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CSPI01G18520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI01G18520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein
Genome locationChr1:13955064..13955522
RNA-Seq ExpressionCSPI01G18520
SyntenyCSPI01G18520
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046741.1 hypothetical protein E6C27_scaffold216G00220 [Cucumis melo var. makuwa]2.3e-3295Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST
        MYRSSSTSRSF+EFSVDLLPDSISSPPLKNEAS VLPLFKSNSDAKKEMG QFKSPG NAVHLIPLTLFLCALILWVCST
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST

KAE8653076.1 hypothetical protein Csa_019861 [Cucumis sativus]1.2e-52100Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTSFEPALDFMVFMQSQACLKR
        MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTSFEPALDFMVFMQSQACLKR
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTSFEPALDFMVFMQSQACLKR

Query:  PFKNFSKD
        PFKNFSKD
Subjt:  PFKNFSKD

KAG6587911.1 hypothetical protein SDJN03_16476, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1766.67Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEA-SGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST
        M+RSSSTSR+F+E+SVD+ P   SSPPLKNEA   +LPLFK ++  KKEMG  FK PG+NAVHLIPL L L ALILW+CS+
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEA-SGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST

KAG7021797.1 hypothetical protein SDJN02_15525, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1766.67Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEA-SGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST
        M+RSSSTSR+F+E+SVD+ P   SSPPLKNEA   +LPLFK ++  KKEMG  FK PG+NAVHLIPL L L ALILW+CS+
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEA-SGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST

RVW47477.1 hypothetical protein CK203_086512 [Vitis vinifera]7.4e-1560Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDA-KKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTSFEP
        MYRS+STSR+ +EF V+LLP ++ S PLK  AS  LP++   SDA KKEM    KS GENA+HLIPL L LCALILWV S    P
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDA-KKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTSFEP

TrEMBL top hitse value%identityAlignment
A0A0A0LTP3 Uncharacterized protein1.8e-35100Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST
        MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST

A0A438EIF2 Uncharacterized protein3.6e-1560Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDA-KKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTSFEP
        MYRS+STSR+ +EF V+LLP ++ S PLK  AS  LP++   SDA KKEM    KS GENA+HLIPL L LCALILWV S    P
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDA-KKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTSFEP

A0A5A7TZH0 Uncharacterized protein1.1e-3295Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST
        MYRSSSTSRSF+EFSVDLLPDSISSPPLKNEAS VLPLFKSNSDAKKEMG QFKSPG NAVHLIPLTLFLCALILWVCST
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCST

A0A6A1V842 Uncharacterized protein9.7e-1354.88Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDA-KKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTS
        MYRSSSTSR+ +EF V+L+P  + SPP K  +S  LP++ S  DA KKE+    +SPGE  +HLIPL L LC LILW+ S S
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDA-KKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTS

A0A7N2L1G1 Uncharacterized protein2.2e-1256.41Show/hide
Query:  RSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDA-KKEMGSQFKSPGENAVHLIPLTLFLCALILWVCS
        RSSSTSR+ +EF V+LLP ++ SPPLK   S  LP++ S SDA KK++    KS GENA+H+IPL L LC  ILW+ S
Subjt:  RSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDA-KKEMGSQFKSPGENAVHLIPLTLFLCALILWVCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35658.1 unknown protein2.3e-0639.29Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASG-----VLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCS
        M RS+S S   ++ S +    S S P +K  A       +LP +  NS   K+  S+F+S  ENA+H IP+ L LCA+ILW+ S
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASG-----VLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCS

AT2G35658.2 unknown protein2.3e-0639.29Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASG-----VLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCS
        M RS+S S   ++ S +    S S P +K  A       +LP +  NS   K+  S+F+S  ENA+H IP+ L LCA+ILW+ S
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASG-----VLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCS

AT2G35658.3 unknown protein2.3e-0639.29Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASG-----VLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCS
        M RS+S S   ++ S +    S S P +K  A       +LP +  NS   K+  S+F+S  ENA+H IP+ L LCA+ILW+ S
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASG-----VLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCS

AT4G16840.1 unknown protein5.1e-0639.76Show/hide
Query:  MYRSSSTSRSFNEFSVDLL--PDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTS
        M RS+S SR  + F       P S S   ++++   +LP +  NS A K   S+F+   EN +HLIPL L LC  ILW+ S S
Subjt:  MYRSSSTSRSFNEFSVDLL--PDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTS

AT5G20045.1 unknown protein2.8e-0437.65Show/hide
Query:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEM---GSQFKSP-GENAVHLIPLTLFLCALILWVCSTS
        M R   +SR   EF ++L  DS S             L   +  AKKE+    + +KS  GE A+HLIP+ LFLC  +LWV S++
Subjt:  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEM---GSQFKSP-GENAVHLIPLTLFLCALILWVCSTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAGGTCTTCAAGCACTTCTCGGAGCTTTAATGAATTCTCGGTTGACTTGCTGCCAGATTCTATAAGCTCCCCACCATTGAAGAATGAAGCTTCTGGTGTTTTGCC
CTTGTTTAAGAGTAATAGTGACGCCAAGAAAGAAATGGGGTCGCAATTTAAGTCTCCAGGAGAAAATGCAGTTCATTTAATCCCTCTTACTTTGTTTCTTTGTGCTTTAA
TCCTCTGGGTTTGTTCAACCAGCTTTGAACCTGCGTTGGATTTTATGGTTTTCATGCAATCACAAGCTTGTTTGAAACGACCTTTTAAGAACTTTTCTAAAGACTAA
mRNA sequenceShow/hide mRNA sequence
CCATAACAGTACTTCTCATTCAGAATGTATAGGTCTTCAAGCACTTCTCGGAGCTTTAATGAATTCTCGGTTGACTTGCTGCCAGATTCTATAAGCTCCCCACCATTGAA
GAATGAAGCTTCTGGTGTTTTGCCCTTGTTTAAGAGTAATAGTGACGCCAAGAAAGAAATGGGGTCGCAATTTAAGTCTCCAGGAGAAAATGCAGTTCATTTAATCCCTC
TTACTTTGTTTCTTTGTGCTTTAATCCTCTGGGTTTGTTCAACCAGCTTTGAACCTGCGTTGGATTTTATGGTTTTCATGCAATCACAAGCTTGTTTGAAACGACCTTTT
AAGAACTTTTCTAAAGACTAA
Protein sequenceShow/hide protein sequence
MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENAVHLIPLTLFLCALILWVCSTSFEPALDFMVFMQSQACLKRPFKNFSKD