; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI01G18480 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G18480
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGTP-binding nuclear protein
Genome locationChr1:13913662..13914740
RNA-Seq ExpressionCSPI01G18480
SyntenyCSPI01G18480
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR002041 - Ran GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGG87103.1 GTP-binding nuclear protein Ran3A-6a [Musa AB Group]1.1e-5285.59Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFRDPNIHFVESPALAPPEQQIHLAAQQQHEVEL
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL RDPN+HFVESPALAPPE QI LAAQQQHE EL
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFRDPNIHFVESPALAPPEQQIHLAAQQQHEVEL

Query:  AAAAAASQPLLGDHDDAF
        AAAAA  QPL  D DD F
Subjt:  AAAAAASQPLLGDHDDAF

GER33102.1 GTP-binding nuclear protein Ran [Striga asiatica]6.5e-4868.71Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-----------------------------DP
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                             DP
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-----------------------------DP

Query:  NIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF
        N+HFVESPALAPPE  I LAAQQQHE EL  AAAASQPL  D DDAF
Subjt:  NIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF

KAG5030977.1 hypothetical protein JHK85_014959 [Glycine max]3.0e-4561.88Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  ----------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
                  D N+HFVESPALAPPE QI LAAQQQHE EL   AAASQPL  D DD F+
Subjt:  ----------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

KDO80343.1 hypothetical protein CISIN_1g027593mg [Citrus sinensis]1.4e-4557.22Show/hide
Query:  ATIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR------------------------------
        ATIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                              
Subjt:  ATIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR------------------------------

Query:  ------------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
                                      DPN+HFVESPALAPPE QI LAAQQQHE EL  AAAASQPL  D DDAF+
Subjt:  ------------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

PIA65484.1 hypothetical protein AQUCO_00100764v1 [Aquilegia coerulea]4.5e-4972.46Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLF-------------------RDPNIHFVESPAL
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL                    RDPN+HFVESPAL
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLF-------------------RDPNIHFVESPAL

Query:  APPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
        APPE QI LAAQQQHE EL  AAAA+QPL  D DD F+
Subjt:  APPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

TrEMBL top hitse value%identityAlignment
A0A067GKU8 GTP-binding nuclear protein6.6e-4657.22Show/hide
Query:  ATIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR------------------------------
        ATIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                              
Subjt:  ATIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR------------------------------

Query:  ------------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
                                      DPN+HFVESPALAPPE QI LAAQQQHE EL  AAAASQPL  D DDAF+
Subjt:  ------------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

A0A1S3U4N6 GTP-binding nuclear protein1.9e-4556.98Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
                                     DPN+HFVESPALAPPE QI LAAQQQHE EL  AAAASQPL  D DDAF+
Subjt:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

A0A2G5FBU7 GTP-binding nuclear protein2.2e-4972.46Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLF-------------------RDPNIHFVESPAL
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL                    RDPN+HFVESPAL
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLF-------------------RDPNIHFVESPAL

Query:  APPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
        APPE QI LAAQQQHE EL  AAAA+QPL  D DD F+
Subjt:  APPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

A0A5A7PKG5 GTP-binding nuclear protein3.1e-4868.71Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-----------------------------DP
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                             DP
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-----------------------------DP

Query:  NIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF
        N+HFVESPALAPPE  I LAAQQQHE EL  AAAASQPL  D DDAF
Subjt:  NIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF

M4NCI5 GTP-binding nuclear protein5.5e-5385.59Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFRDPNIHFVESPALAPPEQQIHLAAQQQHEVEL
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL RDPN+HFVESPALAPPE QI LAAQQQHE EL
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFRDPNIHFVESPALAPPEQQIHLAAQQQHEVEL

Query:  AAAAAASQPLLGDHDDAF
        AAAAA  QPL  D DD F
Subjt:  AAAAAASQPLLGDHDDAF

SwissProt top hitse value%identityAlignment
P41917 GTP-binding nuclear protein Ran-29.1e-4553.63Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
                                     D N+HFVESPALAPPE  + +AAQQQ+E +LAAAAA  QPL  D DDAF+
Subjt:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

P41918 GTP-binding nuclear protein Ran-A17.5e-4756.18Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF
                                     DPN+HFVESPALAPPE QI LAAQQQHE EL  AAAASQPL  D D+ F
Subjt:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF

P54765 GTP-binding nuclear protein Ran1A (Fragment)3.3e-4756.74Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF
                                     DPN+HFVESPALAPPE QI LAAQQQHE EL  A AASQPL  D DDAF
Subjt:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF

P54766 GTP-binding nuclear protein Ran1B (Fragment)8.8e-4857.3Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF
                                     DPN+HFVESPALAPPE QI LAAQQQHE EL  AAAASQPL  D DDAF
Subjt:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAF

Q8H156 GTP-binding nuclear protein Ran-31.3e-4655.87Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
                                     D N+HFVESPALAPPE QI LAAQQQHE EL  AAAASQPL  D DD F+
Subjt:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

Arabidopsis top hitse value%identityAlignment
AT4G18800.1 RAB GTPase homolog A1D1.1e-0836.71Show/hide
Query:  ELLATIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDL--FRDPNI
        E  +TIGVE        N   ++   WDTAGQE++  +   YY     A++++DVT    + NV  W R+L    DPNI
Subjt:  ELLATIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDL--FRDPNI

AT5G20010.1 RAS-related nuclear protein-13.0e-4351.4Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
                                     D N+HFVE+PALAPPE  I +A QQ++E EL  AAA  QPL  D DD F+
Subjt:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

AT5G20020.1 RAS-related GTP-binding nuclear protein 26.5e-4653.63Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
                                     D N+HFVESPALAPPE  + +AAQQQ+E +LAAAAA  QPL  D DDAF+
Subjt:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK

AT5G55080.1 ras-related nuclear protein 42.0e-2668.12Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR
        T+GV+++PLDFFTN GK+RF CWDTAGQEK+ GL+D YYIH QCAIIMFDVT +  Y N+  W+RDL R
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR

AT5G55190.1 RAN GTPase 39.0e-4855.87Show/hide
Query:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------
        TIGVEVHPLDFFTNCGK+RFYCWDTAGQEKFGGLRDGYYIH QCAIIMFDVT +L Y+NVPTWHRDL R                               
Subjt:  TIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFR-------------------------------

Query:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK
                                     D N+HFVESPALAPPE QI LAAQQQHE EL  AAAASQPL  D DD F+
Subjt:  -----------------------------DPNIHFVESPALAPPEQQIHLAAQQQHEVELAAAAAASQPLLGDHDDAFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAACACCTTATAGTTATGAATTTGTTCTGTTTCTTTGAACTTTTAGCGACCATTGGTGTGGAGGTTCACCCATTGGACTTCTTCACAAACTGTGGAAAAGTTAG
ATTTTACTGTTGGGACACTGCTGGGCAGGAGAAATTTGGTGGTCTACGTGATGGCTACTACATCCACAGGCAATGCGCAATCATCATGTTTGACGTTACTACCAAATTGG
CATATAGAAATGTTCCCACGTGGCATCGTGATCTTTTCAGGGATCCTAACATTCATTTTGTTGAATCTCCTGCTCTTGCTCCTCCAGAACAACAAATTCACTTGGCTGCC
CAGCAACAACATGAAGTTGAATTAGCAGCAGCAGCAGCAGCAAGTCAACCTCTTCTCGGTGACCACGATGATGCTTTCAAGTATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAACACCTTATAGTTATGAATTTGTTCTGTTTCTTTGAACTTTTAGCGACCATTGGTGTGGAGGTTCACCCATTGGACTTCTTCACAAACTGTGGAAAAGTTAG
ATTTTACTGTTGGGACACTGCTGGGCAGGAGAAATTTGGTGGTCTACGTGATGGCTACTACATCCACAGGCAATGCGCAATCATCATGTTTGACGTTACTACCAAATTGG
CATATAGAAATGTTCCCACGTGGCATCGTGATCTTTTCAGGGATCCTAACATTCATTTTGTTGAATCTCCTGCTCTTGCTCCTCCAGAACAACAAATTCACTTGGCTGCC
CAGCAACAACATGAAGTTGAATTAGCAGCAGCAGCAGCAGCAAGTCAACCTCTTCTCGGTGACCACGATGATGCTTTCAAGTATAAATGA
Protein sequenceShow/hide protein sequence
MNKHLIVMNLFCFFELLATIGVEVHPLDFFTNCGKVRFYCWDTAGQEKFGGLRDGYYIHRQCAIIMFDVTTKLAYRNVPTWHRDLFRDPNIHFVESPALAPPEQQIHLAA
QQQHEVELAAAAAASQPLLGDHDDAFKYK