSYAGSYVGSGSGRNRNGGSGSGSGRGNG
        FLLG+ VI     ++ESR+ARKDLG+DLGG+G+G+G G+G+GLG   GSG+G+GSGSGSGS S+SSS SS + S  GSG     + GS +GS  G+G
Subjt:  FLLGVSVI-----VSESRVARKDLGLDLGGVGLGVGTGMGLGLG---GSGSGSGSGSGSGSSSASSSHSSYAGSYVGSGSGRNRNGGSGSGSGRGNG

AT4G30460.1 glycine-rich protein3.8e-1552.7Show/hide
Query:  SVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSG---------SSSASSSHS------------SYAGSYVG----
        S+ ++T +L  SV+VSESRVARKDLGLDLGG+G G+G G+G+G GGSGSG+G+GSGSG         SSS+SSS S            SYAGS+ G    
Subjt:  SVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSG---------SSSASSSHS------------SYAGSYVG----

Query:  --SGSGRNR--------NGGSGSGSGRGNG-----GEGYGEGHGYGNG
          SGSGR R         GG G G GRG G     GEGYGEG GYG G
Subjt:  --SGSGRNR--------NGGSGSGSGRGNG-----GEGYGEGHGYGNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTAGGAGTGTTGCCGTTGTCACTTTTCTACTTGGCGTGTCCGTTATTGTATCAGAAAGCCGCGTGGCTAGAAAAGACTTGGGCCTCGACCTTGGGGGAGT
GGGCCTTGGTGTTGGAACGGGAATGGGCTTGGGCTTAGGTGGAAGTGGGTCCGGGTCCGGTTCTGGGTCTGGGTCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAT
ACGCTGGCTCTTATGTCGGATCTGGTTCAGGCAGAAACAGGAACGGGGGGTCCGGTTCCGGTTCAGGGAGGGGAAACGGTGGAGAAGGATACGGCGAGGGTCATGGTTAT
GGCAATGGCGGCGAAAACTAA
mRNA sequenceShow/hide mRNA sequence
CTTAGCAATCAAACAAATATGGCTTCCATTAGGAGTGTTGCCGTTGTCACTTTTCTACTTGGCGTGTCCGTTATTGTATCAGAAAGCCGCGTGGCTAGAAAAGACTTGGG
CCTCGACCTTGGGGGAGTGGGCCTTGGTGTTGGAACGGGAATGGGCTTGGGCTTAGGTGGAAGTGGGTCCGGGTCCGGTTCTGGGTCTGGGTCTGGGTCCAGTTCTGCTT
CCTCATCACACTCCTCATACGCTGGCTCTTATGTCGGATCTGGTTCAGGCAGAAACAGGAACGGGGGGTCCGGTTCCGGTTCAGGGAGGGGAAACGGTGGAGAAGGATAC
GGCGAGGGTCATGGTTATGGCAATGGCGGCGAAAACTAA
Protein sequenceShow/hide protein sequence
MASIRSVAVVTFLLGVSVIVSESRVARKDLGLDLGGVGLGVGTGMGLGLGGSGSGSGSGSGSGSSSASSSHSSYAGSYVGSGSGRNRNGGSGSGSGRGNGGEGYGEGHGY
GNGGEN