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CSPI01G18460 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G18460
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr1:13894907..13895978
RNA-Seq ExpressionCSPI01G18460
SyntenyCSPI01G18460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589876.1 hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sororia]6.5e-4779.07Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKT---SSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMT
        MAT+L TF P  IRACASSA    DH+RRKT   SSSSNWWAPVFGWSSEPDYIDSGNK+ P+NLA G SK D ETKS R RFSPGCFTE+KARQLR+MT
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKT---SSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMT

Query:  TETESFHDVMYHSAIASRLASDFKSREDS
         ETESFHDVMYHSAIASRLA+DFKSR DS
Subjt:  TETESFHDVMYHSAIASRLASDFKSREDS

XP_011656185.1 uncharacterized protein LOC105435656 [Cucumis sativus]7.7e-6499.21Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNLLTFPPAGIRACASSAD RSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLASDFKSREDS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

XP_016903293.1 PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo]1.0e-5589.76Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE
        MATNLLTF PAGIRACA+SAD RSD +RRK SSS+NWWAPVFGWSSEPDYIDS  NKAEPQNLAG +SKPDLETKS+RGRFSPGCFTEAKARQLRMMTTE
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE

Query:  TESFHDVMYHSAIASRLASDFKSREDS
        TESFHDVMYHSAIASRLASDFKSR DS
Subjt:  TESFHDVMYHSAIASRLASDFKSREDS

XP_022960569.1 uncharacterized protein LOC111461308 [Cucurbita moschata]1.0e-4778.57Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNL TF P  IRACASSADH    +   +SSSSNWWAPVFGWSSEPDYIDSGNK+ P+NLA G SK D ETKS R RFSPGCFTE+KARQLR+MT ET
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLA+DFKSR DS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

XP_038880363.1 uncharacterized protein LOC120072011 [Benincasa hispida]2.4e-5790.48Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNLLTFPPAGIRACA+SAD RSDH+RRKTSSSSNWWAPVFGWSSEPDYIDS NKAEPQ+LAGG SK D ETKS+R RFSPGCFTEAKARQLRMMTTET
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLASDFK+R DS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

TrEMBL top hitse value%identityAlignment
A0A0A0LTN7 Uncharacterized protein3.7e-6499.21Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNLLTFPPAGIRACASSAD RSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLASDFKSREDS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

A0A1S4E4Y4 uncharacterized protein LOC1035027474.9e-5689.76Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE
        MATNLLTF PAGIRACA+SAD RSD +RRK SSS+NWWAPVFGWSSEPDYIDS  NKAEPQNLAG +SKPDLETKS+RGRFSPGCFTEAKARQLRMMTTE
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE

Query:  TESFHDVMYHSAIASRLASDFKSREDS
        TESFHDVMYHSAIASRLASDFKSR DS
Subjt:  TESFHDVMYHSAIASRLASDFKSREDS

A0A5D3CSV6 Uncharacterized protein4.9e-5689.76Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE
        MATNLLTF PAGIRACA+SAD RSD +RRK SSS+NWWAPVFGWSSEPDYIDS  NKAEPQNLAG +SKPDLETKS+RGRFSPGCFTEAKARQLRMMTTE
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE

Query:  TESFHDVMYHSAIASRLASDFKSREDS
        TESFHDVMYHSAIASRLASDFKSR DS
Subjt:  TESFHDVMYHSAIASRLASDFKSREDS

A0A6J1HBD8 uncharacterized protein LOC1114613084.9e-4878.57Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNL TF P  IRACASSADH    +   +SSSSNWWAPVFGWSSEPDYIDSGNK+ P+NLA G SK D ETKS R RFSPGCFTE+KARQLR+MT ET
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLA+DFKSR DS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

A0A6J1JBM9 uncharacterized protein LOC1114853091.0e-4578.74Show/hide
Query:  MATNLLTFPPAGIRACASSADHRSDHSRRKT-SSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE
        MATNL TF P  IRACASSA    DH+RRKT SSSSNWWAPVFGWSSEPDYIDS NK+ P+  A G SK D ETKS R RFSPGCFTE+KARQLR+MT E
Subjt:  MATNLLTFPPAGIRACASSADHRSDHSRRKT-SSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE

Query:  TESFHDVMYHSAIASRLASDFKSREDS
        TESFHDVMYHSAIASRLA+DFKSR DS
Subjt:  TESFHDVMYHSAIASRLASDFKSREDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52720.1 unknown protein4.7e-1948.21Show/hide
Query:  IRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRG-RFSPGCFTEAKARQLRMMTTETESFHDVMYHSA
        IRA + S     D +R+K   S+ WWAP+FG  S+PDY++  +     N       PD    S  G +F  GCFTE KA+QLR  T E  +FHDVMYHSA
Subjt:  IRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRG-RFSPGCFTEAKARQLRMMTTETESFHDVMYHSA

Query:  IASRLASDFKSR
        IASRLASD   R
Subjt:  IASRLASDFKSR

AT3G15630.1 unknown protein8.0e-1949.52Show/hide
Query:  ADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD
        A   SD +R+K  SS +WWAP+FG SSEPDY++     E       S     E +SLR      C TE KA+QLR  T E  +FHDVMYHSAIASRLASD
Subjt:  ADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD

Query:  FKSRE
         + ++
Subjt:  FKSRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTAATCTCCTCACTTTCCCCCCTGCCGGAATCCGTGCCTGTGCCTCCTCCGCCGACCACCGCTCAGACCATAGCCGTCGCAAAACCTCATCCTCTTCCAACTG
GTGGGCCCCCGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGGCAACAAGGCTGAACCTCAGAACCTTGCCGGCGGTTCTTCCAAGCCAGATCTGGAGACGA
AATCCCTCAGGGGTCGATTTTCCCCTGGATGCTTCACGGAAGCGAAGGCTCGGCAGCTGCGAATGATGACGACGGAAACGGAGTCGTTTCACGACGTTATGTACCACTCG
GCCATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGCGAAGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
AGATTAGAGAATAAAAAAAAAGGACGAAATTATATAATATATAACATATTGAAATTGGATAAGTAATTATATGTAGGTGCGTATGCGTGTGATCTACATACATTGGTGAT
ATGATTAAACTTGTTGGGGGTGGCCACGAAAGCATGTAACCTAAATAACCGGTAAAAAGTGGACGATAAAGCACACCTCTACCCCACGCGTCTTTAAAGGCCAAACCGCC
ACGTGTCCGCTCTTATCCGTTCACAGTTTCTTCCATTTTTAAATCCCCACCCAAAAGGTACTCTAAAAAAGCAACACCCTATTTCCTCTCTTTCTCTACAAACCACCTTC
CCATCCTCTCTCTCTCTCTCTAAAATGGCCACTAATCTCCTCACTTTCCCCCCTGCCGGAATCCGTGCCTGTGCCTCCTCCGCCGACCACCGCTCAGACCATAGCCGTCG
CAAAACCTCATCCTCTTCCAACTGGTGGGCCCCCGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGGCAACAAGGCTGAACCTCAGAACCTTGCCGGCGGTT
CTTCCAAGCCAGATCTGGAGACGAAATCCCTCAGGGGTCGATTTTCCCCTGGATGCTTCACGGAAGCGAAGGCTCGGCAGCTGCGAATGATGACGACGGAAACGGAGTCG
TTTCACGACGTTATGTACCACTCGGCCATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGCGAAGATTCTTGATCCGGCGGCCGCTCATCCCTCTTATTTACTACTTT
GCAATTATGTACGTTGAATGTTGTATAAATGAAACGCAAATTTCAGGGATAAAGAGTTGTAAACTCTTCTTTTTCTGTTTTTTCTTTTTAAATTCTGATCTTCAATCGTG
GGTTTGGGAGGTTTAATTTTATTGAAGAAAGAAGAAGAAGATGTTGATGTAATTATAAATGTATTAAATTAACTTTTAAATTGGGGTCCAGCTGCCCACCATGACGTGGC
ATTCTTAAATAAGTGATTAATTTGAGGTTATGGGATGTAAGCACTGATCACCAATTTCATTAGGGTACAACAATTTGAGGGC
Protein sequenceShow/hide protein sequence
MATNLLTFPPAGIRACASSADHRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHS
AIASRLASDFKSREDS